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  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 200,132 (bp)   Positions: 467
Conservation 
Genes ( + ) 
Genes ( - ) 
Genes ( - ) 
Rnor 5.0  
LEW/Crl (KNAW) 
--
--
--
.15
.008
.028
.035
.06
.013
.011
.013
.264
--
.007
.012
.043
.122
.136
.024
.025
.064
.099
.034
.015
.181
.286
.015
.091
--
--
.024
.082
.03
.101
.05
.039
.008
.011
.114
.034
.06
.091
.216
.004
.019
.106
.003
.003
.213
.246
.057
.063
.023
.159
.036
.093
.394
.019
.004
.329
.067
--
--
.222
.01
.079
.534
.009
--
--
.003
.002
.008
.048
.0
.055
.0
.099
.0
.151
.052
.133
.038
.05
.058
.053
.041
.026
.014
.005
.032
.236
.054
.007
.038
.0
1.0
.001
.008
.001
.083
.031
.15
.001
.981
.001
.014
.035
.006
.0
.0
.003
.001
.001
.015
.02
.006
.146
.001
--
.471
.007
.067
.006
.302
.958
--
--
.0
.191
.138
.605
.058
.058
--
.192
.0
.991
.001
.21
.028
.002
.0
.001
.0
.0
.874
.713
.135
.995
.173
.0
.05
.015
.936
.016
.969
.643
.564
.002
.0
.011
.124
.161
.004
.013
.065
.008
.48
.029
.042
.01
.008
.017
.003
.001
.001
.001
.0
.001
.0
.006
--
--
.006
.06
.013
.008
.111
.009
--
--
.064
.278
.029
.014
--
--
--
.041
.013
.0
.001
.01
.004
.046
--
--
--
.005
.079
--
--
--
.147
.107
.102
.023
.017
.0
.0
--
--
.017
.0
.997
.197
.066
--
--
.006
.098
.022
.001
.047
.029
.002
1.0
.481
.0
.076
--
.006
.006
.838
.007
.103
.43
.398
.341
.202
.183
.251
.624
.772
.888
.11
.055
.015
.015
.004
.005
.019
.012
.007
.034
.015
.018
.059
.005
.005
.01
.016
.011
.027
.002
--
--
--
.116
.006
.008
.004
.087
.014
.044
.11
.375
.002
.004
.003
.014
.015
.128
.035
.014
.012
.009
.001
.002
.023
.003
--
--
--
--
--
.037
.071
.069
.006
.304
--
--
--
--
--
--
--
--
--
--
--
--
.011
.003
.003
.002
.001
.005
.0
.0
.004
.001
.003
.0
.055
.618
.272
.017
.551
.005
.402
.005
.042
.0
.636
.046
.0
.005
.014
.045
.015
.006
.113
.0
.002
.004
.0
.509
.0
.0
.999
--
--
--
.004
.005
.002
.001
.021
.017
.115
.035
.008
.0
.032
.002
.041
.006
.001
.001
.0
.0
.015
.0
.001
.0
.001
.016
.0
.041
.006
.0
.022
.0
.002
.002
.004
.001
.001
.005
.407
.035
.281
.002
.001
.0
.0
.0
.042
--
.004
.0
.0
.0
.21
.14
--
.065
.137
.846
.008
--
--
.082
.04
.015
.098
.041
.027
.0
.046
--
.035
.027
--
--
--
.0
.299
.0
.026
.004
.923
.96
.014
.0
.007
.004
--
--
--
--
--
--
--
.086
.756
--
--
--
.027
.002
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Notch4
Notch4
Notch4
Notch4
Notch4
Notch4
Notch4
--
--
--
Pbx2
Ager
--
--
--
--
--
--
--
--
Agpat1
Agpat1
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Fkbpl
--
--
--
--
Atf6b
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Stk19-ps
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Rnf5
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Egfl8
Ppt2
Ppt2
Ppt2
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Cyp21a1
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
Stk19
C
A
C
T
G
T
C
A
G
T
T
A
C
C
A
A
C
C
C
A
A
T
C
A
A
C
C
C
G
G
A
C
G
G
G
G
G
T
T
6
T
T
C
A
G
A
7
A
G
C
C
A
C
A
33
G
T
G
C
C
22
T
A
A
A
G
C
A
C
G
C
A
6
T
A
A
13
T
T
G
G
C
T
T
A
A
G
G
G
G
A
G
G
A
C
G
A
A
G
G
A
T
A
C
C
T
G
T
C
C
T
G
A
A
G
A
G
A
T
153
A
C
C
A
T
T
C
C
A
C
C
C
G
G
14
C
C
G
C
C
G
T
A
C
C
C
C
3
A
C
A
A
G
T
3
G
G
2
A
T
T
C
C
2
G
4
127
T
C
T
G
T
T
G
T
G
11
C
C
C
G
C
T
A
6
A
C
A
G
C
T
T
6
3
2
A
2
T
2
C
8
T
C
A
C
C
G
2
T
G
C
T
C
C
G
G
2
C
T
2
A
G
2
A
G
C
G
G
G
G
C
T
C
C
G
T
C
A
A
G
T
T
T
A
C
3
G
A
G
G
C
A
A
G
C
G
G
A
C
A
T
C
2
12
A
C
C
T
A
C
C
G
C
A
G
G
2
G
2
A
C
A
T
C
G
G
C
A
C
T
G
C
A
G
G
A
A
T
G
A
C
C
A
G
T
G
A
G
G
A
T
C
T
G
C
G
G
C
G
T
T
A
T
A
A
A
A
A
T
G
C
C
G
G
A
C
A
C
A
C
G
A
G
T
A
C
C
T
G
C
G
C
A
A
T
G
2
15
T
G
G
T
A
G
C
6
A
C
A
C
G
C
T
C
A
C
C
T
A
2
2
T
T
G
T
C
8
T
C
C
A
T
C
A
C
C
A
A
G
C
C
3
A
C
G
T
T
T
A
A
A
C
A
A
T
A
C
C
A
C
T
G
G
A
T
G
2
19
T
4
G
G
G
G
T
T
T
T
