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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:sophoroside
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Accession:CHEBI:145470 term browser browse the term
Definition:Any glycoside of sophorose (2-O-beta-D-glucopyranosyl-D-glucopyranose).
Synonyms:related_synonym: Formula=C12H21O11R;   SMILES=O(C1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O)O)O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)*;   sophorosides


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kaempferol 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgb1 high mobility group box 1 multiple interactions
decreases response to substance
ISO kaempferol 3-O-sophoroside inhibits the reaction [HMGB1 protein results in increased expression of ICAM1 protein]; kaempferol 3-O-sophoroside inhibits the reaction [HMGB1 protein results in increased expression of SELE protein]; kaempferol 3-O-sophoroside inhibits the reaction [HMGB1 protein results in increased expression of TLR2 protein]; kaempferol 3-O-sophoroside inhibits the reaction [HMGB1 protein results in increased expression of TLR4 protein]; kaempferol 3-O-sophoroside inhibits the reaction [HMGB1 protein results in increased expression of VCAM1 protein]; kaempferol 3-O-sophoroside inhibits the reaction [Lipopolysaccharides results in increased secretion of HMGB1 protein]
kaempferol 3-O-sophoroside results in decreased susceptibility to HMGB1 protein
CTD PMID:22178603 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Icam1 intercellular adhesion molecule 1 multiple interactions ISO kaempferol 3-O-sophoroside inhibits the reaction [HMGB1 protein results in increased expression of ICAM1 protein] CTD PMID:22178603 NCBI chr 8:22,035,287...22,047,049
Ensembl chr 8:22,035,256...22,047,059
JBrowse link
G Sele selectin E multiple interactions ISO kaempferol 3-O-sophoroside inhibits the reaction [HMGB1 protein results in increased expression of SELE protein] CTD PMID:22178603 NCBI chr13:82,355,234...82,365,323
Ensembl chr13:82,355,471...82,365,341
JBrowse link
G Tlr2 toll-like receptor 2 multiple interactions ISO kaempferol 3-O-sophoroside inhibits the reaction [HMGB1 protein results in increased expression of TLR2 protein] CTD PMID:22178603 NCBI chr 2:182,840,171...182,846,061
Ensembl chr 2:182,840,727...182,846,061
JBrowse link
G Tlr4 toll-like receptor 4 multiple interactions ISO kaempferol 3-O-sophoroside inhibits the reaction [HMGB1 protein results in increased expression of TLR4 protein] CTD PMID:22178603 NCBI chr 5:82,587,424...82,601,056
Ensembl chr 5:82,587,420...82,601,052
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 multiple interactions ISO kaempferol 3-O-sophoroside inhibits the reaction [HMGB1 protein results in increased expression of VCAM1 protein] CTD PMID:22178603 NCBI chr 2:219,071,193...219,090,931
Ensembl chr 2:219,071,193...219,097,619
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19772
    role 19717
      biological role 19716
        biochemical role 19225
          metabolite 19202
            eukaryotic metabolite 18823
              plant metabolite 17359
                sophorose 6
                  sophoroside 6
                    (9Z)-17-hydroxyoctadec-9-enoic acid 17-O-sophoroside 0
                    13-sophorosyloxydocosanoic acid 0
                    4-nitrophenyl beta-sophoroside 0
                    Bougainvillein-r-I 0
                    anthocyanidin 3-O-sophoroside + 0
                    attenoside 0
                    kaempferol 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside 6
                    lyciumoside II 0
                    methyl 13-sophorosyloxydocosanoate 0
                    myricetin 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside 0
                    quercetin 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside + 0
                    rebaudioside D + 0
                    rebaudioside E + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19772
    subatomic particle 19767
      composite particle 19767
        hadron 19767
          baryon 19767
            nucleon 19767
              atomic nucleus 19767
                atom 19767
                  main group element atom 19654
                    p-block element atom 19654
                      carbon group element atom 19550
                        carbon atom 19539
                          organic molecular entity 19539
                            heteroorganic entity 19147
                              organochalcogen compound 18855
                                organooxygen compound 18777
                                  carbohydrates and carbohydrate derivatives 12173
                                    carbohydrate 12173
                                      oligosaccharide 511
                                        disaccharide 420
                                          glycosylglucose 175
                                            sophorose 6
                                              sophoroside 6
                                                (9Z)-17-hydroxyoctadec-9-enoic acid 17-O-sophoroside 0
                                                13-sophorosyloxydocosanoic acid 0
                                                4-nitrophenyl beta-sophoroside 0
                                                Bougainvillein-r-I 0
                                                anthocyanidin 3-O-sophoroside + 0
                                                attenoside 0
                                                kaempferol 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside 6
                                                lyciumoside II 0
                                                methyl 13-sophorosyloxydocosanoate 0
                                                myricetin 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside 0
                                                quercetin 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside + 0
                                                rebaudioside D + 0
                                                rebaudioside E + 0
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