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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:all-trans-retinoic acid
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Accession:CHEBI:15367 term browser browse the term
Definition:A retinoic acid in which all four exocyclic double bonds have E- (trans-) geometry.
Synonyms:exact_synonym: (2E,4E,6E,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-en-1-yl)nona-2,4,6,8-tetraenoic acid
 related_synonym: (2E,4E,6E,8E)-3,7-dimethyl-9-(2,6,6-trimethyl-1-cyclohexenyl)nona-2,4,6,8-tetraenoic acid;   (all-E)-3,7-Dimethyl-9-(2,6,6-trimethyl-1-cyclohexen-1-yl)-2,4,6,8-nonatetraenoic acid;   3,7-dimethyl-9-(2,6,6-trimethyl-1-cyclohexene-1-yl)-2,4,6,8-nonatetraenoic acid;   3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-enyl)nona-2,4,6,8-all-trans-tetraenoic acid;   3,7-dimethyl-9-(2,6,6-trimethylcyclohexen-1-yl)nona-2E,4E,6E,8E-tetraenoic acid;   AGN 100335;   Acide retinoique (French);   Altreno;   Atralin;   Avita;   Betarretin;   Biacna;   Cordes vas;   Dermairol;   Formula=C20H28O2;   InChI=1S/C20H28O2/c1-15(8-6-9-16(2)14-19(21)22)11-12-18-17(3)10-7-13-20(18,4)5/h6,8-9,11-12,14H,7,10,13H2,1-5H3,(H,21,22)/b9-6+,12-11+,15-8+,16-14+;   InChIKey=SHGAZHPCJJPHSC-YCNIQYBTSA-N;   RETINOIC ACID;   Refissa;   Renova;   Retin-A;   Retisol-A;   Ro 1-5488;   SMILES=CC(\\C=C\\C1=C(C)CCCC1(C)C)=C/C=C/C(C)=C/C(O)=O;   Stieva-A;   Tretin M;   Tri-luma;   Veltin;   Vesanoid;   Vitamin A acid;   all-(E)-Retinoic acid;   all-trans-Tretinoin;   all-trans-Vitamin A acid;   all-trans-Vitamin A1 acid;   all-trans-beta-Retinoic acid;   beta-Retinoic acid;   trans-Retinoic acid;   tretinoin;   tretinoina;   tretinoine;   tretinoinum
 alt_id: CHEBI:45376;   CHEBI:8815
 xref: CAS:302-79-4;   DrugBank:DB00755;   Drug_Central:2722;   FooDB:FDB022710;   HMDB:HMDB0001852;   KEGG:C00777;   KEGG:D00094;   LIPID_MAPS_instance:LMPR01090019
 xref_mesh: MESH:D014212
 xref: PDBeChem:REA;   PMID:10022884;   PMID:10970886;   PMID:11073974;   PMID:11214352;   PMID:11332619;   PMID:11343416;   PMID:11437362;   PMID:11556813;   PMID:11722649;   PMID:11896294;   PMID:11904404;   PMID:12958591;   PMID:14581379;   PMID:14605492;   PMID:14627725;   PMID:14704332;   PMID:14705145;   PMID:14978018;   PMID:15194426;   PMID:15318809;   PMID:15327395;   PMID:15359008;   PMID:15376324;   PMID:15476854;   PMID:15537748;   PMID:15539337;   PMID:15675886;   PMID:15839997;   PMID:16569247;   PMID:16685080;   PMID:16688769;   PMID:16720557;   PMID:16819260;   PMID:16847436;   PMID:16920920;   PMID:17073551;   PMID:17166212;   PMID:17204142;   PMID:17447762;   PMID:18052213;   PMID:18085670;   PMID:18162363;   PMID:18183617;   PMID:18318655;   PMID:18322276;   PMID:18400206;   PMID:18404486;   PMID:18440196;   PMID:18678272;   PMID:18800767;   PMID:18819820;   PMID:18977311;   PMID:19018099;   PMID:19112091;   PMID:19144697;   PMID:19427305;   PMID:19587328;   PMID:19597529;   PMID:19814868;   PMID:19841174;   PMID:21898109;   PMID:21924320;   PMID:21993673;   PMID:22134377;   PMID:22177959;   PMID:22180426;   PMID:22244299;   PMID:22261335;   PMID:22428994;   PMID:22514600;   PMID:22532966;   PMID:22534100;   PMID:22538278;   PMID:22741806;   PMID:27759097;   PMID:29492455;   PMID:33662750;   PMID:33820492;   PMID:34050114;   PMID:34050360;   PMID:34091189;   PMID:7501014;   PMID:7704533;   PMID:7961949;   Reaxys:2057223;   Wikipedia:Retinoic_acid;   Wikipedia:Tretinoin
 cyclic_relationship: is_conjugate_acid_of CHEBI:35291



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    Path 1
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      CHEBI ontology 20862
        role 20820
          chemical role 20396
            antioxidant 16464
              all-trans-retinoic acid 9951
                1-O-all-trans-retinoyl-beta-glucuronic acid 0
                4-hydroxyphenyl retinamide 3998
                5,6-epoxyretinoic acid + 0
                SR11302 0
                all-trans-13,14-dihydroretinoic acid + 0
                all-trans-16-hydroxyretinoic acid 0
                all-trans-18-hydroxyretinoic acid 0
                all-trans-3,4-didehydroretinoic acid 0
                all-trans-4,16-dihydroxyretinoic acid 0
                all-trans-4,18-dihydroxyretinoic acid 0
                all-trans-4-hydroxyretinoic acid + 9
                all-trans-4-oxo-16-hydroxyretinoic acid 0
                all-trans-4-oxo-18-hydroxyretinoic acid 0
                all-trans-4-oxoretinoic acid + 108
    Path 2
    Term Annotations click to browse term
      CHEBI ontology 20862
        subatomic particle 20860
          composite particle 20860
            hadron 20860
              baryon 20860
                nucleon 20860
                  atomic nucleus 20860
                    atom 20860
                      main group element atom 20781
                        main group molecular entity 20781
                          s-block molecular entity 20574
                            hydrogen molecular entity 20558
                              hydrides 19693
                                organic hydride 19079
                                  organic fundamental parent 19079
                                    hydrocarbon 18731
                                      terpene 14163
                                        terpenoid 13875
                                          diterpenoid 13091
                                            retinoid 10309
                                              vitamin A 9987
                                                all-trans-retinoic acid 9951
                                                  1-O-all-trans-retinoyl-beta-glucuronic acid 0
                                                  4-hydroxyphenyl retinamide 3998
                                                  5,6-epoxyretinoic acid + 0
                                                  SR11302 0
                                                  all-trans-13,14-dihydroretinoic acid + 0
                                                  all-trans-16-hydroxyretinoic acid 0
                                                  all-trans-18-hydroxyretinoic acid 0
                                                  all-trans-3,4-didehydroretinoic acid 0
                                                  all-trans-4,16-dihydroxyretinoic acid 0
                                                  all-trans-4,18-dihydroxyretinoic acid 0
                                                  all-trans-4-hydroxyretinoic acid + 9
                                                  all-trans-4-oxo-16-hydroxyretinoic acid 0
                                                  all-trans-4-oxo-18-hydroxyretinoic acid 0
                                                  all-trans-4-oxoretinoic acid + 108
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