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  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 193,832 (bp)   Positions: 376
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
Crl:SD (UDEL) 
.079
.021
.532
.701
.176
.001
.129
.003
.002
.086
.034
.037
.133
.245
.704
.015
.088
.016
.004
.019
.01
.039
.0
.048
.358
.009
.263
.003
.017
.003
.002
.014
.001
.022
.613
.021
.011
.001
.002
.202
.004
.01
.053
.002
.113
.005
.001
.004
.015
.005
.0
.002
.001
.003
.06
.33
.04
.013
.004
.076
.044
.001
.001
.041
.967
.077
.001
.927
.005
.1
.002
.034
.001
.002
.051
.274
.001
.004
.038
.001
.313
.01
.084
.222
.363
.288
.022
.005
.009
.011
.105
.294
.303
.011
.014
.018
.001
.193
.0
.056
.017
.0
.096
.0
.001
.0
.0
.0
.001
.0
.258
.0
.001
.006
.017
.011
.0
.0
.005
.16
.002
.0
.049
.005
.025
.002
.061
.004
.002
.01
.003
.032
.01
.001
.029
.008
.338
.007
.001
.001
.002
.001
.0
.001
.0
.012
.0
.008
.002
.063
--
.348
.013
.522
.006
.021
.001
.057
.04
.306
.314
.028
.018
.005
.012
.012
.721
.168
.0
.016
.0
.041
.019
.004
.001
.004
.002
.004
.0
.001
.053
--
.022
.017
.007
.002
.001
.008
.001
.0
.004
.02
.001
.178
.037
.0
.333
.171
.026
.042
.078
.081
.001
.001
.0
.396
.0
.003
.0
.001
.008
.052
.009
.012
.141
.0
.081
.067
--
--
--
--
--
--
.499
.132
.197
.002
.069
.002
.01
.003
.0
.006
.056
.001
.345
.006
.31
.01
.0
.003
.994
.985
.858
.295
.048
.002
.022
.071
.002
.009
.003
.004
.007
.033
.083
.002
.014
.07
.002
.013
.005
.006
.048
--
--
--
--
--
--
--
--
--
--
--
--
.001
.037
.003
.009
.015
.267
.0
.108
.008
--
.024
.06
.001
--
--
--
.002
.0
.001
.002
.002
.218
.006
.037
.028
.028
.0
.005
.007
.0
--
--
.367
.149
.001
.0
.001
.002
.007
.003
.0
.122
--
--
--
--
--
.007
.11
.049
.041
.045
.045
.0
.042
.002
.177
.109
.473
.01
.006
.002
.841
.764
.0
.013
.021
.0
.017
.001
.054
.049
.001
.002
.029
.003
.03
.0
.001
.0
.0
.691
.0
.0
.002
.0
.035
.295
.002
.0
.005
.0
.081
.0
.001
.001
.024
.002
.011
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
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--
--
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--
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--
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--
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--
--
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--
--
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--
--
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--
--
--
--
--
--
--
--
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--
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--
--
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--
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--
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--
--
--
--
--
--
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--
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--
--
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--
--
--
--
--
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--
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--
--
--
--
--
--
--
--
--
--
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--
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--
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--
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--
--
--
--
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--
--
--
--
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--
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--
