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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:scyllo-inositol
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Accession:CHEBI:10642 term browser browse the term
Definition:An inositol that has formula C6H12O6.
Synonyms:related_synonym: (1r,2r,3r,4r,5r,6r)-cyclohexane-1,2,3,4,5,6-hexol;   1,3,5/2,4,6-cyclohexanehexol;   Cocositol;   Formula=C6H12O6;   InChI=1S/C6H12O6/c7-1-2(8)4(10)6(12)5(11)3(1)9/h1-12H/t1-,2-,3+,4+,5-,6-;   InChIKey=CDAISMWEOUEBRE-CDRYSYESSA-N;   Quercinitol;   SMILES=O[C@H]1[C@H](O)[C@@H](O)[C@H](O)[C@@H](O)[C@@H]1O;   Scyllitol
 alt_id: CHEBI:26614
 xref: CAS:488-59-5;   Gmelin:561300;   KEGG:C06153;   PMID:24352657;   Reaxys:2206312


show annotations for term's descendants           Sort by:
isepamicin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgd phosphogluconate dehydrogenase decreases activity EXP isepamicin results in decreased activity of PGD protein CTD PMID:15558954 NCBI chr 5:164,865,830...164,882,029
Ensembl chr 5:164,865,830...164,882,029 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel increases expression ISO isepamicin results in increased expression of PKD2 protein mutant form CTD PMID:15001556 NCBI chr14:5,541,821...5,585,140 JBrowse link
netilmycin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgd phosphogluconate dehydrogenase decreases activity EXP Netilmicin results in decreased activity of PGD protein CTD PMID:15558954 NCBI chr 5:164,865,830...164,882,029
Ensembl chr 5:164,865,830...164,882,029 		JBrowse link
paromomycin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase increases expression ISO Paromomycin results in increased expression of ATM protein mutant form CTD PMID:15498871 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:62,727,291...62,828,629 		JBrowse link
streptomycin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxb9 homeo box B9 multiple interactions ISO [Penicillins co-treated with Streptomycin] results in increased expression of HOXB9 mRNA CTD PMID:31711903 NCBI chr10:81,733,857...81,737,363
Ensembl chr10:81,733,658...81,738,872 		JBrowse link
G Pax3 paired box 3 multiple interactions ISO [Penicillins co-treated with Streptomycin] results in increased expression of PAX3 mRNA CTD PMID:31711903 NCBI chr 9:87,015,960...87,112,531
Ensembl chr 9:87,016,999...87,124,141 		JBrowse link
G Tcf15 transcription factor 15 multiple interactions ISO [Penicillins co-treated with Streptomycin] results in increased expression of TCF15 mRNA CTD PMID:31711903 NCBI chr 3:161,099,301...161,105,083
Ensembl chr 3:161,099,301...161,105,083 		JBrowse link
G Tnf tumor necrosis factor multiple interactions ISO Streptomycin inhibits the reaction [Lipopolysaccharides results in increased expression of TNF protein] CTD PMID:17699551 NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,626,532...3,629,303 		JBrowse link
G Uncx UNC homeobox multiple interactions ISO [Penicillins co-treated with Streptomycin] results in increased expression of UNCX mRNA CTD PMID:31711903 NCBI chr12:20,206,604...20,211,125
Ensembl chr12:20,206,609...20,211,125 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 20862
    role 20820
      biological role 20818
        biochemical role 20264
          metabolite 20245
            eukaryotic metabolite 19958
              animal metabolite 19803
                mammalian metabolite 19802
                  human metabolite 19220
                    scyllo-inositol 8
                      1-amino-1-deoxy-scyllo-inositol 0
                      1-guanidino-1-deoxy-scyllo-inositol 0
                      1D-1-guanidino-1-deoxy-3-dehydro-scyllo-inositol 0
                      1D-3-amino-1-guanidino-1,3-dideoxy-scyllo-inositol 0
                      1D-3-amino-1-guanidino-1,3-dideoxy-scyllo-inositol 4-phosphate 0
                      1D-3-amino-1-guanidino-1,3-dideoxy-scyllo-inositol 6-phosphate 0
                      2-deoxy-4-epi-scyllo-inosose 0
                      2-deoxy-scyllo-inosamine 0
                      2-deoxy-scyllo-inosose 0
                      3-amino-2,3-dideoxy-scyllo-inosose 0
                      3-dehydro-scyllo-inosose 0
                      myo-2-inosose 0
                      scyllo-inositol 1-phosphate(2-) 0
                      streptamine + 3
                      streptidine + 5
Path 2
Term Annotations click to browse term
  CHEBI ontology 20862
    subatomic particle 20860
      composite particle 20860
        hadron 20860
          baryon 20860
            nucleon 20860
              atomic nucleus 20860
                atom 20860
                  main group element atom 20781
                    p-block element atom 20781
                      chalcogen 20491
                        oxygen atom 20457
                          oxygen molecular entity 20457
                            hydroxides 20230
                              organic hydroxy compound 19765
                                polyol 11998
                                  cyclitol 7565
                                    inositol 58
                                      scyllo-inositol 8
                                        1-amino-1-deoxy-scyllo-inositol 0
                                        1-guanidino-1-deoxy-scyllo-inositol 0
                                        1D-1-guanidino-1-deoxy-3-dehydro-scyllo-inositol 0
                                        1D-3-amino-1-guanidino-1,3-dideoxy-scyllo-inositol 0
                                        1D-3-amino-1-guanidino-1,3-dideoxy-scyllo-inositol 4-phosphate 0
                                        1D-3-amino-1-guanidino-1,3-dideoxy-scyllo-inositol 6-phosphate 0
                                        2-deoxy-4-epi-scyllo-inosose 0
                                        2-deoxy-scyllo-inosamine 0
                                        2-deoxy-scyllo-inosose 0
                                        3-amino-2,3-dideoxy-scyllo-inosose 0
                                        3-dehydro-scyllo-inosose 0
                                        myo-2-inosose 0
                                        scyllo-inositol 1-phosphate(2-) 0
                                        streptamine + 3
                                        streptidine + 5
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