Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 127,554 (bp)   Positions: 170
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
WKY/NCrl (KNAW) 
.009
.653
.146
.021
.001
.861
.732
.002
1.0
.063
.463
.377
.078
.202
.168
.0
.0
.003
.002
.095
.001
.0
.001
.0
.0
.001
.0
.939
.008
--
.016
--
.0
.001
.197
--
--
.012
--
--
.022
.047
.03
.053
.251
.003
--
--
--
--
.031
.01
--
.657
--
--
.001
.012
.004
.001
.001
.359
.375
.291
.189
.115
.018
.009
.009
.843
.0
.616
.628
.641
.054
.003
.002
--
.941
.102
.005
.018
.066
.023
.005
.524
.001
.559
.417
.029
.03
--
--
--
--
--
--
.003
.01
.137
--
.004
.577
.0
--
--
--
.669
.647
--
.084
--
.5
.243
.081
.054
--
--
--
.238
.16
.049
.0
.074
--
.469
.209
.029
.359
.542
.608
.684
.646
.481
.382
.033
.008
.003
.002
.006
.012
.012
.002
.001
.002
.001
.002
.003
.044
.007
.021
.083
.055
--
--
.016
.315
.006
.125
--
.451
.144
.031
--
.596
.998
--
.17
.84
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Strbp
Strbp
Strbp
Strbp
Strbp
Strbp
Strbp
Strbp
Strbp
Strbp
Strbp
Strbp
Strbp
Strbp
Strbp
Strbp
Strbp
T
C
C
A
T
C
A
3
A
C
C
A
C
T
2
G
G
G
T
A
G
2
C
G
A
C
A
G
C
C
G
A
G
A
C
2
6
A
C
12
T
A
A
T
A
G
T
13
T
G
A
G
A
C
C
2
T
T
G
C
T
A
A
11
C
T
6
C
G
G
C
3
2
A
C
A
A
A
T
G
A
6
2
C
A
A
C
A
A
C
A
G
C
12
A
T
A
C
G
T
12
G
C
C
A
26
T
C
2
A
A
4
A
2
T
T
A
C
A
T
G
C
T
A
G
G
G
G
T
G
G
G
T
2
3
G
2
G
G
2
C
7
G
4
T
C
2
A
A
A
A
T
G
T
T
C
T
T
A
3
16
T
G
T
8
C
C
A
5
G
  27,059,023
  27,059,829
  27,060,041
  27,061,589
  27,061,926
  27,064,443
  27,064,450
  27,065,413
  27,070,132
  27,071,866
  27,073,020
  27,073,460
  27,074,263
  27,074,456
  27,074,458
  27,074,886
  27,074,942
  27,074,949
  27,075,024
  27,075,036
  27,075,048
  27,075,050
  27,075,054
  27,075,056
  27,075,057
  27,075,060
  27,076,561
  27,076,857
  27,079,284
  27,082,089
  27,082,729
  27,087,481
  27,090,551
  27,090,552
  27,090,586
  27,090,867
  27,091,144
  27,092,186
  27,092,992
  27,093,040
  27,094,420
  27,095,571
  27,095,892
  27,097,901
  27,098,262
  27,099,362
  27,100,648
  27,101,227
  27,101,539
  27,101,642
  27,102,522
  27,104,557
  27,105,119
  27,105,279
  27,108,514
  27,109,590
  27,110,509
  27,110,644
  27,110,645
  27,110,647
  27,110,664
  27,110,684
  27,110,685
  27,110,766
  27,110,788
  27,110,831
  27,111,233
  27,111,797
  27,114,227
  27,116,009
  27,117,077
  27,117,554
  27,117,555
  27,117,556
  27,121,229
  27,121,303
  27,121,904
  27,123,280
  27,124,329
  27,125,159
  27,126,531
  27,127,095
  27,127,099
  27,128,604
  27,131,729
  27,132,585
  27,133,800
  27,133,872
  27,136,136
  27,136,380
  27,136,381
  27,137,792
  27,138,378
  27,138,381
  27,138,641
  27,140,561
  27,140,680
  27,141,021
  27,142,004
  27,142,229
  27,142,739
  27,143,691
  27,144,191
  27,144,813
  27,145,699
  27,146,298
  27,146,641
  27,149,182
  27,154,622
  27,155,861
  27,156,252
  27,157,356
  27,158,412
  27,158,418
  27,158,422
  27,158,426
  27,158,650
  27,159,569
  27,159,570
  27,160,893
  27,161,424
  27,162,197
  27,162,335
  27,162,459
  27,162,683
  27,162,767
  27,162,775
  27,162,782
  27,162,854
  27,162,860
  27,162,863
  27,162,868
  27,162,873
  27,162,878
  27,162,881
  27,162,891
  27,162,895
  27,162,900
  27,162,903
  27,162,908
  27,162,911
  27,162,917
  27,162,929
  27,162,941
  27,162,954
  27,162,966
  27,163,134
  27,163,135
  27,163,190
  27,163,193
  27,164,628
  27,165,171
  27,166,140
  27,167,419
  27,168,096
  27,168,641
  27,168,823
  27,172,068
  27,174,983
  27,175,736
  27,177,339
  27,177,393
  27,177,846
  27,179,056
  27,180,917
  27,181,347
  27,181,386
  27,181,929
  27,184,283
  27,185,742
C
T
C/T
-
G
-
G
3/-
T
C/2
3
C
T
T/2
-
-
A
-
2
2
T
-
T
2
T
-
G
A
2
T
A
G
G/2
-
T
-
-
G
9
-
11
A/T
-
2
-
C
A
-
C
A
C
A
T
4
15
-
A
G
C
A
G
T
T
-
2
C
-
T
A
27
A
3/-
2/-
A/-
3
A/G
A/-
G
C
2
C
6/-
2/-
15
-
T
T
C
-
C/3
A/-
A
A
12/-
G
9
G
2
2
A
-
2
T
T
A/2
26/-
-
T
-
G
G
-
G
-
G
3
2
C/2
A/-
C
A
CA/3
-
G
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
3
-
-
-
-
-
-
A/-
10
55
-
T/21
GA/3
C
C
A
A
C
G
-
-
C
5
T/-
-
2
2
A/-
-
2