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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:all-trans-retinoic acid
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Accession:CHEBI:15367 term browser browse the term
Definition:A retinoic acid in which all four exocyclic double bonds have E- (trans-) geometry.
Synonyms:exact_synonym: (2E,4E,6E,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-en-1-yl)nona-2,4,6,8-tetraenoic acid
 related_synonym: (2E,4E,6E,8E)-3,7-dimethyl-9-(2,6,6-trimethyl-1-cyclohexenyl)nona-2,4,6,8-tetraenoic acid;   (all-E)-3,7-Dimethyl-9-(2,6,6-trimethyl-1-cyclohexen-1-yl)-2,4,6,8-nonatetraenoic acid;   3,7-dimethyl-9-(2,6,6-trimethyl-1-cyclohexene-1-yl)-2,4,6,8-nonatetraenoic acid;   3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-enyl)nona-2,4,6,8-all-trans-tetraenoic acid;   3,7-dimethyl-9-(2,6,6-trimethylcyclohexen-1-yl)nona-2E,4E,6E,8E-tetraenoic acid;   AGN 100335;   Acide retinoique (French);   Altreno;   Atralin;   Avita;   Betarretin;   Biacna;   Cordes vas;   Dermairol;   Formula=C20H28O2;   InChI=1S/C20H28O2/c1-15(8-6-9-16(2)14-19(21)22)11-12-18-17(3)10-7-13-20(18,4)5/h6,8-9,11-12,14H,7,10,13H2,1-5H3,(H,21,22)/b9-6+,12-11+,15-8+,16-14+;   InChIKey=SHGAZHPCJJPHSC-YCNIQYBTSA-N;   RETINOIC ACID;   Refissa;   Renova;   Retin-A;   Retisol-A;   Ro 1-5488;   SMILES=CC(\\C=C\\C1=C(C)CCCC1(C)C)=C/C=C/C(C)=C/C(O)=O;   Stieva-A;   Tretin M;   Tri-luma;   Veltin;   Vesanoid;   Vitamin A acid;   all-(E)-Retinoic acid;   all-trans-Tretinoin;   all-trans-Vitamin A acid;   all-trans-Vitamin A1 acid;   all-trans-beta-Retinoic acid;   beta-Retinoic acid;   trans-Retinoic acid;   tretinoin;   tretinoina;   tretinoine;   tretinoinum
 alt_id: CHEBI:45376;   CHEBI:8815
 xref: Beilstein:2057223;   CAS:302-79-4;   DrugBank:DB00755;   Drug_Central:2722;   FooDB:FDB022710;   HMDB:HMDB0001852;   KEGG:C00777;   KEGG:D00094;   LIPID_MAPS_instance:LMPR01090019
 xref_mesh: MESH:D014212
 xref: PDBeChem:REA;   PMID:10022884;   PMID:10970886;   PMID:11073974;   PMID:11214352;   PMID:11332619;   PMID:11343416;   PMID:11437362;   PMID:11556813;   PMID:11722649;   PMID:11896294;   PMID:11904404;   PMID:12958591;   PMID:14581379;   PMID:14605492;   PMID:14627725;   PMID:14704332;   PMID:14705145;   PMID:14978018;   PMID:15194426;   PMID:15318809;   PMID:15327395;   PMID:15359008;   PMID:15376324;   PMID:15476854;   PMID:15537748;   PMID:15539337;   PMID:15675886;   PMID:15839997;   PMID:16569247;   PMID:16685080;   PMID:16688769;   PMID:16720557;   PMID:16819260;   PMID:16847436;   PMID:16920920;   PMID:17073551;   PMID:17166212;   PMID:17204142;   PMID:17447762;   PMID:18052213;   PMID:18085670;   PMID:18162363;   PMID:18183617;   PMID:18318655;   PMID:18322276;   PMID:18400206;   PMID:18404486;   PMID:18440196;   PMID:18678272;   PMID:18800767;   PMID:18819820;   PMID:18977311;   PMID:19018099;   PMID:19112091;   PMID:19144697;   PMID:19427305;   PMID:19587328;   PMID:19597529;   PMID:19814868;   PMID:19841174;   PMID:21898109;   PMID:21924320;   PMID:21993673;   PMID:22134377;   PMID:22177959;   PMID:22180426;   PMID:22244299;   PMID:22261335;   PMID:22428994;   PMID:22514600;   PMID:22532966;   PMID:22534100;   PMID:22538278;   PMID:22741806;   PMID:27759097;   PMID:29492455;   PMID:33662750;   PMID:33820492;   PMID:34050114;   PMID:34050360;   PMID:34091189;   PMID:7501014;   PMID:7704533;   PMID:7961949;   Reaxys:2057223;   Wikipedia:Retinoic_acid;   Wikipedia:Tretinoin
 cyclic_relationship: is_conjugate_acid_of CHEBI:35291


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    Path 1
    Term Annotations click to browse term
      CHEBI ontology 19876
        role 19851
          chemical role 19472
            antioxidant 16032
              all-trans-retinoic acid 9520
                1-O-all-trans-retinoyl-beta-glucuronic acid 0
                4-hydroxyphenyl retinamide 3985
                5,6-epoxyretinoic acid + 0
                SR11302 0
                all-trans-13,14-dihydroretinoic acid + 0
                all-trans-16-hydroxyretinoic acid 0
                all-trans-18-hydroxyretinoic acid 0
                all-trans-3,4-didehydroretinoic acid 0
                all-trans-4,16-dihydroxyretinoic acid 0
                all-trans-4,18-dihydroxyretinoic acid 0
                all-trans-4-hydroxyretinoic acid + 9
                all-trans-4-oxo-16-hydroxyretinoic acid 0
                all-trans-4-oxo-18-hydroxyretinoic acid 0
                all-trans-4-oxoretinoic acid + 108
    Path 2
    Term Annotations click to browse term
      CHEBI ontology 19876
        subatomic particle 19874
          composite particle 19874
            hadron 19874
              baryon 19874
                nucleon 19874
                  atomic nucleus 19905
                    atom 19905
                      main group element atom 19821
                        p-block element atom 19821
                          carbon group element atom 19768
                            carbon atom 19764
                              organic molecular entity 19764
                                organic group 18962
                                  organic divalent group 18943
                                    organodiyl group 18915
                                      carbonyl group 18869
                                        carbonyl compound 18869
                                          carboxylic acid 18618
                                            monocarboxylic acid 17917
                                              alpha,beta-unsaturated monocarboxylic acid 13224
                                                retinoic acid 9727
                                                  all-trans-retinoic acid 9520
                                                    1-O-all-trans-retinoyl-beta-glucuronic acid 0
                                                    4-hydroxyphenyl retinamide 3985
                                                    5,6-epoxyretinoic acid + 0
                                                    SR11302 0
                                                    all-trans-13,14-dihydroretinoic acid + 0
                                                    all-trans-16-hydroxyretinoic acid 0
                                                    all-trans-18-hydroxyretinoic acid 0
                                                    all-trans-3,4-didehydroretinoic acid 0
                                                    all-trans-4,16-dihydroxyretinoic acid 0
                                                    all-trans-4,18-dihydroxyretinoic acid 0
                                                    all-trans-4-hydroxyretinoic acid + 9
                                                    all-trans-4-oxo-16-hydroxyretinoic acid 0
                                                    all-trans-4-oxo-18-hydroxyretinoic acid 0
                                                    all-trans-4-oxoretinoic acid + 108
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