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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:2-bromocarboxylic acid
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Accession:CHEBI:134367 term browser browse the term
Definition:Any carboxylic acid in which the carbon bearing the carboxy group is substituted by a bromine.
Synonyms:related_synonym: 2-bromocarboxylic acids;   Formula=C2H2BrO2R;   SMILES=OC(C(Br)*)=O;   alpha-bromocarboxylic acid;   alpha-bromocarboxylic acids


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2-bromohexadecanoic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 decreases expression EXP 2-bromopalmitate results in decreased expression of APOA1 mRNA CTD PMID:7556148 NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta multiple interactions ISO 2-bromopalmitate promotes the reaction [Tretinoin results in increased expression of CEBPB mRNA] CTD PMID:30076181 NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473
JBrowse link
G Fas Fas cell surface death receptor decreases expression ISO 2-bromopalmitate results in decreased expression of FAS mRNA CTD PMID:16712844 NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase increases activity EXP 2-bromopalmitate results in increased activity of GAPDH protein CTD PMID:10650946 NCBI chr 4:157,962,312...157,967,158
Ensembl chr 4:157,962,343...157,966,235
JBrowse link
G Ifit3 interferon-induced protein with tetratricopeptide repeats 3 multiple interactions ISO 2-bromopalmitate promotes the reaction [Tretinoin results in increased expression of IFIT3 mRNA] CTD PMID:30076181 NCBI chr 1:232,114,166...232,119,311
Ensembl chr 1:232,114,166...232,119,307
JBrowse link
G Irf1 interferon regulatory factor 1 multiple interactions ISO 2-bromopalmitate promotes the reaction [Tretinoin results in increased expression of IRF1 mRNA] CTD PMID:30076181 NCBI chr10:37,917,155...37,924,166
Ensembl chr10:37,916,670...37,924,166
JBrowse link
G Lat2 linker for activation of T cells family, member 2 decreases expression ISO 2-bromopalmitate results in decreased expression of LAT2 protein CTD PMID:23001822 NCBI chr12:22,104,163...22,118,294
Ensembl chr12:22,104,219...22,118,288
JBrowse link
G Ldlr low density lipoprotein receptor increases expression ISO 2-bromopalmitate results in increased expression of LDLR mRNA CTD PMID:23150725 NCBI chr 8:20,270,020...20,292,981
Ensembl chr 8:20,270,041...20,294,580
JBrowse link
G Lrat lecithin retinol acyltransferase increases expression EXP 2-bromopalmitate results in increased expression of LRAT mRNA CTD PMID:12576510 NCBI chr 2:168,264,093...168,273,155
Ensembl chr 2:168,266,877...168,273,619
JBrowse link
G Ly6e lymphocyte antigen 6 family member E multiple interactions ISO 2-bromopalmitate promotes the reaction [Tretinoin results in increased expression of LY6E mRNA] CTD PMID:30076181 NCBI chr 7:106,935,530...106,939,689
Ensembl chr 7:106,935,761...106,939,689
JBrowse link
G Mpo myeloperoxidase multiple interactions ISO 2-bromopalmitate promotes the reaction [Tretinoin results in decreased expression of MPO mRNA] CTD PMID:30076181 NCBI chr10:72,594,458...72,608,862
Ensembl chr10:72,594,661...72,604,819
JBrowse link
G Ppard peroxisome proliferator-activated receptor delta increases activity
multiple interactions
ISO 2-bromopalmitate results in increased activity of PPARD protein
2-bromopalmitate results in increased activity of [RXRA protein binds to PPARD protein]
CTD PMID:15997096 PMID:21543282 PMID:23150725 NCBI chr20:6,298,785...6,363,970
Ensembl chr20:6,298,785...6,363,968
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma increases expression EXP 2-bromopalmitate results in increased expression of PPARG protein CTD PMID:10650946 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Rara retinoic acid receptor, alpha multiple interactions ISO 2-bromopalmitate binds to and results in increased expression of RARA protein; 2-bromopalmitate inhibits the reaction [Am 580 results in decreased expression of RARA protein]; 2-bromopalmitate inhibits the reaction [Tretinoin results in decreased expression of RARA protein]; [2-bromopalmitate results in increased susceptibility to Tretinoin] which results in increased expression of RARA protein CTD PMID:30076181 NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
JBrowse link
G Rarb retinoic acid receptor, beta multiple interactions ISO 2-bromopalmitate promotes the reaction [Tretinoin results in increased expression of RARB mRNA] CTD PMID:30076181 NCBI chr15:8,700,533...9,051,288
Ensembl chr15:8,406,492...9,051,288
JBrowse link
