Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 19,677 (bp)   Positions: 82
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
SHR/NHsd (KNAW) 
.027
.001
.002
.001
.006
.0
.001
.0
.0
.001
.0
.998
.006
.075
.334
--
.023
--
--
--
--
.0
--
--
--
--
.005
.194
.092
.007
.061
.798
.005
--
.0
.0
.011
.007
.078
--
.001
.01
--
--
--
--
--
.027
.005
.004
.003
.006
.001
.001
.016
--
.257
--
--
.004
.037
.023
.045
.011
.033
.03
.002
.038
.003
.001
.0
.005
.082
--
.003
.074
.448
.011
.031
.028
.03
.001
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Tdg
Tdg
Tdg
Tdg
Tdg
Tdg
Tdg
Tdg
Tdg
2
C
T
A
C
C
A
T
C
A
T
T
T
G
T
T
A
13
C
A
G
G
G
T
C
6
T
G
A
T
G
T
G
C
C
C
C
G
C
C
G
A
10
9
8
G
A
T
A
G
G
A
5
G
T
A
G
G
C
4
2
T
C
T
C
T
C
A
C
A
G
G
T
G
G
T
A
62
T
A
G
T
  27,313,455
  27,313,459
  27,313,460
  27,313,839
  27,314,026
  27,314,169
  27,314,244
  27,314,255
  27,314,345
  27,314,371
  27,314,385
  27,314,706
  27,314,823
  27,315,103
  27,317,078
  27,317,752
  27,318,017
  27,318,125
  27,318,172
  27,318,189
  27,318,204
  27,319,208
  27,319,582
  27,319,608
  27,319,618
  27,319,623
  27,319,885
  27,320,125
  27,320,286
  27,320,705
  27,321,047
  27,321,066
  27,321,094
  27,321,217
  27,321,534
  27,321,565
  27,321,979
  27,322,087
  27,323,526
  27,323,611
  27,324,317
  27,324,734
  27,324,987
  27,324,988
  27,324,989
  27,325,301
  27,325,578
  27,326,210
  27,326,232
  27,326,593
  27,326,721
  27,326,737
  27,326,789
  27,326,918
  27,326,930
  27,327,033
  27,327,103
  27,327,331
  27,327,433
  27,327,446
  27,327,454
  27,327,456
  27,327,898
  27,327,931
  27,328,024
  27,328,292
  27,328,723
  27,329,424
  27,329,469
  27,329,474
  27,329,478
  27,329,659
  27,330,164
  27,330,478
  27,330,847
  27,331,019
  27,331,442
  27,331,724
  27,332,267
  27,332,268
  27,332,275
  27,332,483
-
4
C
T
T
G
G
C
T
G
A
C
C
2
C
23
G
-
T
G
A
A
A
2
T
-
C
13
5
C
5
T/2
G/4
T
T
A
7
A
T
2
A
2
10/-
9/-
8/-
A
G
C
G
T
A
C
-
A
4
T
T
A
T
-
-
C
T
C
T
C
G
3/4
A
G
5/7
C
G
A
2
C
-
62/-
C
G
A
2