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  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 364,863 (bp)   Positions: 247
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
F344/NRrrc (SOLiD) (KNAW) 
.0
.0
.001
.327
.004
.001
.0
--
.069
.003
.012
.079
.008
.085
.005
.4
.02
.921
.002
.989
.022
.004
.019
.0
.008
.001
.027
.768
.068
.116
.004
.001
.0
.0
.033
--
.066
.03
.858
.131
.007
.001
.021
.021
.009
.024
.524
.043
.138
.0
.0
.009
.013
.001
.003
.011
.001
--
.002
--
--
.092
.0
.015
.001
.002
.001
.225
--
.006
.671
.021
.017
.018
.02
--
.143
.041
--
.043
--
--
.021
.01
.015
.003
.0
.102
.003
--
--
--
.002
.002
--
--
--
.069
.043
.05
--
--
--
.18
.074
.03
.168
.181
.063
.051
.315
.051
.444
.087
.035
.287
.013
--
--
.238
.121
.078
.324
.06
--
--
.002
.0
.002
--
.0
.168
.037
.023
.302
.233
--
--
--
--
--
--
.059
--
--
.503
.019
--
.009
--
--
--
--
.008
.036
.007
.34
.386
.23
.077
.261
.002
.002
.007
.128
.241
.055
.009
.033
.531
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.633
.155
--
.037
.005
--
--
.011
.052
.006
.003
.002
.061
.001
.001
.012
.055
.113
--
.061
.001
.028
--
.046
.085
.138
.055
.075
.068
--
.015
.109
.175
.035
.161
.471
.461
.66
--
.035
.003
.002
.0
.01
.008
.002
.0
.001
.001
.055
.001
.133
.0
.017
.006
.101
.092
.0
.003
.053
.058
.059
.047
--
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--
--
--
--
--
--
--
--
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--
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LOC102546680
--
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--
--
--
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--
Tjp1
Tjp1
Tjp1
Tjp1
Tjp1
Tjp1
Tjp1
Tjp1
Tjp1
Tjp1
Tjp1
Tjp1
Tjp1
Tjp1
Tjp1
Tjp1
Tjp1
Tjp1
Tjp1
Tjp1
Tjp1
Tjp1
Tjp1
Tjp1
Tjp1
G
2
C
G
G
C
T
48
A
C
T
A
C
T
G
C
A
T
A
T
A
A
G
C
T
C
G
9
G
C
G
T
T
G
G
G
T
A
G
A
T
C
A
T
C
T
A
A
A
G
T
C
G
G
G
T
3
T
C
T
G
A
T
C
6
C
3
A
G
A
C
G
A
A
A
G
C
T
G
G
127
G
G
C
3
C
T
C
T
A
T
C
G
C
G
T
C
G
G
T
G
C
A
T
A
T
C
C
G
A
C
A
G
A
G
T
T
T
A
G
T
A
G
T
G
A
6
G
G
G
T
T
G
T
C
G
C
G
G
T
G
C
G
2
A
T
T
A
C
C
A
A
C
C
T
A
T
C
G
16
T
G
C
T
T
T
C
A
T
G
6
G
A
A
C
T
C
G
C
G
G
G
A
A
G
T
G
4
C
T
A
C
A
C
A
C
A
G
G
C
G
C
A
A
12
A
A
T
T
A
7
G
A
G
A
C
G
G
T
C
T
A
C
G
A
C
C
C
A
A
T
A
G
G
T
A
T
T
A
G
T
T
T
C
C
A
C
  127,247,460
  127,248,799
  127,250,941
  127,251,323
  127,251,506
  127,251,584
  127,251,591
  127,251,758
  127,251,964
  127,252,157
  127,252,179
  127,252,268
  127,252,404
  127,252,439
  127,252,653
  127,254,031
  127,254,182
  127,259,223
  127,260,255
  127,262,096
  127,263,642
  127,263,692
  127,263,719
  127,264,086
  127,266,787
  127,268,348
  127,268,752
  127,269,120
  127,270,007
  127,271,526
  127,271,654
  127,273,118
  127,274,662
  127,275,282
  127,278,107
  127,278,180
  127,278,327
  127,278,786
  127,279,481
  127,280,520
  127,281,975
  127,282,776
  127,284,747
  127,286,621
  127,286,626
  127,286,878
  127,287,212
  127,287,427
  127,288,148
  127,288,484
  127,288,819
  127,288,964
  127,289,521
  127,290,898
  127,291,646
  127,292,547
  127,293,980
  127,297,114
  127,300,132
  127,301,420
  127,301,477
  127,304,591
  127,322,325
  127,327,870
  127,328,324