G Rbp1 retinol binding protein 1 increases expression EXP 2-bromopalmitate results in increased expression of RBP1 mRNA CTD PMID:12576510 NCBI chr 8:99,025,218...99,046,740
Ensembl chr 8:99,025,206...99,046,743
JBrowse link
G Rxra retinoid X receptor alpha multiple interactions ISO 2-bromopalmitate results in increased activity of [RXRA protein binds to PPARD protein] CTD PMID:15997096 NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712
JBrowse link
G Spi1 Spi-1 proto-oncogene multiple interactions ISO 2-bromopalmitate promotes the reaction [Tretinoin results in increased expression of SPI1 mRNA] CTD PMID:30076181 NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393
JBrowse link
G Tgm2 transglutaminase 2 multiple interactions ISO 2-bromopalmitate promotes the reaction [Tretinoin results in increased expression of TGM2 mRNA] CTD PMID:30076181 NCBI chr 3:146,772,684...146,801,924
Ensembl chr 3:146,772,687...146,801,981
JBrowse link
G Ucp2 uncoupling protein 2 increases expression EXP 2-bromopalmitate results in increased expression of UCP2 mRNA CTD PMID:11341955 NCBI chr 1:154,839,242...154,845,612
Ensembl chr 1:154,839,209...154,845,611
JBrowse link
bromochloroacetic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta increases expression ISO bromochloroacetic acid results in increased expression of ACTB protein CTD PMID:21296659 NCBI chr12:11,663,112...11,666,697
Ensembl chr12:11,663,109...11,672,877
JBrowse link
G Actg2 actin gamma 2, smooth muscle decreases expression EXP bromochloroacetic acid results in decreased expression of ACTG2 mRNA CTD PMID:16460773 NCBI chr 4:116,021,832...116,046,475
Ensembl chr 4:116,021,832...116,046,465
JBrowse link
G Actn1 actinin, alpha 1 decreases expression EXP bromochloroacetic acid results in decreased expression of ACTN1 mRNA CTD PMID:16460773 NCBI chr 6:98,998,553...99,093,334
Ensembl chr 6:98,998,556...99,093,251
JBrowse link
G Actn4 actinin alpha 4 decreases expression EXP bromochloroacetic acid results in decreased expression of ACTN4 mRNA CTD PMID:16460773 NCBI chr 1:84,182,783...84,251,867
Ensembl chr 1:84,182,788...84,251,847
JBrowse link
G Afp alpha-fetoprotein decreases expression ISO bromochloroacetic acid results in decreased expression of AFP protein CTD PMID:21296659 NCBI chr14:17,573,412...17,591,476
Ensembl chr14:17,573,412...17,591,480
JBrowse link
G Akt2 AKT serine/threonine kinase 2 increases expression EXP bromochloroacetic acid results in increased expression of AKT2 mRNA CTD PMID:16460773 NCBI chr 1:82,877,228...82,933,828
Ensembl chr 1:82,883,547...82,933,817
JBrowse link
G Arf4 ADP-ribosylation factor 4 decreases expression EXP bromochloroacetic acid results in decreased expression of ARF4 mRNA CTD PMID:16460773 NCBI chr16:1,896,692...1,913,267
Ensembl chr16:1,896,546...1,913,261
JBrowse link
G Bnip3l BCL2 interacting protein 3 like increases expression EXP bromochloroacetic acid results in increased expression of BNIP3L mRNA CTD PMID:16460773 NCBI chr15:41,174,594...41,197,730
Ensembl chr15:41,174,594...41,197,803
JBrowse link
G Ccn3 cellular communication network factor 3 decreases expression EXP bromochloroacetic acid results in decreased expression of CCN3 mRNA CTD PMID:16460773 NCBI chr 7:86,094,000...86,101,022
Ensembl chr 7:86,094,000...86,101,019
JBrowse link
G Cd34 CD34 molecule decreases expression ISO bromochloroacetic acid results in decreased expression of CD34 protein CTD PMID:21296659 NCBI chr13:106,480,074...106,499,462
Ensembl chr13:106,480,043...106,499,832
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A decreases expression EXP bromochloroacetic acid results in decreased expression of CDKN1A mRNA CTD PMID:16460773 NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585
JBrowse link
G Cdx2 caudal type homeo box 2 increases expression ISO bromochloroacetic acid results in increased expression of CDX2 protein CTD PMID:21296659 NCBI chr12:7,726,798...7,733,142
Ensembl chr12:7,726,798...7,733,142
JBrowse link
G Col1a1 collagen type I alpha 1 chain decreases expression ISO bromochloroacetic acid results in decreased expression of COL1A1 protein CTD PMID:21296659 NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624
JBrowse link
G Col1a2 collagen type I alpha 2 chain decreases expression EXP bromochloroacetic acid results in decreased expression of COL1A2 mRNA CTD PMID:16460773 NCBI chr 4:32,563,938...32,598,868
Ensembl chr 4:32,563,381...32,598,867
JBrowse link
G Col2a1 collagen type II alpha 1 chain decreases expression ISO bromochloroacetic acid results in decreased expression of COL2A1 protein CTD PMID:21296659 NCBI chr 7:129,098,489...129,127,620
Ensembl chr 7:129,098,786...129,127,546