A
C
T
G
C
G
C
C
2
G
G
A
4
A
2
2
A
C
C
C
T
10
8
A
A
2
T
A
G
  6,398,375
  6,398,452
  6,398,464
  6,398,804
  6,399,011
  6,399,536
  6,399,537
  6,399,595
  6,399,801
  6,400,128
  6,400,130
  6,400,236
  6,400,820
  6,401,037
  6,401,158
  6,401,484
  6,401,503
  6,401,515
  6,401,551
  6,401,683
  6,402,080
  6,402,085
  6,402,251
  6,402,265
  6,402,388
  6,402,403
  6,402,424
  6,402,501
  6,403,213
  6,403,224
  6,403,271
  6,403,274
  6,403,469
  6,403,557
  6,403,740
  6,403,903
  6,404,528
  6,404,785
  6,405,010
  6,405,153
  6,405,225
  6,405,252
  6,405,559
  6,405,631
  6,406,016
  6,406,108
  6,406,558
  6,406,564
  6,406,662
  6,406,668
  6,406,830
  6,406,860
  6,406,887
  6,406,933
  6,406,997
  6,407,082
  6,407,286
  6,407,497
  6,407,514
  6,407,674
  6,407,740
  6,407,767
  6,407,895
  6,407,946
  6,408,190
  6,408,244
  6,408,273
  6,408,352
  6,408,418
  6,408,448
  6,408,857
  6,408,882
  6,409,044
  6,409,096
  6,409,291
  6,409,613
  6,409,686
  6,409,728
  6,410,093
  6,410,717
  6,410,861
  6,410,872
  6,410,965
  6,411,020
  6,411,173
  6,411,310
  6,411,385
  6,411,491
  6,411,499
  6,411,557
  6,411,567
  6,411,606
  6,411,863
  6,411,895
  6,411,899
  6,411,962
  6,412,771
  6,413,010
  6,413,033
  6,413,269
  6,413,506
  6,413,537
  6,413,589
  6,413,745
  6,413,928
  6,414,215
  6,414,365
  6,414,374
  6,414,436
  6,414,459
  6,414,491
  6,414,610
  6,414,670
  6,414,788
  6,414,829
  6,414,830
  6,414,882
  6,414,914
  6,414,962
  6,415,711
  6,415,953
  6,416,156
  6,416,663
  6,417,630
  6,417,662
  6,418,068
  6,418,471
  6,418,529
  6,419,008
  6,419,407
  6,419,487
  6,419,916
  6,422,073
  6,422,074
  6,424,733
  6,426,853
  6,428,130
  6,428,482
  6,430,277
  6,432,262
  6,433,638
  6,434,180
  6,434,592
  6,438,071
  6,438,811
  6,439,602
  6,441,172
  6,441,210
  6,441,665
  6,441,714
  6,443,302
  6,443,917
  6,444,715
  6,445,117
  6,445,634
  6,445,769
  6,446,360
  6,446,814
  6,446,815
  6,447,077
  6,447,335
  6,447,622
  6,450,785
  6,451,858
  6,452,106
  6,452,136
  6,452,558
  6,452,947
  6,452,999
  6,453,019
  6,453,179
  6,454,138
  6,454,241
  6,454,394
  6,454,840
  6,455,259
  6,456,356
  6,457,258
  6,457,872
  6,458,132
  6,458,554
  6,459,749
  6,461,949
  6,462,041
  6,462,669
  6,463,152
  6,463,638
  6,463,673
  6,463,815
  6,464,049
  6,465,773
  6,465,783
  6,465,927
  6,471,050
  6,471,608
  6,471,609
  6,477,425
  6,478,858
  6,478,960
  6,479,260
  6,480,065
  6,480,405
  6,480,509
  6,481,066
  6,481,461
  6,481,777
  6,483,971
  6,484,620
  6,485,055
  6,485,686
  6,485,697
  6,487,584
  6,488,229
  6,488,331
  6,489,429
  6,489,439
  6,489,440
  6,489,921
  6,489,922
  6,491,464
  6,491,465
  6,493,019
  6,493,283
  6,493,582
  6,493,593
  6,493,827
  6,493,981
  6,495,391
  6,495,931
  6,495,975
  6,496,892
  6,497,932
  6,498,128
  6,498,559
  6,501,511
  6,504,390
  6,505,632
  6,505,780
  6,506,928
  6,508,744
  6,509,330
  6,509,423
  6,511,764
  6,511,765
  6,511,840
  6,511,907
  6,511,962
  6,512,033
  6,512,035
  6,512,046
  6,512,079
  6,512,107
  6,512,113
  6,512,152
  6,512,161
  6,512,170
  6,512,219
  6,512,334
  6,512,386
  6,512,387
  6,512,460
  6,512,464
  6,512,533
  6,512,536
  6,513,051
  6,513,063
  6,513,074
  6,513,075
  6,513,081
  6,513,194
  6,513,199
  6,513,203
  6,513,229
  6,513,260
  6,513,266
  6,513,350
  6,513,364
  6,513,563
  6,513,585
  6,513,705
  6,513,857
  6,513,970
  6,513,981
  6,514,045
  6,514,123
  6,514,213
  6,514,218
  6,514,243
  6,514,311
  6,514,375
  6,514,376
  6,514,402
  6,514,403
  6,514,414
  6,514,472
  6,514,480
  6,514,506
  6,514,510
  6,514,530
  6,514,579
  6,514,587
  6,514,620
  6,514,642
  6,514,667
  6,514,709