  127,349,790
  127,349,797
  127,361,110
  127,385,881
  127,405,191
  127,407,497
  127,423,953
  127,423,957
  127,423,960
  127,424,018
  127,432,104
  127,442,713
  127,464,628
  127,474,552
  127,476,617
  127,479,638
  127,491,089
  127,494,851
  127,495,339
  127,495,511
  127,495,573
  127,495,591
  127,495,952
  127,496,126
  127,499,079
  127,499,281
  127,499,949
  127,500,559
  127,500,800
  127,501,534
  127,501,684
  127,501,849
  127,502,664
  127,503,526
  127,504,196
  127,504,676
  127,504,838
  127,505,683
  127,505,726
  127,505,799
  127,505,895
  127,506,160
  127,506,215
  127,506,520
  127,507,055
  127,507,251
  127,507,520
  127,507,565
  127,508,009
  127,508,166
  127,508,327
  127,508,436
  127,508,654
  127,509,417
  127,509,760
  127,509,795
  127,509,896
  127,510,054
  127,510,810
  127,512,098
  127,512,113
  127,513,257
  127,513,702
  127,514,239
  127,514,515
  127,514,793
  127,515,163
  127,515,261
  127,516,009
  127,516,445
  127,517,360
  127,518,756
  127,518,889
  127,519,321
  127,521,301
  127,524,632
  127,524,817
  127,526,018
  127,526,682
  127,526,683
  127,526,813
  127,528,071
  127,528,367
  127,528,832
  127,529,989
  127,535,774
  127,538,638
  127,538,771
  127,541,205
  127,541,401
  127,541,415
  127,541,595
  127,541,807
  127,541,833
  127,541,976
  127,542,089
  127,542,365
  127,542,366
  127,542,503
  127,542,742
  127,543,025
  127,543,356
  127,543,502
  127,543,768
  127,543,838
  127,544,203
  127,544,265
  127,544,503
  127,544,509
  127,544,526
  127,545,213
  127,545,412
  127,545,807
  127,546,293
  127,546,580
  127,550,145
  127,550,235
  127,550,459
  127,552,707
  127,555,382
  127,557,650
  127,558,571
  127,562,890
  127,563,554
  127,566,126
  127,570,383
  127,573,161
  127,574,218
  127,575,024
  127,575,025
  127,576,451
  127,576,487
  127,576,708
  127,580,111
  127,580,588
  127,580,772
  127,582,129
  127,587,934
  127,593,095
  127,593,235
  127,593,246
  127,593,391
  127,593,987
  127,594,040
  127,594,601
  127,594,766
  127,594,778
  127,594,779
  127,595,032
  127,595,109
  127,595,136
  127,595,393
  127,595,637
  127,596,041
  127,597,428
  127,597,430
  127,598,145
  127,598,436
  127,598,532
  127,598,921
  127,599,386
  127,599,443
  127,601,105
  127,601,384
  127,601,513
  127,601,859
  127,602,212
  127,602,263
  127,602,398
  127,602,582
  127,603,447
  127,604,570
  127,604,759
  127,604,863
  127,605,423
  127,606,022
  127,606,329
  127,606,749
  127,606,761
  127,606,763
  127,606,764
  127,607,804
3
2/-
C/T
A
G/2
T
C
-
G
G
C
C
C/2
T/C
A
3
A/3
A
G
T/-
G
G
A
T
T/G
19
A
-
G/2
G
A
A
C
A
A
-
C
G
A
C
A
A
9
7
2
C
A/-
-
A/-
A
C
C/T
A
A
A
102
3/-
T/G
T
T/A
A
G
4
T
-
C/-
3/-
A/3
G/T
A/-
C/T
C
C
T
A/5
G/2
T
T/A
G/A
55
127/-
G/A
A
T
3/-
T
2
T
C
G
C
C/T
A
T
-
C
T
G/A
A
C
A
T
G
C
G
T/C
T
2
T
G
C/T
C
A
G
A
-
A
-
G
2
-
T
A
C
A
G
-
A
A
A
-
C
A
G
C/T
G/T
2
A
A
-
A
A
A
2/-
A/-
G
C
G
C/-
2
A/3
C
T
T
C
-
C
C/A
A
-
G
G/A
C/G
C
A
T/C
C/T
G
C
A
-
A
G
G
T
C
T
A
T
A
A
-
-
G
A
C
33
-
C/T
-
A/-
T
G
2
G
3
G
A
T
A
A
T
21
G
12/-
A/G
-
C
C
G
-
2
T
A
G
T
A
T
G
T
-
G
T
C
2
T
T
T
G
A/G
C
C
A
A
G
A/G
C
2
G
G/2
C
C
T/C
T
T
G
T