JBrowse link
G Crabp2 cellular retinoic acid binding protein 2 increases expression ISO bromochloroacetic acid results in increased expression of CRABP2 protein CTD PMID:21296659 NCBI chr 2:173,417,004...173,421,352
Ensembl chr 2:173,416,857...173,421,379
JBrowse link
G Ddx4 DEAD-box helicase 4 decreases expression ISO bromochloroacetic acid results in decreased expression of DDX4 protein CTD PMID:21296659 NCBI chr 2:44,227,946...44,282,867
Ensembl chr 2:44,227,946...44,282,723
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta decreases expression ISO bromochloroacetic acid results in decreased expression of DNMT3B protein CTD PMID:21296659 NCBI chr 3:142,130,592...142,169,124
Ensembl chr 3:142,130,592...142,169,124
JBrowse link
G Eef1a1 eukaryotic translation elongation factor 1 alpha 1 increases expression ISO bromochloroacetic acid results in increased expression of EEF1A1 protein CTD PMID:21296659 NCBI chr 8:79,341,554...79,344,784
Ensembl chr 8:79,341,557...79,344,839
JBrowse link
G Eomes eomesodermin decreases expression ISO bromochloroacetic acid results in decreased expression of EOMES protein CTD PMID:21296659 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316
JBrowse link
G Eras ES cell expressed Ras increases expression ISO bromochloroacetic acid results in increased expression of ERAS protein CTD PMID:21296659 NCBI chr  X:14,573,987...14,578,455
Ensembl chr  X:14,573,987...14,578,374
JBrowse link
G Fas Fas cell surface death receptor decreases expression EXP bromochloroacetic acid results in decreased expression of FAS mRNA CTD PMID:16460773 NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
JBrowse link
G Fat1 FAT atypical cadherin 1 decreases expression EXP bromochloroacetic acid results in decreased expression of FAT1 mRNA CTD PMID:16460773 NCBI chr16:47,177,253...47,296,261
Ensembl chr16:47,177,248...47,296,107
JBrowse link
G Fgf4 fibroblast growth factor 4 increases expression ISO bromochloroacetic acid results in increased expression of FGF4 protein CTD PMID:21296659 NCBI chr 1:200,023,937...200,027,793
Ensembl chr 1:200,024,056...200,025,466
JBrowse link
G Fgf5 fibroblast growth factor 5 increases expression ISO bromochloroacetic acid results in increased expression of FGF5 protein CTD PMID:21296659 NCBI chr14:11,325,334...11,346,570
Ensembl chr14:11,325,334...11,345,997
JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 decreases expression ISO bromochloroacetic acid results in decreased expression of FLT1 protein CTD PMID:21296659 NCBI chr12:7,296,899...7,468,626
Ensembl chr12:7,297,292...7,468,626
JBrowse link
G Fn1 fibronectin 1 increases expression ISO bromochloroacetic acid results in increased expression of FN1 protein CTD PMID:21296659 NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit decreases expression EXP bromochloroacetic acid results in decreased expression of FOS mRNA CTD PMID:16460773 NCBI chr 6:105,121,170...105,124,036
Ensembl chr 6:105,121,170...105,124,036
JBrowse link
G Fosl1 FOS like 1, AP-1 transcription factor subunit decreases expression EXP bromochloroacetic acid results in decreased expression of FOSL1 mRNA CTD PMID:16460773 NCBI chr 1:202,754,549...202,763,057
Ensembl chr 1:202,754,529...202,764,930
JBrowse link
G Foxa2 forkhead box A2 affects expression ISO bromochloroacetic acid affects the expression of FOXA2 protein CTD PMID:21296659 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
JBrowse link
G Fzd2 frizzled class receptor 2 decreases expression EXP bromochloroacetic acid results in decreased expression of FZD2 mRNA CTD PMID:16460773 NCBI chr10:87,561,866...87,563,776
Ensembl chr10:87,561,326...87,565,334
JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta 3 affects expression ISO bromochloroacetic acid affects the expression of GABRB3 protein CTD PMID:21296659 NCBI chr 1:108,467,047...108,702,522
Ensembl chr 1:108,296,124...108,698,961
JBrowse link
G Gadd45a growth arrest and DNA-damage-inducible, alpha decreases expression EXP bromochloroacetic acid results in decreased expression of GADD45A mRNA CTD PMID:16460773 NCBI chr 4:96,154,789...96,157,091
Ensembl chr 4:96,154,789...96,157,115
JBrowse link
G Gal galanin and GMAP prepropeptide increases expression ISO bromochloroacetic acid results in increased expression of GAL protein CTD PMID:21296659 NCBI chr 1:200,650,439...200,655,302
Ensembl chr 1:200,650,439...200,654,959
JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase increases expression ISO bromochloroacetic acid results in increased expression of GAPDH protein CTD PMID:21296659 NCBI chr 4:157,962,312...157,967,158
