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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:scyllo-inositol
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Accession:CHEBI:10642 term browser browse the term
Definition:An inositol that has formula C6H12O6.
Synonyms:related_synonym: (1r,2r,3r,4r,5r,6r)-cyclohexane-1,2,3,4,5,6-hexol;   1,3,5/2,4,6-cyclohexanehexol;   Cocositol;   Formula=C6H12O6;   InChI=1S/C6H12O6/c7-1-2(8)4(10)6(12)5(11)3(1)9/h1-12H/t1-,2-,3+,4+,5-,6-;   InChIKey=CDAISMWEOUEBRE-CDRYSYESSA-N;   Quercinitol;   SMILES=O[C@H]1[C@H](O)[C@@H](O)[C@H](O)[C@@H](O)[C@@H]1O;   Scyllitol
 alt_id: CHEBI:26614
 xref: Beilstein:2206312;   CAS:488-59-5;   Gmelin:561300;   KEGG:C06153;   PMID:24352657;   Reaxys:2206312

show annotations for term's descendants           Sort by:
 
isepamicin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgd phosphogluconate dehydrogenase decreases activity EXP isepamicin results in decreased activity of PGD protein CTD PMID:15558954 NCBI chr 5:165,966,128...165,982,327 JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel increases expression ISO isepamicin results in increased expression of PKD2 protein mutant form CTD PMID:15001556 NCBI chr14:6,602,004...6,645,257
Ensembl chr14:6,602,004...6,645,257 		JBrowse link
netilmycin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgd phosphogluconate dehydrogenase decreases activity EXP Netilmicin results in decreased activity of PGD protein CTD PMID:15558954 NCBI chr 5:165,966,128...165,982,327 JBrowse link
paromomycin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase increases expression ISO Paromomycin results in increased expression of ATM protein mutant form CTD PMID:15498871 NCBI chr 8:58,015,938...58,119,973
Ensembl chr 8:58,015,940...58,120,045 		JBrowse link
streptomycin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxb9 homeo box B9 multiple interactions ISO [Penicillins co-treated with Streptomycin] results in increased expression of HOXB9 mRNA CTD PMID:31711903 NCBI chr10:84,119,772...84,124,963
Ensembl chr10:84,119,884...84,123,390 		JBrowse link
G Pax3 paired box 3 multiple interactions ISO [Penicillins co-treated with Streptomycin] results in increased expression of PAX3 mRNA CTD PMID:31711903 NCBI chr 9:84,004,004...84,101,226
Ensembl chr 9:84,005,183...84,101,172 		JBrowse link
G Tcf15 transcription factor 15 multiple interactions ISO [Penicillins co-treated with Streptomycin] results in increased expression of TCF15 mRNA CTD PMID:31711903 NCBI chr 3:147,643,250...147,649,511
Ensembl chr 3:147,643,250...147,649,504 		JBrowse link
G Tnf tumor necrosis factor multiple interactions ISO Streptomycin inhibits the reaction [Lipopolysaccharides results in increased expression of TNF protein] CTD PMID:17699551 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000 		JBrowse link
G Uncx UNC homeobox multiple interactions ISO [Penicillins co-treated with Streptomycin] results in increased expression of UNCX mRNA CTD PMID:31711903 NCBI chr12:17,182,158...17,186,679
Ensembl chr12:17,182,163...17,186,679 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19792
    role 19738
      biological role 19737
        biochemical role 19241
          metabolite 19218
            eukaryotic metabolite 18842
              animal metabolite 18569
                mammalian metabolite 18558
                  human metabolite 18231
                    scyllo-inositol 8
                      1-amino-1-deoxy-scyllo-inositol 0
                      1-guanidino-1-deoxy-scyllo-inositol 0
                      1D-1-guanidino-1-deoxy-3-dehydro-scyllo-inositol 0
                      1D-3-amino-1-guanidino-1,3-dideoxy-scyllo-inositol 0
                      1D-3-amino-1-guanidino-1,3-dideoxy-scyllo-inositol 4-phosphate 0
                      1D-3-amino-1-guanidino-1,3-dideoxy-scyllo-inositol 6-phosphate 0
                      2,4,6/3,5-pentahydroxycyclohexanone 0
                      2-deoxy-scyllo-inosamine 0
                      2-deoxy-scyllo-inosose 0
                      3-amino-2,3-dideoxy-scyllo-inosose 0
                      3-dehydro-scyllo-inosose 0
                      streptamine + 3
                      streptidine + 5
Path 2
Term Annotations click to browse term
  CHEBI ontology 19792
    subatomic particle 19788
      composite particle 19788
        hadron 19788
          baryon 19788
            nucleon 19788
              atomic nucleus 19788
                atom 19788
                  main group element atom 19675
                    p-block element atom 19675
                      chalcogen 19382
                        oxygen atom 19343
                          oxygen molecular entity 19343
                            hydroxides 19091
                              organic hydroxy compound 18658
                                polyol 7810
                                  cyclitol 2455
                                    inositol 41
                                      scyllo-inositol 8
                                        1-amino-1-deoxy-scyllo-inositol 0
                                        1-guanidino-1-deoxy-scyllo-inositol 0
                                        1D-1-guanidino-1-deoxy-3-dehydro-scyllo-inositol 0
                                        1D-3-amino-1-guanidino-1,3-dideoxy-scyllo-inositol 0
                                        1D-3-amino-1-guanidino-1,3-dideoxy-scyllo-inositol 4-phosphate 0
                                        1D-3-amino-1-guanidino-1,3-dideoxy-scyllo-inositol 6-phosphate 0
                                        2,4,6/3,5-pentahydroxycyclohexanone 0
                                        2-deoxy-scyllo-inosamine 0
                                        2-deoxy-scyllo-inosose 0
                                        3-amino-2,3-dideoxy-scyllo-inosose 0
                                        3-dehydro-scyllo-inosose 0
                                        streptamine + 3
                                        streptidine + 5
paths to the root

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