Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 22,577 (bp)   Positions: 89
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
F344/NHsd (KNAW) 
.935
.007
.006
.001
.415
.487
.011
.003
.27
.147
.069
.315
.025
.003
.027
.09
--
--
--
--
.055
.171
.836
--
.084
.825
--
--
--
--
--
--
.077
.008
.002
.001
.001
.0
.0
.0
.253
.007
.004
.0
.025
.001
.004
.002
.023
.056
.089
.327
.004
.002
.0
.0
.007
.005
.0
.004
.016
.001
.001
.03
.043
.004
.002
.001
.0
.048
.04
.027
.001
.002
.067
.056
.992
.995
.06
.533
.021
.046
.002
.255
.008
.082
.015
.0
.956
Syndig1l
Syndig1l
Syndig1l
Syndig1l
Syndig1l
Syndig1l
Syndig1l
Syndig1l
Syndig1l
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
A
T
G
G
14
12
C
A
A
A
G
C
A
C
A
G
C
A
2
C
G
2
T
C
C
C
A
T
C
15
C
C
C
A
2
3
T
T
G
7
A
T
G
T
C
G
C
G
A
C
G
G
C
T
G
G
C
G
A
T
C
G
T
C
5
3
G
G
C
6
C
4
C
A
G
G
C
T
C
T
A
A
G
12
C
A
C
A
G
  117,135,669
  117,138,280
  117,139,029
  117,139,238
  117,139,838
  117,139,840
  117,140,214
  117,140,233
  117,142,207
  117,142,287
  117,142,801
  117,143,354
  117,143,401
  117,143,499
  117,143,520
  117,143,543
  117,143,829
  117,143,834
  117,143,867
  117,143,872
  117,144,021
  117,144,219
  117,144,409
  117,144,575
  117,145,067
  117,145,114
  117,145,396
  117,145,901
  117,145,965
  117,145,967
  117,146,009
  117,146,011
  117,146,073
  117,146,805
  117,148,051
  117,148,058
  117,148,062
  117,148,066
  117,148,151
  117,148,736
  117,148,758
  117,148,913
  117,149,132
  117,149,558
  117,149,672
  117,150,147
  117,150,216
  117,150,242
  117,150,394
  117,150,405
  117,151,023
  117,151,428
  117,151,601
  117,151,689
  117,151,708
  117,151,712
  117,151,800
  117,151,837
  117,151,920
  117,151,934
  117,152,032
  117,152,041
  117,152,046
  117,152,092
  117,152,102
  117,152,119
  117,152,150
  117,152,225
  117,152,240
  117,152,273
  117,152,711
  117,152,744
  117,152,776
  117,152,780
  117,152,931
  117,153,467
  117,153,473
  117,153,476
  117,153,675
  117,153,714
  117,153,830
  117,153,923
  117,154,109
  117,154,534
  117,154,662
  117,155,835
  117,155,865
  117,155,971
  117,156,591
C
C
A
A
14/-
12/-
T
G
G
G
C
5
G
A
T
A
T
C
-
G
A
-
-
CT/3
2
T
2
C
C/-
15/-
A
A
11/15
G
-
-
G
6
9/11
-
-
C
2
A
T
A
T
A
C
T
2
T
G
C
A
C
T
A
G
G
-
T
C
C/-
5/-
-
A
C
A
-
T
-
T
G
A
A
T
C
T
A
C
T
A
-
A
2
T
2
A