Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 103,702 (bp)   Positions: 177
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
WKY/NHsd (KNAW) 
.001
.002
.035
.148
.017
.002
.071
.032
.133
.017
.001
.033
--
--
--
.154
.053
.0
.003
--
.064
--
--
.152
.003
.213
--
--
--
.013
.003
.0
.011
.315
.056
.002
.008
.013
.006
.005
.034
.277
.27
.001
.011
.003
.034
.045
.006
.049
.005
.006
.002
.0
.002
.001
.347
.0
.001
.025
.132
.097
.006
.0
--
--
.012
.064
.01
.924
.404
.0
.996
.051
.016
.007
.019
.001
.005
.001
.0
.001
.263
.0
.001
--
.016
.101
.037
.001
.01
--
--
--
--
--
.01
.0
.001
.0
.467
.01
.001
.076
.004
.002
.001
--
--
--
--
--
.002
.346
--
.0
.0
.0
.001
.001
.983
.001
.0
.054
.003
1.0
.031
--
.01
.703
.06
--
.029
.055
.014
.005
.0
.146
.002
.354
.861
.001
.009
.121
.593
.001
.003
.013
.624
.015
.015
.001
.318
.002
.18
.005
.003
.02
.019
--
--
.001
.005
.001
.236
--
.002
.482
.279
.11
--
--
.003
.161
.052
.002
.001
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Polr3b
Polr3b
Polr3b
Polr3b
Polr3b
Polr3b
Polr3b
Polr3b
Polr3b
Polr3b
Polr3b
Polr3b
Polr3b
Polr3b
Polr3b
Polr3b
Polr3b
Polr3b
3
2
G
C
2
C
C
A
T
C
T
A
T
19
G
A
15
C
T
G
G
A
G
A
C
A
G
T
15
C
T
G
G
A
2
C
T
C
T
C
C
T
T
A
G
C
A
T
T
C
A
C
T
C
C
C
T
A
G
G
C
T
A
T
C
C
G
A
A
C
A
A
C
G
2
A
T
A
T
C
C
T
A
T
A
12
G
C
T
8
4
A
C
T
G
T
C
C
C
G
A
T
G
T
C
A
C
A
A
A
C
C
C
G
A
T
C
A
A
A
A
G
C
C
A
A
G
G
T
G
C
3
C
T
T
A
C
T
C
A
G
A
A
4
C
C
A
A
A
A
G
C
C
6
A
A
C
T
A
C
A
A
C
G
C
G
C
127
C
A
3
T
G
C
G
A
C
  24,894,982
  24,894,983
  24,896,012
  24,896,662
  24,897,190
  24,897,851
  24,898,117
  24,899,631
  24,899,801
  24,899,810
  24,899,873
  24,900,017
  24,900,423
  24,900,427
  24,900,470
  24,900,819
  24,900,862
  24,901,591
  24,901,606
  24,903,378
  24,903,428
  24,903,773
  24,903,915
  24,904,979
  24,905,864
  24,906,281
  24,906,431
  24,906,520
  24,906,889
  24,908,068
  24,909,287
  24,909,961
  24,911,193
  24,911,243
  24,912,918
  24,916,495
  24,917,428
  24,917,761
  24,918,157
  24,919,398
  24,919,800
  24,920,298
  24,920,486
  24,921,205
  24,921,585
  24,922,598
  24,923,037
  24,923,038
  24,923,229
  24,924,182
  24,924,718
  24,925,624
  24,926,792
  24,926,834
  24,927,553
  24,927,843
  24,928,533
  24,928,936
  24,929,950
  24,930,213
  24,931,669
  24,931,678
  24,931,761
  24,933,093
  24,933,548
  24,933,620
  24,933,666
  24,934,710
  24,934,979
  24,935,211
  24,937,767
  24,938,115
  24,939,709
  24,940,561
  24,940,664
  24,942,086
  24,942,723
  24,943,551
  24,943,914
  24,944,026
  24,944,028
  24,944,200
  24,944,242
  24,945,568
  24,945,617
  24,945,873
  24,946,557
  24,949,097
  24,949,702
  24,950,065
  24,950,314
  24,951,075
  24,951,296
  24,951,767
  24,951,918
  24,951,928
  24,952,167
  24,952,950
  24,953,666
  24,954,104
  24,954,582
  24,954,798
  24,954,883
  24,955,467
  24,956,565
  24,956,844
  24,956,932
  24,958,771
  24,959,805
  24,959,806
  24,960,679
  24,960,715
  24,961,182
  24,961,249
  24,961,811
  24,964,321
  24,964,324
  24,964,334
  24,964,340
  24,964,468
  24,965,068
  24,966,233
  24,966,266
  24,966,271
  24,966,325
  24,966,501
  24,968,331
  24,968,847
  24,969,204
  24,969,524
  24,969,574
  24,969,748
  24,970,905
  24,970,919
  24,970,957
  24,972,074
  24,972,632
  24,973,012
  24,973,182
  24,974,892
  24,976,365
  24,976,975
  24,977,397
  24,977,666
  24,977,689
  24,978,025
  24,978,283
  24,978,696
  24,978,905
  24,979,155
  24,979,375
  24,980,505
  24,980,556
  24,980,722
  24,982,149
  24,983,545
  24,984,340
  24,984,886
  24,985,082
  24,985,225
  24,985,294
  24,985,689
  24,986,837
  24,987,057
  24,988,191
  24,988,598
  24,989,411
  24,990,879
  24,992,147
  24,992,773
  24,993,036
  24,993,038
  24,993,158
  24,993,421
  24,995,756
  24,996,287
  24,996,592
3/-
2/-
A
T
2/-
G
G
C
C
T
C
G
-
-
C
G
-
T
G
-
A
5/7
15
A/-
-
13
A
C
-
C/2
C
A
3
-
-
A
C
T
C
T
G
A
T/3
11
T
T
T
A
G
T
19
T
G
T
A
A
C
G
2
A
C/6
T/7
G
C
C/2
A
A
T
2
?
G
G
2
A
-
G
C
C
9
T
T
C
G
C
G
-
A
T
C
8/-
-
T
C/2
C
G/15
17
2
-
T
-
G
C
A
-
G
G
A
T
-
C
2
-
25
A
4
C
2
2
-
T
G
A
A
2
G
G
2
C
C
A
T
-
C/11
T/16
A
G
T
G
A
G
A
-
G
-
G
T
G
G
C
G
A
T
T
-
G
G
T
C
9
T
6
2
T
T
A
A
T
-
A
G
-
5
9
A
A
T
A