Ensembl chr 4:157,962,343...157,966,235
JBrowse link
G Gata6 GATA binding protein 6 increases expression ISO bromochloroacetic acid results in increased expression of GATA6 protein CTD PMID:21296659 NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
JBrowse link
G Gbx2 gastrulation brain homeobox 2 increases expression ISO bromochloroacetic acid results in increased expression of GBX2 protein CTD PMID:21296659 NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212
JBrowse link
G Gcm1 glial cells missing transcription factor 1 increases expression ISO bromochloroacetic acid results in increased expression of GCM1 protein CTD PMID:21296659 NCBI chr 8:78,925,687...78,938,924
Ensembl chr 8:78,925,687...78,938,924
JBrowse link
G Gdf3 growth differentiation factor 3 increases expression ISO bromochloroacetic acid results in increased expression of GDF3 protein CTD PMID:21296659 NCBI chr 4:155,831,572...155,835,953
Ensembl chr 4:155,830,909...155,835,937
JBrowse link
G Gfap glial fibrillary acidic protein decreases expression ISO bromochloroacetic acid results in decreased expression of GFAP protein CTD PMID:21296659 NCBI chr10:87,852,891...87,861,631
Ensembl chr10:87,852,890...87,861,589
JBrowse link
G Gnaq G protein subunit alpha q decreases expression EXP bromochloroacetic acid results in decreased expression of GNAQ mRNA CTD PMID:16460773 NCBI chr 1:213,425,631...213,671,947
Ensembl chr 1:213,424,465...213,667,672
JBrowse link
G Grb7 growth factor receptor bound protein 7 increases expression ISO bromochloroacetic acid results in increased expression of GRB7 protein CTD PMID:21296659 NCBI chr10:83,443,387...83,453,057
Ensembl chr10:83,444,004...83,453,052
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta affects expression EXP bromochloroacetic acid affects the expression of GSK3B mRNA CTD PMID:16460773 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Hbz hemoglobin subunit zeta increases expression ISO bromochloroacetic acid results in increased expression of HBZ protein CTD PMID:21296659 NCBI chr10:15,343,821...15,345,301
Ensembl chr10:15,343,831...15,345,312
JBrowse link
G Iapp islet amyloid polypeptide decreases expression ISO bromochloroacetic acid results in decreased expression of IAPP protein CTD PMID:21296659 NCBI chr 4:175,237,013...175,244,373
Ensembl chr 4:175,237,115...175,242,920
JBrowse link
G Ifitm1 interferon induced transmembrane protein 1 increases expression ISO bromochloroacetic acid results in increased expression of IFITM1 protein CTD PMID:21296659 NCBI chr 1:196,067,163...196,069,169
Ensembl chr 1:196,067,963...196,069,169
JBrowse link
G Ifitm2 interferon induced transmembrane protein 2 decreases expression ISO bromochloroacetic acid results in decreased expression of IFITM2 protein CTD PMID:21296659 NCBI chr 1:196,051,539...196,052,719
Ensembl chr 1:196,051,537...196,052,741
JBrowse link
G Igf1 insulin-like growth factor 1 increases expression EXP bromochloroacetic acid results in increased expression of IGF1 mRNA CTD PMID:16460773 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
JBrowse link
G Igfbp2 insulin-like growth factor binding protein 2 increases expression EXP
ISO
bromochloroacetic acid results in increased expression of IGFBP2 mRNA
bromochloroacetic acid results in increased expression of IGFBP2 protein
CTD PMID:16460773 PMID:21296659 NCBI chr 9:74,415,574...74,442,945
Ensembl chr 9:74,415,546...74,442,937
JBrowse link
G Igfbp3 insulin-like growth factor binding protein 3 increases expression EXP bromochloroacetic acid results in increased expression of IGFBP3 mRNA CTD PMID:16460773 NCBI chr14:82,056,347...82,064,083
Ensembl chr14:82,056,347...82,064,083
JBrowse link
G Igfbp6 insulin-like growth factor binding protein 6 increases expression EXP bromochloroacetic acid results in increased expression of IGFBP6 mRNA CTD PMID:16460773 NCBI chr 7:133,276,309...133,280,944
Ensembl chr 7:133,276,234...133,280,966
JBrowse link
G Il6st interleukin 6 cytokine family signal transducer increases expression ISO bromochloroacetic acid results in increased expression of IL6ST protein CTD PMID:21296659 NCBI chr 2:44,065,979...44,106,255
Ensembl chr 2:44,066,130...44,109,936
JBrowse link
G Ilk integrin-linked kinase decreases expression EXP bromochloroacetic acid results in decreased expression of ILK mRNA CTD PMID:16460773 NCBI chr 1:160,088,839...160,095,140
Ensembl chr 1:160,088,897...160,095,140
JBrowse link
G Ins2 insulin 2 decreases expression ISO bromochloroacetic acid results in decreased expression of INS2 protein CTD PMID:21296659 NCBI chr 1:197,843,277...197,992,522
Ensembl chr 1:197,843,281...197,864,775
JBrowse link
