Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 32,582 (bp)   Positions: 75
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
SR/JrHsd (KNAW) 
.018
.01
.005
.0
.0
.065
.005
.08
.044
.174
.0
.0
.0
.63
.059
.098
.046
.012
.002
.003
.0
.01
.002
.358
.017
.003
.033
.083
.106
.02
.043
.32
.001
.004
.003
.158
.126
.029
.023
.092
.002
.988
.001
.001
.001
.003
.002
.007
.066
.003
.002
.002
.001
.001
.058
.002
.0
.0
.006
.322
--
--
.976
.004
.007
.003
.0
.989
.025
.004
.006
.139
.001
.802
.013
Sdc3
Sdc3
Sdc3
Sdc3
Sdc3
Sdc3
Sdc3
Sdc3
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
G
3
T
C
T
A
T
G
G
A
A
2
C
C
T
G
G
A
T
G
C
3
9
A
G
A
T
9
7
C
3
C
A
G
C
C
5
C
C
G
C
8
C
A
A
G
A
T
G
G
A
T
T
T
G
T
A
C
4
A
G
A
T
A
G
T
C
T
G
C
A
A
G
A
G
  152,630,831
  152,631,232
  152,631,237
  152,634,033
  152,637,145
  152,637,617
  152,639,353
  152,641,663
  152,641,703
  152,645,024
  152,645,313
  152,645,315
  152,646,156
  152,646,394
  152,646,511
  152,646,858
  152,646,860
  152,646,884
  152,647,074
  152,647,424
  152,647,479
  152,647,565
  152,647,601
  152,647,872
  152,647,945
  152,647,966
  152,648,097
  152,648,124
  152,648,126
  152,648,332
  152,648,645
  152,648,679
  152,648,907
  152,648,909
  152,648,911
  152,648,916
  152,648,920
  152,648,927
  152,648,929
  152,649,343
  152,649,362
  152,649,837
  152,650,240
  152,650,283
  152,650,357
  152,650,627
  152,650,915
  152,651,093
  152,651,175
  152,651,223
  152,651,226
  152,651,294
  152,651,338
  152,651,360
  152,651,412
  152,651,425
  152,652,194
  152,652,371
  152,652,839
  152,653,321
  152,654,360
  152,654,367
  152,656,241
  152,656,364
  152,656,365
  152,656,587
  152,656,841
  152,657,114
  152,657,152
  152,657,627
  152,657,907
  152,658,002
  152,659,917
  152,660,337
  152,660,517
A
-
4
2
2
2
C
A
T
-
-
-
G
T
G
A
A
G
C
C
A
-
-
15
A
11
T/C
9/-
7/-
3
-
T
G
-
T
6
-
T
T
A
T
-
A
G
G
A
G
C
A
C
G
C
-
C
2
C
C
T
-
G
A
G
C
G
A
A
G
C
A
T
G
G
C
G
2