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--
--
--
--
--
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--
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--
--
--
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--
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--
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--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
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--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
Prlr
A
T
T
G
T
A
G
A
T
G
A
A
T
A
G
T
A
A
C
G
C
A
G
C
T
C
G
C
A
A
T
G
C
C
C
C
C
C
A
G
C
C
A
G
A
C
T
A
A
A
T
G
T
G
A
C
G
C
G
C
C
T
C
G
C
C
C
G
T
G
C
A
C
G
A
A
C
G
G
C
C
A
T
C
A
C
T
C
C
T
T
C
T
C
A
2
C
T
A
T
C
G
G
A
A
C
C
A
G
G
C
A
G
2
A
T
C
T
A
T
C
T
G
T
C
C
C
T
T
C
A
C
A
G
4
T
A
G
G
G
C
C
C
C
A
C
C
C
C
T
A
A
A
G
C
G
C
T
G
T
A
A
G
C
A
A
2
G
A
T
A
C
G
T
A
G
A
C
C
T
G
A
C
C
A
T
A
A
T
A
C
C
A
G
A
G
C
T
T
A
A
T
T
A
A
A
T
G
G
C
G
T
A
A
C
G
T
A
G
T
C
A
T
T
T
T
T
A
C
G
C
G
G
3
T
A
T
G
C
8
G
G
T
A
T
A
T
C
A
C
T
2
T
T
A
T
T
G
A
T
C
C
T
T
G
3
T
G
G
A
A
A
A
G
G
G
A
C
T
C
G
C
G
C
G
C
G
A
T
G
T
A
A
G
G
T
T
T
C
A
C
G
C
T
C
T
T
G
G
T
A
G
C
G
T
G
G
A
C
T
T
T
T
C
C
A
A
4
G
A
A
T
A
G
G
A
G
G
A
G
C
T
G
T
T
A
G
C
T
G
C
G
A
T
C
G
T
A
T
A
A
C
C
T
G
A
C
G
T
A
C
C
T
A
12
C
  84,360,993
  84,361,070
  84,361,205
  84,361,338
  84,361,525
  84,361,680
  84,361,923
  84,362,215
  84,362,442
  84,362,754
  84,362,903
  84,362,922
  84,363,101
  84,363,156
  84,363,315
  84,363,368
  84,363,466
  84,364,042
  84,364,070
  84,364,093
  84,364,524
  84,365,497
  84,365,924
  84,366,151
  84,367,621
  84,368,480
  84,368,997
  84,370,246
  84,370,720
  84,370,746
  84,370,774
  84,370,801
  84,370,977
  84,371,055
  84,373,403
  84,373,843
  84,373,849
  84,373,850
  84,373,854
  84,374,364
  84,375,088
  84,376,604
  84,376,922
  84,377,240
  84,377,717
  84,379,008
  84,379,375
  84,379,519
  84,381,056
  84,381,940
  84,382,255
  84,382,441
  84,382,938
  84,383,625
  84,388,204
  84,393,348
  84,398,899
  84,399,306
  84,399,844
  84,400,043
  84,400,075
  84,400,098
  84,400,099
  84,400,119
  84,400,128
  84,400,365
  84,400,383
  84,400,657
  84,401,749
  84,401,785
  84,402,003
  84,403,377
  84,403,771
  84,404,605
  84,404,635
  84,405,799
  84,406,238
  84,406,913
  84,408,418
  84,408,755
  84,409,740
  84,409,775
  84,410,425
  84,410,447
  84,410,970
  84,411,184
  84,411,284
  84,411,505
  84,411,511
  84,411,512
  84,411,767
  84,411,821
  84,411,824
  84,412,152
  84,412,153
  84,412,358
  84,412,372
  84,412,422
  84,412,498
  84,412,514
  84,412,604
  84,412,651
  84,412,850
  84,412,892
  84,412,893
  84,412,969
  84,413,161
  84,413,162
  84,413,224
  84,413,295
  84,413,420
  84,413,446
  84,413,484
  84,413,851
  84,413,992
  84,414,107
  84,414,418
  84,414,448
  84,414,504
  84,414,521
  84,414,808
  84,414,861
  84,414,970
  84,415,125
  84,415,149
  84,415,156
  84,415,213
  84,415,253
  84,415,432
  84,415,456
  84,415,919
  84,416,001
  84,416,031
  84,416,043
  84,416,183
  84,416,218
  84,416,271
  84,416,395
  84,416,437
  84,416,554
  84,416,727
  84,416,776
  84,416,804
  84,417,061
  84,417,230
  84,419,567
  84,422,726
  84,423,075
  84,423,797
  84,426,646
  84,426,816
  84,426,964
  84,427,692
  84,427,967
  84,428,559
  84,428,958
  84,429,639
  84,431,449
  84,431,578
  84,431,920
  84,433,382
  84,433,487
  84,433,488
  84,433,494
  84,433,501
  84,433,603
  84,435,809
  84,436,009
  84,436,538
  84,442,478
  84,443,569
  84,444,230
