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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:all-trans-retinoic acid
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Accession:CHEBI:15367 term browser browse the term
Definition:A retinoic acid in which all four exocyclic double bonds have E- (trans-) geometry.
Synonyms:exact_synonym: (2E,4E,6E,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-en-1-yl)nona-2,4,6,8-tetraenoic acid
 related_synonym: (all-E)-3,7-Dimethyl-9-(2,6,6-trimethyl-1-cyclohexen-1-yl)-2,4,6,8-nonatetraenoic acid;   3,7-Dimethyl-9-(2,6,6-trimethyl-1-cyclohexene-1-yl)-2,4,6,8-nonatetraenoic acid (ECL);   AGN 100335;   Acide retinoique (French) (DSL);   Formula=C20H28O2;   InChI=1S/C20H28O2/c1-15(8-6-9-16(2)14-19(21)22)11-12-18-17(3)10-7-13-20(18,4)5/h6,8-9,11-12,14H,7,10,13H2,1-5H3,(H,21,22)/b9-6+,12-11+,15-8+,16-14+;   InChIKey=SHGAZHPCJJPHSC-YCNIQYBTSA-N;   RETINOIC ACID;   Renova;   Retin-A;   Retisol-A;   Ro 1-5488;   SMILES=CC(\\C=C\\C1=C(C)CCCC1(C)C)=C/C=C/C(C)=C/C(O)=O;   Stieva-A;   Tretin M;   Tretinoine (French) (EINECS);   Vesanoid;   Vitamin A acid;   all-(E)-Retinoic acid;   all-trans-Tretinoin;   all-trans-Vitamin A acid;   all-trans-Vitamin A1 acid;   all-trans-beta-Retinoic acid;   beta-Retinoic acid;   trans-Retinoic acid;   tretinoin
 alt_id: CHEBI:45376;   CHEBI:8815
 xref: Beilstein:2057223;   CAS:302-79-4;   DrugBank:DB00755;   Drug_Central:2722;   HMDB:HMDB0001852;   KEGG:C00777;   KEGG:D00094;   LIPID_MAPS_instance:LMPR01090019
 xref_mesh: MESH:D014212
 xref: PDBeChem:REA;   PMID:11073974;   PMID:11214352;   PMID:11332619;   PMID:11343416;   PMID:11437362;   PMID:11556813;   PMID:11722649;   PMID:11896294;   PMID:11904404;   PMID:14581379;   PMID:14605492;   PMID:14627725;   PMID:14704332;   PMID:14705145;   PMID:14978018;   PMID:15194426;   PMID:15318809;   PMID:15327395;   PMID:15359008;   PMID:15376324;   PMID:15476854;   PMID:15537748;   PMID:15539337;   PMID:15675886;   PMID:15839997;   PMID:16569247;   PMID:16685080;   PMID:16688769;   PMID:16720557;   PMID:16819260;   PMID:16847436;   PMID:16920920;   PMID:17073551;   PMID:17166212;   PMID:17204142;   PMID:18052213;   PMID:18085670;   PMID:18162363;   PMID:18183617;   PMID:18318655;   PMID:18322276;   PMID:18400206;   PMID:18404486;   PMID:18440196;   PMID:18678272;   PMID:18819820;   PMID:18977311;   PMID:19112091;   PMID:19144697;   PMID:19427305;   PMID:19587328;   PMID:19597529;   PMID:19814868;   PMID:19841174;   PMID:21898109;   PMID:21924320;   PMID:21993673;   PMID:22134377;   PMID:22177959;   PMID:22180426;   PMID:22244299;   PMID:22261335;   PMID:22428994;   PMID:22514600;   PMID:22532966;   PMID:22534100;   PMID:22538278;   PMID:22741806;   Reaxys:2057223;   Wikipedia:Tretinoin
 cyclic_relationship: is_conjugate_acid_of CHEBI:35291


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    Path 1
    Term Annotations click to browse term
      CHEBI ontology 19771
        role 19716
          chemical role 19256
            antioxidant 14273
              all-trans-retinoic acid 7424
                1-O-all-trans-retinoyl-beta-glucuronic acid 0
                4-hydroxyphenyl retinamide 3996
                5,6-epoxyretinoic acid + 0
                all-trans-16-hydroxyretinoic acid 0
                all-trans-18-hydroxyretinoic acid 0
                all-trans-3,4-didehydroretinoic acid 0
                all-trans-4,16-dihydroxyretinoic acid 0
                all-trans-4,18-dihydroxyretinoic acid 0
                all-trans-4-hydroxyretinoic acid + 9
                all-trans-4-oxo-16-hydroxyretinoic acid 0
                all-trans-4-oxo-18-hydroxyretinoic acid 0
                all-trans-4-oxoretinoic acid + 109
                vitamin A + 0
    Path 2
    Term Annotations click to browse term
      CHEBI ontology 19771
        subatomic particle 19770
          composite particle 19770
            hadron 19770
              baryon 19770
                nucleon 19770
                  atomic nucleus 19770
                    atom 19770
                      main group element atom 19658
                        p-block element atom 19658
                          carbon group element atom 19574
                            carbon atom 19564
                              organic molecular entity 19564
                                organic group 18599
                                  organic divalent group 18590
                                    organodiyl group 18590
                                      carbonyl group 18505
                                        carbonyl compound 18505
                                          carboxylic acid 18157
                                            monocarboxylic acid 17530
                                              alpha,beta-unsaturated monocarboxylic acid 12221
                                                retinoic acid 7684
                                                  all-trans-retinoic acid 7424
                                                    1-O-all-trans-retinoyl-beta-glucuronic acid 0
                                                    4-hydroxyphenyl retinamide 3996
                                                    5,6-epoxyretinoic acid + 0
                                                    all-trans-16-hydroxyretinoic acid 0
                                                    all-trans-18-hydroxyretinoic acid 0
                                                    all-trans-3,4-didehydroretinoic acid 0
                                                    all-trans-4,16-dihydroxyretinoic acid 0
                                                    all-trans-4,18-dihydroxyretinoic acid 0
                                                    all-trans-4-hydroxyretinoic acid + 9
                                                    all-trans-4-oxo-16-hydroxyretinoic acid 0
                                                    all-trans-4-oxo-18-hydroxyretinoic acid 0
                                                    all-trans-4-oxoretinoic acid + 109
                                                    vitamin A + 0
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