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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:lysophosphatidylcholine (18:1/0:0)
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Accession:CHEBI:131739 term browser browse the term
Definition:A lysophosphatidylcholine 18:1 in which the acyl group is located at position 1.
Synonyms:related_synonym: Formula=C26H52NO7P;   LPC(18:1/0:0);   PC(18:1/0:0);   SMILES=[C@@H](COC(=O)*)(COP(OCC[N+](C)(C)C)(=O)[O-])O
 xref: PMID:26860358



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1-O-oleoyl-sn-glycero-3-phosphocholine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr5a2 nuclear receptor subfamily 5, group A, member 2 multiple interactions ISO [NR5A2 gene mutant form results in increased susceptibility to Dietary Fats] which results in increased abundance of 1-oleoyl lysophosphatidylcholine CTD PMID:29515023 NCBI chr13:48,313,634...48,433,494
Ensembl chr13:48,316,301...48,433,326
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G Smad3 SMAD family member 3 decreases abundance ISO SMAD3 protein results in decreased abundance of 1-oleoyl lysophosphatidylcholine CTD PMID:23034213 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 20056
    role 20008
      biological role 20007
        biochemical role 19640
          metabolite 19623
            eukaryotic metabolite 19326
              plant metabolite 17657
                lysophosphatidylcholine (18:1/0:0) 2
                  1-O-oleoyl-sn-glycero-3-phosphocholine 2
                  1-[(11Z)-octadecenoyl]-sn-glycero-3-phosphocholine 0
                  1-elaidoyl-sn-glycero-3-phosphocholine 0
                  PC(18:1(6Z)/0:0) 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 20056
    subatomic particle 20054
      composite particle 20054
        hadron 20054
          baryon 20054
            nucleon 20054
              atomic nucleus 20054
                atom 20054
                  main group element atom 19956
                    p-block element atom 19956
                      chalcogen 19693
                        oxygen atom 19666
                          oxygen molecular entity 19666
                            hydroxides 19412
                              oxoacid 18715
                                pnictogen oxoacid 11007
                                  phosphorus oxoacid 9812
                                    phosphoric acids 8640
                                      phosphoric acid 8640
                                        phosphoric acid derivative 8344
                                          phosphate 8344
                                            organic phosphate 8343
                                              phospholipid 310
                                                glycerophospholipid 209
                                                  glycerophosphocholine 123
                                                    lysophosphatidylcholine 33
                                                      2-lysophosphatidylcholine 4
                                                        1-O-acyl-sn-glycero-3-phosphocholine 4
                                                          lysophosphatidylcholine (18:1/0:0) 2
                                                            1-O-oleoyl-sn-glycero-3-phosphocholine 2
                                                            1-[(11Z)-octadecenoyl]-sn-glycero-3-phosphocholine 0
                                                            1-elaidoyl-sn-glycero-3-phosphocholine 0
                                                            PC(18:1(6Z)/0:0) 0
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