Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 42,006 (bp)   Positions: 80
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
SS/Jr (KNAW) 
.008
.001
.013
.034
.012
.005
.008
.012
.024
.06
.049
.596
.12
.048
.154
.013
.607
.0
.003
.003
.036
.01
.001
.086
.001
.433
.552
.062
.001
--
.057
.012
.001
.001
.0
.92
.766
.0
.006
.0
.0
.0
.002
--
--
--
.008
.001
.001
.002
.001
.0
.107
.039
.0
.001
.002
.002
.005
.003
.001
.012
.01
.004
.057
.065
.054
.005
.002
.009
.002
.019
.004
.002
.001
.012
.9
.994
.864
.11
Trim55
Trim55
Trim55
Trim55
Trim55
Trim55
Trim55
Trim55
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
G
C
A
T
T
A
G
G
G
G
5
T
T
8
2
T
4
T
A
A
C
T
C
G
G
12
10
33
T
G
T
T
C
C
T
C
A
A
C
T
T
A
G
A
T
A
2
T
G
G
G
A
9
C
C
G
G
3
2
A
C
A
G
G
C
15
T
T
T
A
T
T
C
T
T
C
C
T
C
T
  124,140,145
  124,140,706
  124,141,600
  124,142,825
  124,143,379
  124,143,382
  124,143,384
  124,143,388
  124,143,392
  124,143,423
  124,143,753
  124,144,394
  124,144,877
  124,146,614
  124,147,425
  124,147,434
  124,147,808
  124,149,650
  124,151,220
  124,153,207
  124,153,582
  124,153,738
  124,153,814
  124,153,875
  124,154,542
  124,155,105
  124,155,107
  124,155,641
  124,155,966
  124,157,916
  124,159,475
  124,159,959
  124,160,612
  124,163,039
  124,163,807
  124,164,739
  124,165,426
  124,165,622
  124,167,379
  124,167,424
  124,169,529
  124,169,770
  124,170,326
  124,171,069
  124,171,273
  124,171,288
  124,171,817
  124,171,835
  124,171,843
  124,171,888
  124,173,318
  124,175,113
  124,175,432
  124,175,469
  124,175,704
  124,175,946
  124,176,172
  124,176,427
  124,176,428
  124,177,148
  124,177,242
  124,177,434
  124,178,139
  124,178,417
  124,178,791
  124,178,905
  124,179,120
  124,179,476
  124,179,772
  124,179,875
  124,179,967
  124,180,019
  124,180,340
  124,180,370
  124,180,753
  124,180,838
  124,181,152
  124,181,284
  124,181,752
  124,181,917
A
A
T
C
12
C
5
13
2
GA/4
5/-
7
A
-
-
G
4/-
C
T
G
T
C
T
A
3
12/-
-
-
A
A
G
A
T
G
5
3
G
2
T
C
2
G
T
T
T/9
G
-
2
-
A
A
G
-
G
G
C
T
3/-
2/-
G
T
G
C
T
T
-
C
-
C
G
4
G
T
C
C
A
A
C
T
C