G Itga8 integrin subunit alpha 8 decreases expression EXP bromochloroacetic acid results in decreased expression of ITGA8 mRNA CTD PMID:16460773 NCBI chr17:75,304,004...75,501,510
Ensembl chr17:75,304,008...75,501,510
JBrowse link
G Itgb1 integrin subunit beta 1 decreases expression EXP bromochloroacetic acid results in decreased expression of ITGB1 mRNA CTD PMID:16460773 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link
G Itgb2 integrin subunit beta 2 increases expression EXP bromochloroacetic acid results in increased expression of ITGB2 mRNA CTD PMID:16460773 NCBI chr20:11,061,394...11,097,656
Ensembl chr20:11,061,430...11,097,600
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase decreases expression ISO bromochloroacetic acid results in decreased expression of KIT protein CTD PMID:21296659 NCBI chr14:32,547,459...32,624,694
Ensembl chr14:32,548,877...32,624,652
JBrowse link
G Krt1 keratin 1 decreases expression ISO bromochloroacetic acid results in decreased expression of KRT1 protein CTD PMID:21296659 NCBI chr 7:132,976,618...132,981,844
Ensembl chr 7:132,976,620...132,981,844
JBrowse link
G Lama1 laminin subunit alpha 1 increases expression ISO bromochloroacetic acid results in increased expression of LAMA1 protein CTD PMID:21296659 NCBI chr 9:107,692,770...107,816,847
Ensembl chr 9:107,692,770...107,817,478
JBrowse link
G Lamb1 laminin subunit beta 1 decreases expression ISO bromochloroacetic acid results in decreased expression of LAMB1 protein CTD PMID:21296659 NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585
JBrowse link
G Lamc1 laminin subunit gamma 1 increases expression ISO bromochloroacetic acid results in increased expression of LAMC1 protein CTD PMID:21296659 NCBI chr13:65,374,372...65,501,492
Ensembl chr13:65,374,372...65,501,492
JBrowse link
G Lefty1 left right determination factor 1 affects expression ISO bromochloroacetic acid affects the expression of LEFTY1 protein CTD PMID:21296659 NCBI chr13:92,649,226...92,659,722
Ensembl chr13:92,656,323...92,659,720
JBrowse link
G Lifr LIF receptor subunit alpha increases expression ISO bromochloroacetic acid results in increased expression of LIFR protein CTD PMID:21296659 NCBI chr 2:56,224,393...56,292,988
Ensembl chr 2:56,250,120...56,286,699
JBrowse link
G Lin28a lin-28 homolog A decreases expression ISO bromochloroacetic acid results in decreased expression of LIN28A protein CTD PMID:21296659 NCBI chr 5:146,227,119...146,244,122
Ensembl chr 5:146,227,119...146,244,122
JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 increases expression EXP bromochloroacetic acid results in increased expression of MAPKAPK2 mRNA CTD PMID:16460773 NCBI chr13:42,513,762...42,560,061
Ensembl chr13:42,513,762...42,560,457
JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 decreases expression ISO bromochloroacetic acid results in decreased expression of MNX1 protein CTD PMID:21296659 NCBI chr 4:5,866,506...5,871,465
Ensembl chr 4:5,866,506...5,871,465
JBrowse link
G Msln mesothelin increases expression EXP bromochloroacetic acid results in increased expression of MSLN mRNA CTD PMID:16460773 NCBI chr10:14,771,946...14,781,382
Ensembl chr10:14,771,961...14,777,643
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor increases expression EXP bromochloroacetic acid results in increased expression of MYC mRNA CTD PMID:16460773 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Myf5 myogenic factor 5 decreases expression ISO bromochloroacetic acid results in decreased expression of MYF5 protein CTD PMID:21296659 NCBI chr 7:42,802,946...42,806,177
Ensembl chr 7:42,802,946...42,806,177
JBrowse link
G Myod1 myogenic differentiation 1 decreases expression ISO bromochloroacetic acid results in decreased expression of MYOD1 protein CTD PMID:21296659 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
JBrowse link
G Nanog Nanog homeobox increases expression ISO bromochloroacetic acid results in increased expression of NANOG protein CTD PMID:21296659 NCBI chr 4:155,943,737...155,951,116
Ensembl chr 4:155,943,737...155,951,116
JBrowse link
G Neurod1 neuronal differentiation 1 increases expression ISO bromochloroacetic acid results in increased expression of NEUROD1 protein CTD PMID:21296659 NCBI chr 3:64,360,222...64,363,526
Ensembl chr 3:64,359,395...64,363,649
JBrowse link
G Nodal nodal growth differentiation factor affects expression ISO bromochloroacetic acid affects the expression of NODAL protein CTD PMID:21296659 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
JBrowse link
