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ONTOLOGY REPORT - ANNOTATIONS


Term:N-palmitoyl-sphingoid base
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Accession:CHEBI:144703 term browser browse the term
Definition:A ceramide where the N-acyl is a palmitoyl chain but the sphingoid base is not defined
Synonyms:related_synonym: Formula=C19H38NO3R;   SMILES=OC[C@@H]([C@@H](*)O)NC(=O)CCCCCCCCCCCCCCC;   an N-hexadecanoyl-sphingoid base;   palmitoylceramide


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N-hexadecanoylsphingosine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Asah2 N-acylsphingosine amidohydrolase 2 JBrowse link 1 250,557,042 250,665,083 RGD:6480464
G Atf4 activating transcription factor 4 JBrowse link 7 121,480,723 121,482,781 RGD:6480464
G Atf6 activating transcription factor 6 JBrowse link 13 89,053,457 89,242,531 RGD:6480464
G Cs citrate synthase JBrowse link 7 2,752,680 2,778,963 RGD:6480464
G Ddit3 DNA-damage inducible transcript 3 JBrowse link 7 70,578,564 70,585,074 RGD:6480464
G Hspa5 heat shock protein family A (Hsp70) member 5 JBrowse link 3 13,838,304 13,842,763 RGD:6480464
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:6480464
G Itpr1 inositol 1,4,5-trisphosphate receptor, type 1 JBrowse link 4 140,247,297 140,580,749 RGD:6480464
G Itpr2 inositol 1,4,5-trisphosphate receptor, type 2 JBrowse link 4 180,423,452 180,800,088 RGD:6480464
G Lipc lipase C, hepatic type JBrowse link 8 77,272,582 77,398,485 RGD:6480464
G Lipg lipase G, endothelial type JBrowse link 18 70,903,528 70,924,434 RGD:6480464
G Mfn2 mitofusin 2 JBrowse link 5 164,684,244 164,715,414 RGD:6480464
G Pacs2 phosphofurin acidic cluster sorting protein 2 JBrowse link 6 137,824,136 137,889,144 RGD:6480464
G Pc pyruvate carboxylase JBrowse link 1 219,759,157 219,859,854 RGD:6480464
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:6480464
G Vdac1 voltage-dependent anion channel 1 JBrowse link 10 37,724,915 37,752,827 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19669
    chemical entity 19667
      atom 19665
        nonmetal atom 19531
          carbon atom 19420
            organic molecular entity 19420
              N-palmitoyl-sphingoid base 16
                N-hexadecanoylphytosphingosine + 0
                N-hexadecanoylsphinganine + 0
                N-hexadecanoylsphingosine 16
                N-palmitoylhexadecasphinganine 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19669
    subatomic particle 19665
      composite particle 19665
        hadron 19665
          baryon 19665
            nucleon 19665
              atomic nucleus 19665
                atom 19665
                  main group element atom 19545
                    p-block element atom 19545
                      carbon group element atom 19428
                        carbon atom 19420
                          organic molecular entity 19420
                            organic group 18343
                              organic divalent group 18334
                                organodiyl group 18334
                                  carbonyl group 18222
                                    carbonyl compound 18222
                                      carboxylic acid 17923
                                        carboacyl group 16943
                                          univalent carboacyl group 16943
                                            carbamoyl group 16622
                                              carboxamide 16622
                                                ceramide 95
                                                  N-acylsphingoid 80
                                                    N-palmitoyl-sphingoid base 16
                                                      N-hexadecanoylphytosphingosine + 0
                                                      N-hexadecanoylsphinganine + 0
                                                      N-hexadecanoylsphingosine 16
                                                      N-palmitoylhexadecasphinganine 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.