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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:8,5'-cyclo-2'-deoxyadenosine
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Accession:CHEBI:131825 term browser browse the term
Definition:An organic heterotetracyclic compound obtained by intramolecular formation of a C-C bond between positions 8 and 5' of 2'-deoxyadenosine.
Synonyms:exact_synonym: (6R,7S,8S,10R)-4-amino-7,8,9,10-tetrahydro-6H-7,10-epoxyazepino[1,2-e]purine-6,8-diol
 related_synonym: 2'-Deoxy-8,5'-cycloadenosine;   8,5'-Cda;   Formula=C10H11N5O3;   InChI=1S/C10H11N5O3/c11-8-5-9(13-2-12-8)15-4-1-3(16)7(18-4)6(17)10(15)14-5/h2-4,6-7,16-17H,1H2,(H2,11,12,13)/t3-,4+,6-,7-/m0/s1;   InChIKey=MBVGIEDXZGVICG-FXZMZVCPSA-N;   SMILES=[C@H]12N3C=4N=CN=C(C4N=C3[C@H]([C@]([C@H](C1)O)(O2)[H])O)N;   cyclo-dA;   cyclodA
 xref: CAS:117182-88-4
 xref_mesh: MESH:C056752
 xref: PMID:22817898;   PMID:23961697;   PMID:24471831;   PMID:25034731;   PMID:25605892;   PMID:26344223;   Reaxys:8118367



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8,5'-cyclo-2'-deoxyadenosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neil1 nei-like DNA glycosylase 1 affects metabolic processing ISO NEIL1 protein affects the metabolism of 8,5'-cyclo-2'-deoxyadenosine CTD PMID:20067321 NCBI chr 8:57,550,142...57,556,884
Ensembl chr 8:57,550,147...57,556,258
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  CHEBI ontology 19812
    role 19763
      application 19477
        refrigerant 17699
          ammonia 17288
            organic amino compound 17288
              aromatic amine 13711
                8,5'-cyclo-2'-deoxyadenosine 1
Path 2
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  CHEBI ontology 19812
    subatomic particle 19811
      composite particle 19811
        hadron 19811
          baryon 19811
            nucleon 19811
              atomic nucleus 19811
                atom 19811
                  main group element atom 19710
                    p-block element atom 19710
                      carbon group element atom 19631
                        carbon atom 19621
                          organic molecular entity 19621
                            heteroorganic entity 19290
                              organochalcogen compound 19063
                                organooxygen compound 19014
                                  carbohydrates and carbohydrate derivatives 12352
                                    carbohydrate 12352
                                      carbohydrate derivative 11956
                                        glycosyl compound 10990
                                          N-glycosyl compound 5521
                                            nucleoside 5382
                                              deoxyribonucleoside 2739
                                                2'-deoxyribonucleoside 2221
                                                  purine 2'-deoxyribonucleoside 33
                                                    purines 2'-deoxy-D-ribonucleoside 14
                                                      2'-deoxyadenosine 8
                                                        8,5'-cyclo-2'-deoxyadenosine 1
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