G Nog noggin increases expression ISO bromochloroacetic acid results in increased expression of NOG protein CTD PMID:21296659 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
JBrowse link
G Nppa natriuretic peptide A increases expression ISO bromochloroacetic acid results in increased expression of NPPA protein CTD PMID:21296659 NCBI chr 5:158,429,042...158,430,351
Ensembl chr 5:158,429,042...158,430,351
JBrowse link
G Nr5a2 nuclear receptor subfamily 5, group A, member 2 increases expression ISO bromochloroacetic acid results in increased expression of NR5A2 protein CTD PMID:21296659 NCBI chr13:48,313,634...48,433,494
Ensembl chr13:48,316,301...48,433,326
JBrowse link
G Nras NRAS proto-oncogene, GTPase increases expression EXP bromochloroacetic acid results in increased expression of NRAS mRNA CTD PMID:16460773 NCBI chr 2:190,582,885...190,593,509
Ensembl chr 2:190,582,918...190,591,626
JBrowse link
G Olig2 oligodendrocyte transcription factor 2 decreases expression ISO bromochloroacetic acid results in decreased expression of OLIG2 protein CTD PMID:21296659 NCBI chr11:30,475,510...30,478,886
Ensembl chr11:30,475,398...30,480,152
JBrowse link
G Pax6 paired box 6 increases expression ISO bromochloroacetic acid results in increased expression of PAX6 protein CTD PMID:21296659 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
G Pdx1 pancreatic and duodenal homeobox 1 decreases expression ISO bromochloroacetic acid results in decreased expression of IPF1 protein CTD PMID:21296659 NCBI chr12:7,757,865...7,763,064
Ensembl chr12:7,757,865...7,763,064
JBrowse link
G Podxl podocalyxin-like increases expression ISO bromochloroacetic acid results in increased expression of PODXL protein CTD PMID:21296659 NCBI chr 4:60,135,124...60,181,829
Ensembl chr 4:60,135,109...60,181,899
JBrowse link
G Pou5f1 POU class 5 homeobox 1 increases expression ISO bromochloroacetic acid results in increased expression of POU5F1 protein CTD PMID:21296659 NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891
JBrowse link
G Ppp1r12a protein phosphatase 1, regulatory subunit 12A decreases expression EXP bromochloroacetic acid results in decreased expression of PPP1R12A mRNA CTD PMID:16460773 NCBI chr 7:43,482,808...43,593,689
Ensembl chr 7:43,482,803...43,593,425
JBrowse link
G Ppp2r2b protein phosphatase 2, regulatory subunit B, beta increases expression EXP bromochloroacetic acid results in increased expression of PPP2R2B mRNA CTD PMID:16460773 NCBI chr18:34,653,716...35,080,889
Ensembl chr18:34,653,721...35,081,025
JBrowse link
G Prkcz protein kinase C, zeta increases expression EXP bromochloroacetic acid results in increased expression of PRKCZ mRNA CTD PMID:16460773 NCBI chr 5:165,817,786...165,930,386
Ensembl chr 5:165,819,466...165,930,367
JBrowse link
G Rala RAS like proto-oncogene A decreases expression EXP bromochloroacetic acid results in decreased expression of RALA mRNA CTD PMID:16460773 NCBI chr17:47,092,139...47,145,192
Ensembl chr17:47,092,207...47,144,063
JBrowse link
G Rest RE1-silencing transcription factor decreases expression ISO bromochloroacetic acid results in decreased expression of REST protein CTD PMID:21296659 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354
JBrowse link
G Sema3a semaphorin 3A decreases expression ISO bromochloroacetic acid results in decreased expression of SEMA3A protein CTD PMID:21296659 NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 decreases expression ISO bromochloroacetic acid results in decreased expression of SFRP2 protein CTD PMID:21296659 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
JBrowse link
G Sox17 SRY-box transcription factor 17 decreases expression ISO bromochloroacetic acid results in decreased expression of SOX17 protein CTD PMID:21296659 NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228
JBrowse link
G Sox2 SRY-box transcription factor 2 affects expression ISO bromochloroacetic acid affects the expression of SOX2 protein CTD PMID:21296659 NCBI chr 2:117,536,929...117,539,338
Ensembl chr 2:117,536,929...117,539,338
JBrowse link
G Sst somatostatin increases expression ISO bromochloroacetic acid results in increased expression of SST protein CTD PMID:21296659 NCBI chr11:76,956,896...76,958,173
Ensembl chr11:76,956,896...76,958,173
JBrowse link
G Sycp3 synaptonemal complex protein 3 decreases expression ISO bromochloroacetic acid results in decreased expression of SYCP3 protein CTD PMID:21296659 NCBI chr 7:22,874,055...22,888,512
Ensembl chr 7:22,874,055...22,888,511
JBrowse link
G Syp synaptophysin decreases expression ISO bromochloroacetic acid results in decreased expression of SYP protein CTD PMID:21296659 NCBI chr  X:14,849,444...14,864,553
