Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 36,439 (bp)   Positions: 83
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
LE/Stm (Illumina) (KNAW) 
--
--
.044
.003
.0
.061
.038
.008
.002
.007
.003
.02
.621
.001
.002
.698
.021
.058
.003
.001
.032
.998
.005
.002
.0
.002
.006
.0
.043
.156
.0
.081
.0
.0
.0
.149
.166
.029
.0
.168
.024
.069
--
.001
--
--
--
.019
.012
.018
.748
.023
.298
.07
.003
.0
.017
--
.049
.002
.002
.038
.116
.238
.007
.001
.0
.0
--
--
--
--
.008
.15
--
--
--
.004
.106
.0
.0
.004
.014
Prrx2
Prrx2
Prrx2
Prrx2
Prrx2
Prrx2
Prrx2
Prrx2
Prrx2
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
G
4
A
A
T
A
A
C
T
G
A
G
C
A
G
A
T
G
A
A
T
A
A
G
A
T
T
G
C
T
T
G
A
3
2
T
G
7
T
25
G
G
T
A
T
10
8
T
A
T
T
A
G
A
T
C
T
C
24
C
T
A
T
A
T
G
T
A
14
G
G
C
C
G
A
C
4
A
C
G
G
T
G
  15,042,270
  15,042,481
  15,042,571
  15,043,428
  15,043,446
  15,043,470
  15,043,557
  15,043,730
  15,043,838
  15,044,239
  15,044,813
  15,045,209
  15,045,916
  15,046,272
  15,046,287
  15,046,598
  15,046,644
  15,046,690
  15,046,923
  15,047,119
  15,047,135
  15,047,289
  15,047,683
  15,047,830
  15,048,220
  15,048,305
  15,048,441
  15,048,569
  15,049,465
  15,049,819
  15,053,444
  15,053,662
  15,054,020
  15,054,201
  15,054,202
  15,054,521
  15,054,625
  15,056,541
  15,057,684
  15,057,893
  15,057,968
  15,057,983
  15,059,045
  15,059,280
  15,059,581
  15,059,710
  15,059,776
  15,060,271
  15,060,274
  15,061,126
  15,061,261
  15,061,354
  15,062,907
  15,065,359
  15,065,958
  15,066,659
  15,066,930
  15,067,410
  15,068,067
  15,068,092
  15,068,093
  15,068,275
  15,068,414
  15,068,529
  15,068,835
  15,069,388
  15,070,013
  15,070,519
  15,071,559
  15,071,810
  15,071,835
  15,071,873
  15,072,316
  15,072,348
  15,072,978
  15,072,990
  15,073,225
  15,074,089
  15,074,129
  15,074,691
  15,075,300
  15,075,838
  15,076,185
3
-
G
G
G
T
C
T
C
3
T
A
T
G
A
G
A
T
G
G
G
T
T
A
G
C
C
A
T
3
7/4
2
G
3/-
2/-
A
C
-
3/TG
-
A
A
2
-
T/3
-
-
A
G
C
G
G
A
-
A
T
C
G
-
A
G
C
C
C
10
A
C
G
-
T
T
T
2
A
C
A
-
5
G
A
9
4
21