Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:->4)-alpha-D-GalNAc-(1->6)-alpha-D-GlcN-(1->4)-alpha-D-(1->3)-[alpha-D-GalN-(1->4)-alpha-D-GalA-(1->7)-alpha-LD-Hep-(1->7)]-[beta-D-Glc-(1->2)]-alpha-LD-Hep-(1->3)-[beta-D-Gal-(1->4)]-alpha-LD-Hep-(1->5)-alpha-Kdo
go back to main search page
Accession:CHEBI:139342 term browser browse the term
Definition:A branched 11-residue branched carbohydrate group consisting of one alpha-D-GalN, one beta-D-Gal, one alpha-D-GalNac, one alpha-D-GlcN, one beta-D-Glc, one alpha-Kdo, two alpha-D-GalA and three alpha-LDHep residues, linked as shown.
Synonyms:exact_synonym: R->4)-2-acetamido-2-deoxy-alpha-D-galactopyranosyl-(1->6)-2-amino-2-deoxy-alpha-D-glucopyranosyl-(1->4)-alpha-D-galactopyranuronosyl-(1->3)-[2-amino-2-deoxy-alpha-D-galactopyranosyl-(1->4)-alpha-D-galactopyranuronosyl-(1->7)-L-glycero-alpha-D-manno-heptopyranosyl-(1->7)]-[beta-D-glucopyranosyl-(1->2)]-L-glycero-alpha-D-manno-heptopyranosyl-(1->3)-4-O-[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]-L-glycero-alpha-D-manno-heptopyranosyl-(1->5)-3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid
 related_synonym: Formula=C73H120N3O61;   R->4)-N-acetyl-alpha-D-galactosaminyl-(1->6)-alpha-D-glucosaminyl-(1->4)-alpha-D-galacturonosyl-(1->3)-[alpha-D-galactosaminyl-(1->4)-alpha-D-galacturonosyl-(1->7)-L-glycero-alpha-D-manno-heptosyl-(1->7)]-[beta-D-glucosyl-(1->2)]-L-glycero-alpha-D-manno-heptosyl-(1->3)-[beta-D-galactosyl-(1->4)]-L-glycero-alpha-D-manno-heptosyl-(1->5)-3-deoxy-alpha-D-manno-oct-2-ulosonic acid;   R->4)-alpha-D-GalpNAc-(1->6)-alpha-D-GlcpN-(1->4)-alpha-D-(1->3)-[alpha-D-GalpN-(1->4)-alpha-D-GalpA-(1->7)-alpha-LD-Hepp-(1->7)]-[beta-D-Glcp-(1->2)]-alpha-LD-Hepp-(1->3)-[beta-D-Galp-(1->4)]-alpha-LD-Hepp-(1->5)-alpha-Kdo;   SMILES=O([C@H]1[C@@H]([C@](O[C@@H]([C@H]1O)O[C@@H]2[C@@H](C[C@@](O[C@@]2([C@H](O)CO)[H])(C(=O)O)O)O)([C@H](CO)O)[H])O[C@H]3[C@@H]([C@H]([C@H]([C@H](O3)CO)O)O)O)[C@H]4O[C@@]([C@H]([C@@H]([C@@H]4O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O)O[C@@H]6[C@@H]([C@H]([C@H]([C@H](O6)C(O)=O)O[C@@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO[C@@H]8[C@@H]([C@H]([C@H]([C@H](O8)CO)O)O)NC(=O)C)O)O)N)O)O)O)([C@H](CO[C@H]9O[C@@]([C@H]([C@@H]([C@@H]9O)O)O)([C@H](CO[C@@H]%10[C@@H]([C@H]([C@H]([C@H](O%10)C(O)=O)O[C@@H]%11[C@@H]([C@H]([C@H]([C@H](O%11)CO)O*)O)N)O)O)O)[H])O)[H]
 xref: PMID:29186063


show annotations for term's descendants           Sort by:
 

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 21797
    chemical entity 21795
      group 21676
        organic group 19991
          ->4)-alpha-D-GalNAc-(1->6)-alpha-D-GlcN-(1->4)-alpha-D-(1->3)-[alpha-D-GalN-(1->4)-alpha-D-GalA-(1->7)-alpha-LD-Hep-(1->7)]-[beta-D-Glc-(1->2)]-alpha-LD-Hep-(1->3)-[beta-D-Gal-(1->4)]-alpha-LD-Hep-(1->5)-alpha-Kdo 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 21797
    subatomic particle 21783
      composite particle 21783
        hadron 21783
          baryon 21783
            nucleon 21783
              atomic nucleus 21783
                atom 21783
                  main group element atom 21700
                    p-block element atom 21700
                      carbon group element atom 21516
                        carbon group molecular entity 21516
                          organic molecular entity 21416
                            organic group 19991
                              ->4)-alpha-D-GalNAc-(1->6)-alpha-D-GlcN-(1->4)-alpha-D-(1->3)-[alpha-D-GalN-(1->4)-alpha-D-GalA-(1->7)-alpha-LD-Hep-(1->7)]-[beta-D-Glc-(1->2)]-alpha-LD-Hep-(1->3)-[beta-D-Gal-(1->4)]-alpha-LD-Hep-(1->5)-alpha-Kdo 0
paths to the root