Ensembl chr  X:14,849,444...14,864,745
JBrowse link
G Tat tyrosine aminotransferase decreases expression ISO bromochloroacetic acid results in decreased expression of TAT protein CTD PMID:21296659 NCBI chr19:37,947,153...37,957,717
Ensembl chr19:37,947,112...37,958,031
JBrowse link
G Tbxt T-box transcription factor T increases expression ISO bromochloroacetic acid results in increased expression of T protein CTD PMID:21296659 NCBI chr 1:52,298,099...52,309,813
Ensembl chr 1:52,298,099...52,305,864
JBrowse link
G Tdgf1 teratocarcinoma-derived growth factor 1 increases expression ISO bromochloroacetic acid results in increased expression of TDGF1 protein CTD PMID:21296659 NCBI chr 8:110,924,774...110,938,545
Ensembl chr 8:110,925,024...110,930,308
JBrowse link
G Tert telomerase reverse transcriptase increases expression ISO bromochloroacetic acid results in increased expression of TERT protein CTD PMID:21296659 NCBI chr 1:29,637,213...29,659,509
Ensembl chr 1:29,637,506...29,659,561
JBrowse link
G Tgfb2 transforming growth factor, beta 2 decreases expression EXP bromochloroacetic acid results in decreased expression of TGFB2 mRNA CTD PMID:16460773 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
JBrowse link
G Tgfb3 transforming growth factor, beta 3 decreases expression EXP bromochloroacetic acid results in decreased expression of TGFB3 mRNA CTD PMID:16460773 NCBI chr 6:105,704,058...105,726,661
Ensembl chr 6:105,704,236...105,726,564
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 increases expression EXP bromochloroacetic acid results in increased expression of TGFBR2 mRNA CTD PMID:16460773 NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
JBrowse link
G Th tyrosine hydroxylase affects expression ISO bromochloroacetic acid affects the expression of TH protein CTD PMID:21296659 NCBI chr 1:198,071,500...198,078,832
Ensembl chr 1:198,071,503...198,109,767
JBrowse link
G Tp53 tumor protein p53 multiple interactions EXP bromochloroacetic acid promotes the reaction [Bromates results in increased phosphorylation of TP53 protein] CTD PMID:21864635 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Utf1 undifferentiated embryonic cell transcription factor 1 affects expression ISO bromochloroacetic acid affects the expression of UTF1 protein CTD PMID:21296659 NCBI chr 1:194,740,339...194,741,465
Ensembl chr 1:194,740,339...194,741,465
JBrowse link
G Wnt4 Wnt family member 4 increases expression EXP bromochloroacetic acid results in increased expression of WNT4 mRNA CTD PMID:16460773 NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
JBrowse link
G Wt1 WT1 transcription factor decreases expression ISO bromochloroacetic acid results in decreased expression of WT1 protein CTD PMID:21296659 NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643
JBrowse link
G Zfp42 zinc finger protein 42 increases expression ISO bromochloroacetic acid results in increased expression of ZFP42 protein CTD PMID:21296659 NCBI chr16:48,836,463...48,845,443 JBrowse link
dibromoacetic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 increases expression ISO dibromoacetic acid results in increased expression of ATF2 mRNA CTD PMID:29155130 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
JBrowse link
G Bcl2 BCL2, apoptosis regulator decreases expression ISO dibromoacetic acid results in decreased expression of BCL2 mRNA CTD PMID:18628252 NCBI chr13:22,689,783...22,853,920 JBrowse link
G Casp3 caspase 3 increases expression ISO dibromoacetic acid results in increased expression of CASP3 protein modified form CTD PMID:29155130 NCBI chr16:45,662,910...45,681,171
Ensembl chr16:45,662,910...45,684,648
JBrowse link
G Ces3a carboxylesterase 3a decreases expression EXP dibromoacetic acid results in decreased expression of CES3 mRNA CTD PMID:21046364 NCBI chr19:32,992,386...33,000,562 JBrowse link
G Col1a2 collagen type I alpha 2 chain decreases expression EXP dibromoacetic acid results in decreased expression of COL1A2 mRNA CTD PMID:21046364 NCBI chr 4:32,563,938...32,598,868
Ensembl chr 4:32,563,381...32,598,867
JBrowse link
G Cyp17a1 cytochrome P450, family 17, subfamily a, polypeptide 1 decreases expression EXP dibromoacetic acid results in decreased expression of CYP17A1 mRNA CTD PMID:21046364 NCBI chr 1:245,535,462...245,543,148
Ensembl chr 1:245,535,462...245,541,573
JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 decreases expression EXP dibromoacetic acid results in decreased expression of CYP1B1 mRNA CTD PMID:21046364 NCBI chr 6:15,342,312...15,350,886
Ensembl chr 6:15,342,344...15,350,917
JBrowse link
