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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:scyllo-inositol
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Accession:CHEBI:10642 term browser browse the term
Definition:An inositol that has formula C6H12O6.
Synonyms:related_synonym: (1r,2r,3r,4r,5r,6r)-cyclohexane-1,2,3,4,5,6-hexol;   1,3,5/2,4,6-cyclohexanehexol;   Cocositol;   Formula=C6H12O6;   InChI=1S/C6H12O6/c7-1-2(8)4(10)6(12)5(11)3(1)9/h1-12H/t1-,2-,3+,4+,5-,6-;   InChIKey=CDAISMWEOUEBRE-CDRYSYESSA-N;   Quercinitol;   SMILES=O[C@H]1[C@H](O)[C@@H](O)[C@H](O)[C@@H](O)[C@@H]1O;   Scyllitol
 alt_id: CHEBI:26614
 xref: Beilstein:2206312;   CAS:488-59-5;   Gmelin:561300;   KEGG:C06153;   PMID:24352657;   Reaxys:2206312

show annotations for term's descendants           Sort by:
 
isepamicin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgd phosphogluconate dehydrogenase decreases activity EXP isepamicin results in decreased activity of PGD protein CTD PMID:15558954 NCBI chr 5:159,582,746...159,598,945 JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel increases expression ISO isepamicin results in increased expression of PKD2 protein mutant form CTD PMID:15001556 NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825 		JBrowse link
netilmycin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgd phosphogluconate dehydrogenase decreases activity EXP Netilmicin results in decreased activity of PGD protein CTD PMID:15558954 NCBI chr 5:159,582,746...159,598,945 JBrowse link
paromomycin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase increases expression ISO Paromomycin results in increased expression of ATM protein mutant form CTD PMID:15498871 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
streptomycin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxb9 homeo box B9 multiple interactions ISO [Penicillins co-treated with Streptomycin] results in increased expression of HOXB9 mRNA CTD PMID:31711903 NCBI chr10:81,237,312...81,240,818
Ensembl chr10:81,237,312...81,240,818 		JBrowse link
G Pax3 paired box 3 multiple interactions ISO [Penicillins co-treated with Streptomycin] results in increased expression of PAX3 mRNA CTD PMID:31711903 NCBI chr 9:79,567,455...79,664,042
Ensembl chr 9:79,568,634...79,664,042 		JBrowse link
G Tcf15 transcription factor 15 multiple interactions ISO [Penicillins co-treated with Streptomycin] results in increased expression of TCF15 mRNA CTD PMID:31711903 NCBI chr 3:140,638,984...140,644,766
Ensembl chr 3:140,638,984...140,644,766 		JBrowse link
G Tnf tumor necrosis factor multiple interactions ISO Streptomycin inhibits the reaction [Lipopolysaccharides results in increased expression of TNF protein] CTD PMID:17699551 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629 		JBrowse link
G Uncx UNC homeobox multiple interactions ISO [Penicillins co-treated with Streptomycin] results in increased expression of UNCX mRNA CTD PMID:31711903 NCBI chr12:15,092,779...15,097,300
Ensembl chr12:15,092,784...15,097,300 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19821
    role 19769
      biological role 19769
        biochemical role 19389
          metabolite 19364
            eukaryotic metabolite 19052
              animal metabolite 18892
                mammalian metabolite 18891
                  human metabolite 18351
                    scyllo-inositol 8
                      1-amino-1-deoxy-scyllo-inositol 0
                      1-guanidino-1-deoxy-scyllo-inositol 0
                      1D-1-guanidino-1-deoxy-3-dehydro-scyllo-inositol 0
                      1D-3-amino-1-guanidino-1,3-dideoxy-scyllo-inositol 0
                      1D-3-amino-1-guanidino-1,3-dideoxy-scyllo-inositol 4-phosphate 0
                      1D-3-amino-1-guanidino-1,3-dideoxy-scyllo-inositol 6-phosphate 0
                      2,4,6/3,5-pentahydroxycyclohexanone 0
                      2-deoxy-scyllo-inosamine 0
                      2-deoxy-scyllo-inosose 0
                      3-amino-2,3-dideoxy-scyllo-inosose 0
                      3-dehydro-scyllo-inosose 0
                      streptamine + 3
                      streptidine + 5
Path 2
Term Annotations click to browse term
  CHEBI ontology 19821
    subatomic particle 19819
      composite particle 19819
        hadron 19819
          baryon 19819
            nucleon 19819
              atomic nucleus 19819
                atom 19819
                  main group element atom 19716
                    p-block element atom 19716
                      chalcogen 19469
                        oxygen atom 19445
                          oxygen molecular entity 19445
                            hydroxides 19180
                              organic hydroxy compound 18672
                                polyol 8074
                                  cyclitol 2456
                                    inositol 41
                                      scyllo-inositol 8
                                        1-amino-1-deoxy-scyllo-inositol 0
                                        1-guanidino-1-deoxy-scyllo-inositol 0
                                        1D-1-guanidino-1-deoxy-3-dehydro-scyllo-inositol 0
                                        1D-3-amino-1-guanidino-1,3-dideoxy-scyllo-inositol 0
                                        1D-3-amino-1-guanidino-1,3-dideoxy-scyllo-inositol 4-phosphate 0
                                        1D-3-amino-1-guanidino-1,3-dideoxy-scyllo-inositol 6-phosphate 0
                                        2,4,6/3,5-pentahydroxycyclohexanone 0
                                        2-deoxy-scyllo-inosamine 0
                                        2-deoxy-scyllo-inosose 0
                                        3-amino-2,3-dideoxy-scyllo-inosose 0
                                        3-dehydro-scyllo-inosose 0
                                        streptamine + 3
                                        streptidine + 5
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