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ONTOLOGY REPORT - ANNOTATIONS


Term:2'-deoxycytidine
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Accession:CHEBI:15698 term browser browse the term
Definition:A pyrimidine 2'-deoxyribonucleoside having cytosine as the nucleobase.
Synonyms:related_synonym: 4-amino-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl]pyrimidin-2(1H)-one;   Deoxycytidine;   Formula=C9H13N3O4;   InChI=1S/C9H13N3O4/c10-7-1-2-12(9(15)11-7)8-3-5(14)6(4-13)16-8/h1-2,5-6,8,13-14H,3-4H2,(H2,10,11,15)/t5-,6+,8+/m0/s1;   InChIKey=CKTSBUTUHBMZGZ-SHYZEUOFSA-N;   SMILES=Nc1ccn([C@H]2C[C@H](O)[C@@H](CO)O2)c(=O)n1;   dC;   dCYD
 alt_id: CHEBI:19240;   CHEBI:41417;   CHEBI:41430;   CHEBI:41806;   CHEBI:4407
 xref: Beilstein:87567 "Beilstein";   CAS:951-77-9 "ChemIDplus";   CAS:951-77-9 "KEGG COMPOUND";   CAS:951-77-9 "NIST Chemistry WebBook";   DrugBank:DB02594;   Gmelin:1321747 "Gmelin";   HMDB:HMDB0000014;   KEGG:C00881
 xref_mesh: MESH:D003841
 xref: MetaCyc:DEOXYCYTIDINE;   PDBeChem:DCZ;   PMID:15778433 "Europe PMC";   Reaxys:87567 "Reaxys";   Wikipedia:Deoxycytidine


show annotations for term's descendants       view all columns           Sort by:
 
2'-deoxycytidine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:6480464
G Dck deoxycytidine kinase JBrowse link 14 20,935,442 20,952,939 RGD:6480464
G Slc28a1 solute carrier family 28 member 1 JBrowse link 1 142,948,942 142,992,410 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19654
    role 19598
      biological role 19596
        biochemical role 19125
          metabolite 19093
            eukaryotic metabolite 18735
              fungal metabolite 17350
                Saccharomyces cerevisiae metabolite 16364
                  2'-deoxycytidine 3
                    5-methyl-2'-deoxycytidine 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19654
    subatomic particle 19650
      composite particle 19650
        hadron 19650
          baryon 19650
            nucleon 19650
              atomic nucleus 19650
                atom 19650
                  main group element atom 19531
                    p-block element atom 19531
                      carbon group element atom 19413
                        carbon atom 19405
                          organic molecular entity 19405
                            heteroorganic entity 18990
                              organochalcogen compound 18705
                                organooxygen compound 18615
                                  carbohydrates and carbohydrate derivatives 11721
                                    carbohydrate 11721
                                      carbohydrate derivative 11336
                                        glycosyl compound 10287
                                          N-glycosyl compound 4203
                                            nucleoside 4027
                                              deoxyribonucleoside 981
                                                2'-deoxyribonucleoside 310
                                                  pyrimidine 2'-deoxyribonucleoside 295
                                                    2'-deoxycytidine 3
                                                      5-methyl-2'-deoxycytidine 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.