Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 211,425 (bp)   Positions: 98
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
MNS/Gib (KNAW) 
.871
.99
.985
.272
.001
.002
.211
.002
.005
.004
--
.01
--
.081
.081
--
--
.046
--
.111
--
.001
--
--
.002
.012
.029
.003
.012
.268
.208
.177
.073
--
.575
--
--
--
.135
.737
--
.1
.015
.023
.092
--
.0
--
.014
.037
.098
.046
.118
.003
.001
.001
.11
.008
1.0
--
.049
.027
.539
.542
.003
--
--
--
--
--
.187
.067
.069
--
.329
.047
.009
.022
.001
.085
.078
.002
.004
.035
--
.022
.099
.014
.003
.016
.0
.001
.002
.003
1.0
1.0
.002
.997
Sik3
Sik3
Sik3
Sik3
Sik3
Sik3
Sik3
Sik3
Sik3
Sik3
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
A
2
A
6
A
C
C
8
6
5
C
A
A
G
T
2
2
C
T
6
G
C
2
T
T
8
4
6
4
3
4
4
C
4
2
G
4
37
26
2
C
2
6
4
C
T
C
C
2
C
T
T
2
A
2
C
G
4
4
4
T
T
4
2
C
T
A
T
G
A
2
8
6
T
4
4
A
C
T
G
G
A
T
A
G
C
6
C
G
25
G
T
T
A
A
T
C
A
  48,935,041
  48,935,078
  48,935,079
  48,938,534
  48,938,734
  48,938,941
  48,940,152
  48,941,014
  48,941,186
  48,941,187
  48,943,673
  48,945,867
  48,946,987
  48,947,484
  48,949,353
  48,949,434
  48,949,476
  48,951,800
  48,952,186
  48,956,565
  48,963,087
  48,965,447
  48,966,680
  48,966,681
  48,967,002
  48,971,510
  48,971,514
  48,973,101
  48,973,103
  48,974,779
  48,977,249
  48,977,253
  48,978,139
  48,979,766
  48,981,159
  48,984,669
  48,985,981
  48,985,988
  48,988,021
  48,988,045
  48,989,344
  48,992,856
  48,993,694
  48,993,696
  48,999,023
  48,999,063
  49,000,288
  49,010,909
  49,011,063
  49,011,161
  49,014,967
  49,020,074
  49,023,281
  49,024,405
  49,028,166
  49,028,167
  49,030,552
  49,034,400
  49,040,366
  49,053,877
  49,062,246
  49,062,352
  49,069,619
  49,069,621
  49,077,612
  49,080,496
  49,080,498
  49,080,514
  49,080,516
  49,085,597
  49,091,582
  49,092,648
  49,092,650
  49,100,112
  49,109,788
  49,113,396
  49,119,808
  49,120,485
  49,121,402
  49,122,230
  49,122,235
  49,131,013
  49,131,232
  49,134,904
  49,136,836
  49,138,411
  49,139,073
  49,139,686
  49,139,768
  49,139,788
  49,141,256
  49,141,300
  49,142,085
  49,142,228
  49,142,346
  49,145,313
  49,145,607
  49,146,203
-
-
8
6/-
G
C/-
-
-
6/-
5/-
C/7
C
5
G/A
5
2/-
2/-
C/T
C
-
2
3
2/-
T/-
C
8/-
4/-
6/-
4/-
-
4/-
4/-
C/2
4/-
2/-
-
4/-
37/-
26/-
2/-
-
2/-
6/-
-
2
T/-
55
2
2/-
-
A
5
2/-
A/2
2/-
C/-
5
4/-
-
4/-
C
-
-
2/-
T
5
8
5
16
A/-
-
8/-
6/-
T/2
-
-
G
T
T/-
G/-
G/-
3
C
G
2
G
-
T
A
-
A
G
C
G
T
-
T
7