G Dpt dermatopontin decreases expression EXP dibromoacetic acid results in decreased expression of DPT mRNA CTD PMID:21046364 NCBI chr13:77,122,926...77,151,646
Ensembl chr13:77,123,115...77,151,639
JBrowse link
G Elk1 ETS transcription factor ELK1 increases expression ISO dibromoacetic acid results in increased expression of ELK1 mRNA CTD PMID:29155130 NCBI chr  X:1,138,826...1,155,713
Ensembl chr  X:1,139,756...1,155,713
JBrowse link
G Esr1 estrogen receptor 1 multiple interactions EXP dibromoacetic acid inhibits the reaction [Estradiol binds to ESR1 protein] CTD PMID:10580743 NCBI chr 1:41,106,335...41,499,104
Ensembl chr 1:41,210,475...41,495,002
JBrowse link
G Fads1 fatty acid desaturase 1 decreases expression EXP dibromoacetic acid results in decreased expression of FADS1 mRNA CTD PMID:21046364 NCBI chr 1:206,827,724...206,842,734
Ensembl chr 1:206,827,765...206,842,734
JBrowse link
G Fas Fas cell surface death receptor increases expression ISO dibromoacetic acid results in increased expression of FAS mRNA; dibromoacetic acid results in increased expression of FAS protein CTD PMID:18628252 NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
JBrowse link
G Faslg Fas ligand increases expression ISO dibromoacetic acid results in increased expression of FASL protein CTD PMID:18628252 NCBI chr13:74,151,519...74,172,760
Ensembl chr13:74,154,954...74,162,215
JBrowse link
G Hao2 hydroxyacid oxidase 2 decreases expression EXP dibromoacetic acid results in decreased expression of HAO2 mRNA CTD PMID:21046364 NCBI chr 2:186,200,137...186,232,997
Ensembl chr 2:186,200,504...186,224,425
JBrowse link
G Hba-a2 hemoglobin alpha, adult chain 2 decreases expression EXP dibromoacetic acid results in decreased expression of HBA-A2 mRNA CTD PMID:21046364 NCBI chr10:15,323,830...15,324,677 JBrowse link
G Hbb hemoglobin subunit beta decreases expression EXP dibromoacetic acid results in decreased expression of HBB mRNA CTD PMID:21046364 NCBI chr 1:158,250,421...158,251,832 JBrowse link
G Igfbp7 insulin-like growth factor binding protein 7 decreases expression EXP dibromoacetic acid results in decreased expression of IGFBP7 mRNA CTD PMID:21046364 NCBI chr14:30,737,414...30,797,317
Ensembl chr14:30,737,164...30,797,314
JBrowse link
G Insl3 insulin-like 3 decreases expression EXP dibromoacetic acid results in decreased expression of INSL3 mRNA CTD PMID:21046364 NCBI chr16:18,398,682...18,400,566
Ensembl chr16:18,384,829...18,400,560
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor decreases methylation ISO dibromoacetic acid results in decreased methylation of MYC promoter CTD PMID:16014735 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Traf2 Tnf receptor-associated factor 2 increases expression ISO dibromoacetic acid results in increased expression of TRAF2 mRNA CTD PMID:18628252 NCBI chr 3:8,341,950...8,366,609
Ensembl chr 3:8,341,951...8,366,538
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19821
    role 19769
      chemical role 19345
        donor 18654
          Bronsted acid 18537
            oxoacid 18498
              carbon oxoacid 18378
                carboxylic acid 18373
                  2-bromocarboxylic acid 143
                    2-bromodecanoic acid 0
                    2-bromohexadecanoic acid 20
                    bromochloroacetic acid 108
                    bromosuccinic acid 0
                    dibromoacetic acid 20
Path 2
Term Annotations click to browse term
  CHEBI ontology 19821
    subatomic particle 19819
      composite particle 19819
        hadron 19819
          baryon 19819
            nucleon 19819
              atomic nucleus 19819
                atom 19819
                  main group element atom 19716
                    p-block element atom 19716
                      carbon group element atom 19640
                        carbon atom 19630
                          organic molecular entity 19630
                            organic group 18737
                              organic divalent group 18728
                                organodiyl group 18728
                                  carbonyl group 18675
                                    carbonyl compound 18675
                                      carboxylic acid 18373
                                        2-bromocarboxylic acid 143
                                          2-bromodecanoic acid 0
                                          2-bromohexadecanoic acid 20
                                          bromochloroacetic acid 108
                                          bromosuccinic acid 0
                                          dibromoacetic acid 20
paths to the root