Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 20,008 (bp)   Positions: 80
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
COP/CrCrl (MCW & UW) 
.994
.056
--
--
.001
.665
.0
.0
.0
.52
.21
.02
.001
.014
.201
.071
.015
.117
.0
.283
.173
.101
--
.001
.001
.001
.0
.012
.016
.424
.156
.084
--
.994
.979
.989
.951
.991
.998
.995
.987
.021
.21
.017
.025
.001
.0
--
--
--
--
--
--
--
--
--
--
--
.026
--
--
--
.042
.004
.034
--
--
.018
.001
.009
.612
.02
.0
.005
.0
.59
.655
.255
.134
.986
Septin3
Septin3
Septin3
Septin3
Septin3
Septin3
Septin3
Septin3
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
A
G
C
4
T
A
T
C
A
A
C
T
T
T
G
3
T
C
G
5
T
T
A
A
A
T
G
11
G
A
T
A
G
G
T
T
T
T
2
G
C
T
C
A
T
T
A
T
G
C
A
G
T
C
C
A
A
C
G
G
G
G
C
T
A
T
C
4
T
T
T
C
A
A
C
T
G
3
A
G
  123,492,004
  123,492,281
  123,492,556
  123,492,810
  123,493,663
  123,493,987
  123,494,616
  123,496,186
  123,496,194
  123,496,992
  123,497,045
  123,497,091
  123,497,135
  123,497,448
  123,497,628
  123,497,927
  123,497,967
  123,498,212
  123,499,485
  123,499,845
  123,500,234
  123,501,023
  123,501,518
  123,501,751
  123,501,784
  123,502,392
  123,502,505
  123,502,724
  123,502,899
  123,503,738
  123,503,884
  123,504,305
  123,504,377
  123,504,578
  123,504,580
  123,504,582
  123,504,588
  123,504,617
  123,504,639
  123,504,759
  123,504,900
  123,505,292
  123,505,373
  123,505,729
  123,505,746
  123,506,159
  123,506,187
  123,506,199
  123,506,227
  123,506,229
  123,506,231
  123,506,283
  123,506,332
  123,506,351
  123,506,356
  123,506,357
  123,506,365
  123,506,370
  123,506,485
  123,506,621
  123,507,027
  123,507,334
  123,507,408
  123,507,550
  123,507,759
  123,507,836
  123,507,877
  123,508,115
  123,508,166
  123,508,985
  123,509,011
  123,509,030
  123,510,096
  123,510,113
  123,510,426
  123,510,714
  123,510,736
  123,510,738
  123,511,084
  123,511,131
G
A
5
-
C
G
A
A
G
G
T
C
C
C
2
-
2
T
A
-
C
G
T
G
-
C
T
-
A
-
C
5
C
G/C
T/C
T/C
T/C
?
2/-
T
C/G
C
A
G
C
2
C
-
A
G
G
C
G
2
T
G
G
T
A
T
C
A
A
C
G
C
-
-
G
C
C
G
G
G
T
G
G/-
3/-
G
C