Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 21,730 (bp)   Positions: 142
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
FHL/EurMcwi (KNAW) 
.002
.984
.0
.0
.0
.0
.063
.199
.002
.112
.06
.106
.052
.005
.001
--
--
--
--
--
--
--
--
--
--
.016
.001
.002
.003
.001
.012
.008
.035
1.0
.0
.005
.005
.003
.0
.001
.001
.001
.003
.002
.0
.0
.0
.0
.013
.004
.011
.026
.0
.0
.005
.006
--
.035
.087
.1
.102
.1
.09
.089
.073
.054
.044
.013
.009
.01
.062
.107
.108
.119
.228
.313
.372
.377
.341
.36
.345
.315
.3
.052
.183
.028
.705
.115
.108
.016
.007
.003
.002
.009
.044
.006
.047
.044
.001
.015
.096
.002
.01
.04
.078
.072
.027
.232
.714
.106
.346
.084
.376
.078
.003
.395
.576
.008
.289
.236
.012
.129
.12
.021
.083
.17
.059
--
--
.029
--
--
--
--
.02
.053
.128
.052
.329
.001
.122
.0
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Rab8a
Rab8a
Rab8a
Rab8a
Rab8a
Rab8a
Rab8a
Rab8a
Rab8a
Rab8a
Rab8a
Rab8a
Rab8a
Rab8a
Rab8a
G
T
C
A
A
G
G
A
G
G
G
A
T
G
C
G
T
T
C
C
C
12
A
A
7
T
A
G
C
A
A
T
T
C
A
A
G
A
T
G
C
A
C
G
T
C
T
A
G
A
T
G
G
A
C
A
C
4
A
A
A
A
4
2
G
A
T
4
A
G
9
C
C
G
A
5
T
6
C
4
A
A
C
C
A
A
C
T
G
T
A
C
C
6
C
G
A
C
A
T
T
G
C
T
C
C
A
G
G
C
C
A
A
T
A
T
T
10
T
G
C
C
C
G
A
A
A
C
C
A
2
C
G
C
T
A
T
T
A
G
G
4
  19,213,567
  19,214,571
  19,214,756
  19,214,887
  19,214,896
  19,215,078
  19,215,170
  19,215,271
  19,215,536
  19,215,586
  19,215,649
  19,215,668
  19,215,750
  19,215,810
  19,215,814
  19,215,818
  19,215,890
  19,215,903
  19,215,905
  19,215,924
  19,216,381
  19,216,467
  19,217,794
  19,217,824
  19,217,935
  19,218,020
  19,218,424
  19,218,425
  19,218,557
  19,219,076
  19,219,199
  19,219,504
  19,219,507
  19,219,606
  19,219,943
  19,219,976
  19,219,986
  19,219,987
  19,220,008
  19,220,032
  19,220,035
  19,220,204
  19,220,354
  19,220,399
  19,220,521
  19,220,587
  19,220,616
  19,220,625
  19,221,079
  19,221,173
  19,221,211
  19,221,394
  19,221,530
  19,221,566
  19,221,860
  19,222,248
  19,222,486
  19,222,491
  19,222,496
  19,222,499
  19,222,502
  19,222,503
  19,222,507
  19,222,512
  19,222,515
  19,222,517
  19,222,521
  19,222,525
  19,222,531
  19,222,532
  19,222,539
  19,222,551
  19,222,552
  19,222,554
  19,222,558
  19,222,562
  19,222,568
  19,222,570
  19,222,577
  19,222,582
  19,222,586
  19,222,589
  19,222,590
  19,222,664
  19,222,777
  19,222,798
  19,222,988
  19,223,111
  19,223,112
  19,223,127
  19,223,129
  19,223,154
  19,223,164
  19,223,176
  19,223,241
  19,223,285
  19,223,328
  19,223,329
  19,223,354
  19,223,363
  19,223,384
  19,223,574
  19,223,837
  19,224,032
  19,224,052
  19,224,056
  19,224,337
  19,224,657
  19,224,706
  19,225,067
  19,225,144
  19,225,600
  19,225,855
  19,225,872
  19,225,953
  19,226,764
  19,227,212
  19,227,602
  19,228,463
  19,228,493
  19,228,696
  19,229,485
  19,229,726
  19,229,991
  19,230,754
  19,230,883
  19,230,891
  19,231,076
  19,231,080
  19,231,509
  19,232,101
  19,232,224
  19,232,343
  19,232,434
  19,232,671
  19,232,682
  19,233,014
  19,233,331
  19,233,416
  19,233,563
  19,233,875
  19,234,147
A
C
T
G
C
A
C
G
-
T
A
G
C
A
G
A
C
C
T
T
G
-
61
16
-
A
G
C
T
G
G
C
G
T
G
G
T
T
C
A
G
G
4
T
C
T
C
G
A
G
C
A
5/3
G
T
G
5
-
T
2
G
28
-
-
C
-
-
-
G
T
-
A
A
2
-
-
C
-
2
-
G
T
G
T
G
C
T
C
A
C
G
T
T
-
T
T
G
8
G
-
C
A
T
A
2
A
G
T
A
T
G
G
G
C
G
C
A
-
A
3
2
T
C/3
A
2
G
C
3
C/3
C
-
A
C
T
C
G
C
3
G
A
A
-