Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 69,783 (bp)   Positions: 111
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
ACI/EurMcwi (KNAW) 
.987
.995
.006
.017
.927
.002
.001
.156
.002
.568
.067
--
--
--
--
.041
.011
.165
.019
.19
.002
.002
.007
.077
.765
.021
.004
.094
.004
.053
.0
.001
.0
.215
.808
--
--
.004
.591
.398
.243
.226
.268
.255
.006
.033
.032
--
--
--
--
--
--
--
--
--
--
--
--
--
.0
.384
.001
.005
.112
.136
.165
.053
.017
.025
.005
.002
.005
.003
.0
.077
.003
.015
.003
.0
.001
.013
.01
.004
.002
.001
.0
.001
.021
.002
.0
.007
.032
.02
.004
.001
.169
.102
--
--
.011
.009
.024
.07
.32
.08
.001
.016
.409
.321
.008
Rasef
Rasef
Rasef
Rasef
Rasef
Rasef
Rasef
Rasef
Rasef
Rasef
Rasef
Rasef
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
T
C
T
G
G
T
A
A
2
A
G
3
C
C
C
A
G
A
T
G
G
G
A
C
T
G
A
A
A
A
C
24
C
T
2
A
T
C
C
A
A
A
C
C
T
T
C
16
2
A
A
2
T
2
C
A
T
C
T
T
T
A
C
C
T
C
C
G
C
G
8
A
4
T
G
2
C
A
3
C
T
G
G
C
G
C
G
T
A
A
T
T
G
T
4
G
A
C
G
C
G
T
T
T
A
T
C
4
G
T
A
  94,480,428
  94,480,510
  94,480,611
  94,481,524
  94,482,126
  94,482,235
  94,482,366
  94,482,516
  94,483,360
  94,484,780
  94,484,827
  94,485,510
  94,485,753
  94,485,811
  94,485,908
  94,487,465
  94,488,342
  94,488,921
  94,489,128
  94,489,702
  94,491,294
  94,491,295
  94,492,769
  94,496,128
  94,496,540
  94,497,144
  94,497,937
  94,498,460
  94,498,973
  94,501,306
  94,501,476
  94,501,779
  94,502,721
  94,503,092
  94,504,380
  94,505,957
  94,506,072
  94,506,806
  94,507,798
  94,508,395
  94,508,494
  94,508,927
  94,509,178
  94,509,179
  94,509,830
  94,510,807
  94,511,413
  94,511,795
  94,512,136
  94,512,326
  94,512,382
  94,512,383
  94,512,861
  94,513,096
  94,514,189
  94,514,942
  94,514,964
  94,515,562
  94,515,825
  94,515,826
  94,517,261
  94,517,601
  94,518,233
  94,518,672
  94,520,582
  94,521,230
  94,521,640
  94,521,854
  94,522,498
  94,523,779
  94,524,081
  94,525,404
  94,525,700
  94,525,735
  94,526,129
  94,526,199
  94,526,225
  94,527,348
  94,529,553
  94,529,880
  94,531,999
  94,532,085
  94,532,201
  94,535,053
  94,535,564
  94,535,845
  94,535,846
  94,535,847
  94,537,435
  94,537,800
  94,538,487
  94,538,824
  94,540,545
  94,540,659
  94,541,605
  94,542,069
  94,543,327
  94,543,449
  94,544,141
  94,545,153
  94,546,710
  94,547,593
  94,548,287
  94,548,451
  94,548,525
  94,548,586
  94,548,657
  94,548,845
  94,549,300
  94,549,365
  94,549,662
A
G
G
T
A
2
AT/3
3
-
4
A
-
T
T
T
G
A
G
G
A
C
A
G
T
A
A
2
-
T
4
G
-
G
9
-
G
5
T
3
-
T
T
T
T
C
C
4
-
-
G
A/5
2/-
G
-
A
2
C
C/2
G
G
C
G
3
A
-
T
3
13
G
A
-
A/C
-
7
2
-
3
G
3/-
T
A
A
A
3
A
2
2
A
G
2
G
C
21
9
-
-
C
T
A
2
G/5
G
-
G
G
G
2
-
C
C
G