Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 33,182 (bp)   Positions: 69
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
Crl:SD (UDEL) 
.001
.014
.004
.001
.003
.001
.0
.304
.039
.004
.063
.0
.007
.054
.001
--
.096
.542
.013
.014
.005
.001
.001
.668
.984
.806
.001
.103
.252
.1
.491
.009
.007
.739
.052
.068
.026
.01
.0
.006
.0
.0
.002
.001
.007
.849
.978
--
.016
.001
.001
--
.001
.064
.0
.026
.153
.174
.021
--
--
.0
.003
.0
.0
.003
.004
.198
.003
Slc18a1
Slc18a1
Slc18a1
Slc18a1
Slc18a1
Slc18a1
Slc18a1
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
A
A
T
A
A
A
C
A
T
T
A
A
A
C
A
2
A
A
C
C
C
C
C
G
G
C
G
A
A
A
C
G
C
A
T
G
T
T
C
G
T
A
A
A
C
C
T
2
G
C
C
C
A
C
C
A
G
T
C
G
C
G
G
T
G
12
G
A
C
  22,256,668
  22,257,357
  22,258,314
  22,258,530
  22,259,546
  22,260,149
  22,260,223
  22,260,540
  22,260,723
  22,261,053
  22,261,658
  22,262,249
  22,262,377
  22,262,425
  22,263,331
  22,263,942
  22,264,629
  22,264,996
  22,265,182
  22,265,288
  22,268,149
  22,268,782
  22,268,802
  22,268,873
  22,268,989
  22,269,412
  22,270,398
  22,270,463
  22,271,311
  22,271,329
  22,271,389
  22,273,060
  22,273,061
  22,273,573
  22,273,809
  22,273,957
  22,274,054
  22,274,152
  22,274,451
  22,274,820
  22,274,975
  22,275,331
  22,275,420
  22,275,610
  22,275,652
  22,275,685
  22,275,833
  22,276,567
  22,276,696
  22,277,050
  22,277,097
  22,277,103
  22,277,780
  22,279,424
  22,280,411
  22,281,482
  22,281,558
  22,282,420
  22,282,808
  22,283,484
  22,283,506
  22,283,772
  22,283,817
  22,284,340
  22,286,326
  22,286,449
  22,289,080
  22,289,099
  22,289,165
C
-
A
G
G
G
G
G
C
C
G
2
G
T
G
-
G
T
T
T
A
T
T
A
A
2
A
G
T
G
A
A
A
G
C
A
C
A
-
A
C
G
C
G
T
T
A
-
A
T
2
T
T
T
T
G
2
C
T
T
T
C
A
C
A
-
T
C
A