Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 41,148 (bp)   Positions: 105
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
LL/MavRrrc (KNAW) 
.37
.005
.014
.017
.009
.007
.024
.004
.062
.017
.52
.109
.077
.112
.004
.001
.001
.005
.002
.755
.004
.003
.006
.003
.0
.124
.001
.008
.001
.031
.002
.0
.001
.004
.008
.0
.003
.015
.17
.036
.181
.0
.099
.025
.08
.0
.0
.001
.058
.003
.153
--
.988
.001
.002
.002
.019
.001
--
.007
.311
.127
.089
.046
.151
.075
.009
.028
.034
.003
.015
.0
.0
.0
.0
.448
.118
--
--
.525
.005
.001
.031
.122
.762
.012
.135
.001
.0
.015
.003
.006
.353
.035
.05
.327
.0
.005
.007
.009
.052
.585
.92
.002
.492
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Ugp2
Ugp2
Ugp2
Ugp2
Ugp2
Ugp2
Ugp2
Ugp2
Ugp2
Ugp2
Ugp2
A
C
C
3
2
C
G
A
T
C
A
A
G
G
9
A
C
C
G
C
G
T
A
C
10
C
C
G
A
G
G
T
T
G
T
C
C
T
C
A
A
G
T
C
3
C
C
C
A
T
G
C
G
C
C
T
C
A
G
3
T
T
A
7
T
T
T
T
T
A
G
A
C
C
4
G
C
T
G
T
C
G
C
T
T
G
16
3
A
C
59
T
G
A
A
A
A
T
T
T
G
C
A
C
G
  106,275,406
  106,275,770
  106,275,972
  106,276,180
  106,276,181
  106,276,200
  106,276,209
  106,276,253
  106,276,588
  106,276,817
  106,277,087
  106,277,377
  106,277,857
  106,278,049
  106,278,497
  106,278,531
  106,278,532
  106,279,535
  106,279,658
  106,279,863
  106,280,009
  106,280,324
  106,280,663
  106,280,669
  106,280,688
  106,281,371
  106,281,744
  106,281,859
  106,282,754
  106,283,718
  106,284,428
  106,284,541
  106,284,585
  106,284,880
  106,285,043
  106,285,329
  106,285,858
  106,285,926
  106,286,333
  106,286,559
  106,286,865
  106,286,968
  106,286,996
  106,287,018
  106,287,578
  106,287,745
  106,287,780
  106,287,799
  106,287,837
  106,288,047
  106,289,120
  106,290,350
  106,290,712
  106,290,926
  106,291,087
  106,291,258
  106,291,674
  106,291,843
  106,293,319
  106,293,704
  106,294,141
  106,294,540
  106,295,129
  106,296,248
  106,296,711
  106,296,744
  106,297,035
  106,297,102
  106,297,340
  106,297,526
  106,298,299
  106,298,640
  106,299,003
  106,299,379
  106,299,994
  106,301,216
  106,301,669
  106,301,754
  106,301,829
  106,306,103
  106,306,276
  106,306,279
  106,306,288
  106,307,128
  106,307,410
  106,308,237
  106,308,274
  106,308,578
  106,309,482
  106,309,931
  106,309,962
  106,310,059
  106,310,144
  106,310,309
  106,310,862
  106,311,106
  106,311,998
  106,312,990
  106,313,337
  106,313,383
  106,314,122
  106,314,296
  106,314,835
  106,314,885
  106,314,900
A/-
T
T
3/-
2/-
5
T
G
C
A
2
G
A
A
-
2
T
T
A
T
C
C
G
A
-
3
T
A
T
A
-
3
C
-
C
T
T
6
T
2
G
A
C
T
-
T
T
T
G
C
G/45
G
A
T
G
C
T
G
T
-
C
51
5
-
C
C
C
C
3
-
2
2
G
T
-
2
A
C
A
A
-
2
T
2
A
A
-
-
T
T
-
A
A
-
G
T
G
C
C
C
A
T
G
T
T