Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   


go back to main search page
Accession:CHEBI:15435 term browser browse the term
Definition:A porphyrinogen that has formula C34H40N4O4.
Synonyms:related_synonym: 7,12-diethenyl-3,8,13,17-tetramethyl-5,10,15,20,22,24-hexahydroporphyrin-2,18-dipropanoic acid;   Formula=C34H40N4O4;   InChI=1S/C34H40N4O4/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25/h7-8,35-38H,1-2,9-16H2,3-6H3,(H,39,40)(H,41,42);   InChIKey=UHSGPDMIQQYNAX-UHFFFAOYSA-N;   Protoporphyrinogen IX;   SMILES=Cc1c2Cc3[nH]c(Cc4[nH]c(Cc5[nH]c(Cc([nH]2)c1CCC(O)=O)c(CCC(O)=O)c5C)c(C=C)c4C)c(C=C)c3C
 alt_id: CHEBI:14962;   CHEBI:26359;   CHEBI:26360;   CHEBI:8593
 xref: Beilstein:1201533 "Beilstein";   CAS:7412-77-3 "ChemIDplus";   CAS:7412-77-3 "KEGG COMPOUND";   KEGG:C01079;   KNApSAcK:C00007371
 xref_mesh: MESH:C011539
 cyclic_relationship: is_conjugate_acid_of CHEBI:57307

show annotations for term's descendants       view all columns           Sort by:
protoporphyrinogen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CPOX coproporphyrinogen oxidase JBrowse link 3 98,569,837 98,593,684 RGD:6480464
G TGFB1 transforming growth factor beta 1 JBrowse link 19 41,330,323 41,353,922 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 23806
    role 23693
      biological role 23656
        biochemical role 23002
          cofactor 16539
            porphyrins 345
              porphyrinogens 2
                protoporphyrinogen 2
Path 2
Term Annotations click to browse term
  CHEBI ontology 23806
    subatomic particle 23757
      composite particle 23757
        hadron 23757
          baryon 23757
            nucleon 23757
              atomic nucleus 23757
                atom 23757
                  main group element atom 23576
                    p-block element atom 23576
                      carbon group element atom 23289
                        carbon atom 23243
                          organic molecular entity 23243
                            organic molecule 23107
                              organic cyclic compound 22098
                                organic heterocyclic compound 20742
                                  organonitrogen heterocyclic compound 18614
                                    polypyrrole 621
                                      tetrapyrrole 501
                                        cyclic tetrapyrrole 364
                                          porphyrins 345
                                            porphyrinogens 2
                                              protoporphyrinogen 2
paths to the root


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.