Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:->4)-alpha-D-GalNAc-(1->6)-alpha-D-GlcN-(1->4)-alpha-D-(1->3)-[alpha-D-GalN-(1->4)-alpha-D-GalA-(1->7)-alpha-LD-Hep-(1->7)]-[beta-D-Glc-(1->2)]-alpha-LD-Hep-(1->3)-[beta-D-Gal-(1->4)]-alpha-LD-Hep-(1->5)-alpha-Kdo
go back to main search page
Accession:CHEBI:139342 term browser browse the term
Definition:A branched 11-residue branched carbohydrate group consisting of one alpha-D-GalN, one beta-D-Gal, one alpha-D-GalNac, one alpha-D-GlcN, one beta-D-Glc, one alpha-Kdo, two alpha-D-GalA and three alpha-LDHep residues, linked as shown.
Synonyms:exact_synonym: R->4)-2-acetamido-2-deoxy-alpha-D-galactopyranosyl-(1->6)-2-amino-2-deoxy-alpha-D-glucopyranosyl-(1->4)-alpha-D-galactopyranuronosyl-(1->3)-[2-amino-2-deoxy-alpha-D-galactopyranosyl-(1->4)-alpha-D-galactopyranuronosyl-(1->7)-L-glycero-alpha-D-manno-heptopyranosyl-(1->7)]-[beta-D-glucopyranosyl-(1->2)]-L-glycero-alpha-D-manno-heptopyranosyl-(1->3)-4-O-[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]-L-glycero-alpha-D-manno-heptopyranosyl-(1->5)-3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid
 related_synonym: Formula=C73H120N3O61;   R->4)-N-acetyl-alpha-D-galactosaminyl-(1->6)-alpha-D-glucosaminyl-(1->4)-alpha-D-galacturonosyl-(1->3)-[alpha-D-galactosaminyl-(1->4)-alpha-D-galacturonosyl-(1->7)-L-glycero-alpha-D-manno-heptosyl-(1->7)]-[beta-D-glucosyl-(1->2)]-L-glycero-alpha-D-manno-heptosyl-(1->3)-[beta-D-galactosyl-(1->4)]-L-glycero-alpha-D-manno-heptosyl-(1->5)-3-deoxy-alpha-D-manno-oct-2-ulosonic acid;   R->4)-alpha-D-GalpNAc-(1->6)-alpha-D-GlcpN-(1->4)-alpha-D-(1->3)-[alpha-D-GalpN-(1->4)-alpha-D-GalpA-(1->7)-alpha-LD-Hepp-(1->7)]-[beta-D-Glcp-(1->2)]-alpha-LD-Hepp-(1->3)-[beta-D-Galp-(1->4)]-alpha-LD-Hepp-(1->5)-alpha-Kdo;   SMILES=O([C@H]1[C@@H]([C@](O[C@@H]([C@H]1O)O[C@@H]2[C@@H](C[C@@](O[C@@]2([C@H](O)CO)[H])(C(=O)O)O)O)([C@H](CO)O)[H])O[C@H]3[C@@H]([C@H]([C@H]([C@H](O3)CO)O)O)O)[C@H]4O[C@@]([C@H]([C@@H]([C@@H]4O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O)O[C@@H]6[C@@H]([C@H]([C@H]([C@H](O6)C(O)=O)O[C@@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO[C@@H]8[C@@H]([C@H]([C@H]([C@H](O8)CO)O)O)NC(=O)C)O)O)N)O)O)O)([C@H](CO[C@H]9O[C@@]([C@H]([C@@H]([C@@H]9O)O)O)([C@H](CO[C@@H]%10[C@@H]([C@H]([C@H]([C@H](O%10)C(O)=O)O[C@@H]%11[C@@H]([C@H]([C@H]([C@H](O%11)CO)O*)O)N)O)O)O)[H])O)[H]
 xref: PMID:29186063


show annotations for term's descendants           Sort by:
 

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19821
    chemical entity 19821
      group 19741
        organic group 18737
          ->4)-alpha-D-GalNAc-(1->6)-alpha-D-GlcN-(1->4)-alpha-D-(1->3)-[alpha-D-GalN-(1->4)-alpha-D-GalA-(1->7)-alpha-LD-Hep-(1->7)]-[beta-D-Glc-(1->2)]-alpha-LD-Hep-(1->3)-[beta-D-Gal-(1->4)]-alpha-LD-Hep-(1->5)-alpha-Kdo 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19821
    subatomic particle 19819
      composite particle 19819
        hadron 19819
          baryon 19819
            nucleon 19819
              atomic nucleus 19819
                atom 19819
                  main group element atom 19716
                    p-block element atom 19716
                      carbon group element atom 19640
                        carbon group molecular entity 19640
                          organic molecular entity 19630
                            organic group 18737
                              ->4)-alpha-D-GalNAc-(1->6)-alpha-D-GlcN-(1->4)-alpha-D-(1->3)-[alpha-D-GalN-(1->4)-alpha-D-GalA-(1->7)-alpha-LD-Hep-(1->7)]-[beta-D-Glc-(1->2)]-alpha-LD-Hep-(1->3)-[beta-D-Gal-(1->4)]-alpha-LD-Hep-(1->5)-alpha-Kdo 0
paths to the root