  84,444,231
  84,447,914
  84,448,138
  84,448,890
  84,451,839
  84,453,322
  84,453,341
  84,456,610
  84,457,813
  84,459,687
  84,460,380
  84,460,382
  84,460,604
  84,460,620
  84,460,815
  84,460,942
  84,461,567
  84,461,893
  84,461,933
  84,462,284
  84,462,344
  84,462,419
  84,462,607
  84,462,787
  84,462,890
  84,462,896
  84,463,372
  84,463,580
  84,463,904
  84,463,999
  84,464,268
  84,464,362
  84,464,400
  84,464,428
  84,464,615
  84,464,626
  84,464,677
  84,464,768
  84,464,809
  84,465,097
  84,466,265
  84,466,726
  84,467,505
  84,468,043
  84,468,302
  84,469,056
  84,469,240
  84,469,244
  84,469,305
  84,469,319
  84,469,329
  84,469,341
  84,469,849
  84,469,901
  84,470,229
  84,470,677
  84,471,395
  84,472,482
  84,472,519
  84,473,662
  84,473,728
  84,473,930
  84,473,933
  84,475,581
  84,475,621
  84,476,616
  84,478,115
  84,478,694
  84,478,966
  84,479,273
  84,480,275
  84,480,287
  84,480,407
  84,480,623
  84,481,367
  84,481,811
  84,481,910
  84,482,595
  84,484,275
  84,485,395
  84,485,431
  84,485,432
  84,485,470
  84,485,624
  84,486,266
  84,492,846
  84,493,120
  84,493,149
  84,493,230
  84,493,388
  84,493,579
  84,493,676
  84,493,697
  84,493,770
  84,493,774
  84,493,879
  84,493,958
  84,494,042
  84,494,115
  84,494,240
  84,494,318
  84,494,367
  84,494,550
  84,494,784
  84,494,940
  84,495,066
  84,495,179
  84,495,287
  84,495,752
  84,495,761
  84,495,895
  84,496,160
  84,496,409
  84,496,491
  84,497,202
  84,497,411
  84,497,687
  84,498,093
  84,498,337
  84,498,791
  84,498,830
  84,499,503
  84,500,584
  84,502,290
  84,502,466
  84,502,467
  84,503,392
  84,503,903
  84,503,935
  84,504,334
  84,504,908
  84,505,360
  84,505,885
  84,506,148
  84,506,754
  84,508,418
  84,508,422
  84,508,867
  84,509,051
  84,509,979
  84,510,308
  84,510,603
  84,511,780
  84,512,879
  84,513,082
  84,513,101
  84,514,414
  84,514,628
  84,515,084
  84,515,185
  84,515,520
  84,515,543
  84,515,791
  84,516,033
  84,516,127
  84,516,262
  84,518,120
  84,518,129
  84,518,469
  84,518,899
  84,520,159
  84,520,949
  84,521,013
  84,521,530
  84,522,076
  84,523,341
  84,523,494
  84,524,127
  84,525,043
  84,525,134
  84,525,475
  84,526,761
  84,528,062
  84,529,079
  84,529,204
  84,531,698
  84,532,200
  84,533,434
  84,536,412
  84,536,783
  84,536,805
  84,536,860
  84,538,662
  84,538,907
  84,540,051
  84,540,139
  84,542,126
  84,542,537
  84,543,805
  84,543,989
  84,544,181
  84,547,939
  84,548,560
  84,548,860
  84,549,734
  84,549,935
  84,550,337
  84,550,414
  84,550,523
  84,551,102
  84,551,287
  84,551,562
  84,552,896
  84,553,531
A/G
T/3
T/C
G/T
T/C
A/C
G/T
A/G
C
G/A
C
-
T/A
A/G
G/A
T/C
A/T
A/2
C/T
G/A
A
A/C
G/A
C/G
T/C
T
G/A
A
A/G
A/C
T/G
G/C
C/T
C/T
C/T
C/-
C/-
C/G
A/5
G/C
2
A
A/G
G/A
A/G
C/T
T/C
A/G
2
A/2
T/2
G/A
C
C
7
5
A
A
A
-
T
A
G
2
A
T
A
A
C
A
6
T
-
A
6
G
T
A
A
T
2
C
C
T
G
T
A
A
A
C
A
T
C
A
C
-
2
C
G
C
A
A
T
G
G
T
5
2
A
A
T
T
A
-
C
2
T
2
T
G
T
G
A
C
A
G
A
C
C
2
G
T
T
T
-
G
G
A
A
A
T
T
A
T
C
T
A
T
A
G
C
-
T
A
2
A
T
C
A
C
C
T
T
T
T
5
-
A
G
A
C
G
C
C
C
-
G
-
T
C
G/A
A/G
T
T
-
A
G
A/C
C
G
T
T
G
T
2
-
T
-
G
C
-
C
C
G
G
G
C
A
A
T
A
-
G
G
T
T
5
-
T
C
T
G
A
C
6
C
C
G
T
C
T
T
A
-
G
G
2
A
T
8/-
2
A
A
T
-
G
C
T
G
T
C
-
-
G
2
G
C
T
G
-
T
T
C
C
3
-
A
C
T
G
G
2
G
A
A
A
G
T
C
T
T
2
A
G
2
T
A
G
5
A
G
C
-
A
A
C
G
G
T
-
T
A
A
2
T
C
C
T
A
-
G
T
T
A
A
A
C
G
T
G
C
C
4
43
5
T
G
-
2
T
-
G
-
T
2
G
A
A
G
A
T
C
A
C
C
G
A
T
C
A
2
A
C
C
A
2
C
G
C
G
C
T
T
C
A
T
T
A
G
G
T
T
C
G
-
T