Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 26,963 (bp)   Positions: 84
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
SS/Jr (KNAW) 
.0
.035
.045
.001
.001
.035
.009
.006
.095
.034
.001
.004
.058
.002
.02
.011
.024
.026
.045
.005
.109
.002
.011
.0
.001
.025
.0
.001
.039
.033
.018
.001
.001
.0
.412
.002
.0
.002
.0
.013
.006
.002
.004
--
--
--
.302
.211
.11
.237
.426
.01
.009
.014
.003
.0
.022
.233
.0
.005
.023
.594
.0
.067
.0
.001
.0
.0
.0
.0
.0
.16
.069
.089
.078
.113
.0
.001
.018
.027
.017
.013
.0
.003
Ppm1k
Ppm1k
Ppm1k
Ppm1k
Ppm1k
Ppm1k
Ppm1k
Ppm1k
Ppm1k
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
T
G
A
C
A
T
G
2
T
C
C
G
T
A
C
A
14
G
G
A
A
A
T
T
C
T
T
C
10
T
T
T
A
A
A
A
T
C
C
C
14
2
16
4
8
10
A
G
G
G
T
A
C
G
G
T
T
C
G
C
A
C
G
A
G
T
G
C
A
G
T
A
C
20
16
G
2
T
T
2
A
C
G
G
  153,516,621
  153,518,468
  153,518,924
  153,519,355
  153,519,395
  153,519,505
  153,519,596
  153,519,609
  153,519,849
  153,519,962
  153,520,541
  153,520,744
  153,521,219
  153,521,620
  153,521,984
  153,522,679
  153,522,870
  153,523,565
  153,524,041
  153,524,742
  153,524,951
  153,526,620
  153,527,318
  153,527,362
  153,528,174
  153,528,879
  153,529,033
  153,529,125
  153,529,672
  153,529,965
  153,529,995
  153,531,085
  153,531,087
  153,531,198
  153,531,689
  153,532,026
  153,532,949
  153,533,084
  153,533,445
  153,535,835
  153,536,165
  153,536,201
  153,536,222
  153,536,399
  153,536,409
  153,536,427
  153,536,893
  153,537,036
  153,537,111
  153,537,470
  153,537,522
  153,537,591
  153,537,598
  153,538,031
  153,538,252
  153,538,332
  153,538,838
  153,539,031
  153,539,424
  153,539,450
  153,539,632
  153,539,980
  153,540,498
  153,540,621
  153,540,801
  153,540,810
  153,540,948
  153,540,980
  153,541,017
  153,541,189
  153,541,196
  153,541,229
  153,541,237
  153,541,305
  153,541,309
  153,541,505
  153,541,580
  153,541,599
  153,541,633
  153,542,052
  153,542,064
  153,542,342
  153,542,717
  153,542,774
A
A
T
T
C
2
G/5
2/-
-
T
T
A
A
AC/3
T
C
-
A
A
21
C
C
C
-
G
C
C
5
-
C
C
3
G
G
2
G
C
3
G
A
14/-
-
-
-
-
-
G
T
A
3
A
T
A
A
C
A
C
T
T
-
3
T
C
G
A
-
C
A
G
A
C
G
T
20/-
-
T
-
C
C
-
G
T
T
T