  6,514,711
  6,514,799
  6,514,828
  6,514,835
  6,514,859
  6,514,870
  6,515,049
  6,515,174
  6,515,188
  6,515,219
  6,515,299
  6,515,307
  6,515,316
  6,515,318
  6,515,326
  6,515,329
  6,515,390
  6,515,391
  6,515,423
  6,515,466
  6,515,493
  6,515,540
  6,515,622
  6,515,624
  6,515,644
  6,515,725
  6,516,156
  6,516,160
  6,516,164
  6,516,179
  6,516,239
  6,516,264
  6,516,521
  6,516,742
  6,516,767
  6,516,857
  6,516,983
  6,517,227
  6,517,367
  6,517,457
  6,517,534
  6,517,565
  6,517,979
  6,518,418
  6,518,616
  6,518,745
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  6,518,826
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  6,527,947
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  6,588,608
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  6,588,630
  6,588,634
  6,588,649
  6,589,133
  6,589,330
  6,590,295
  6,590,417
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T
G
5
C
T
A
T
G
T
A
C
G
T
T
3
7
T
T
T
G
G
3
T
G
G
T
G
T
A
A
G
T
A
A
A
A
C
C
C
-
C
C
G
G
C
C
-
9
A
T
G
G
T
G
-
A
C
A
T
G
-
A
C
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3
A
T
2
C/T
2
T
G
-
C
G
G
-
A
C
A
A
50
C
C
G
-
A
A
C
C
G
A
-
G
T
A
G
G
A
A
2
C
11
C/3
T
C
5
C
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C
T
A
G
A
T
G
-
G
T
2
G
7
5
T
6
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-
26
?
2
16
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2
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T
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A
C
C
T
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CT/3
-
G
A
G
G
C
C
-
A
A
2/-
A/-
11
14
4
8
-
A
-
-
C
A
A
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A
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45
-
T
T
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C
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G
-
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T
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5
A
4
A
-
3/-
2/-
-
2/-
T/97
-
C/2
-
C
T
-
3/CT
CA/3
A
2/-
C
2
T
2
C/2
C/2
A
3/GA
2/-
C/2
T/-
2/-
-
3/7
2/-
G
A
T
3
A
A
A
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C
T
T
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-
3
G/-
C
5
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C
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4
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9
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C
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-
G
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9
2/-
G
T
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C
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T
C
A
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G
A
2
G
G
G
A
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14
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3
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97
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5
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2
103
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2
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20
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T
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-
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4
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3
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5
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5
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3
A/2
C
C
T
T
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-
2
A
2/-
-
C
-
T
A
A
A
-
-
A
A
A/-
13
53
-
2
3
G
T
2/-
G/-
G/31
A/73
4/-
A/5
2/-
2/-
A/3
C/3
C/5
T
C
10/-
8/-
T
-
-
G
G
2