Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 67,221 (bp)   Positions: 83
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
F344/NHsd (KNAW) 
.032
.974
.114
.072
.845
.288
.093
.012
.003
.092
.134
.127
.091
.006
.002
.079
.001
.032
.008
.004
.002
.21
--
.011
.941
.675
.011
.003
.008
--
--
.008
--
.489
.748
--
--
--
--
--
--
--
--
--
.287
--
.002
.071
--
--
--
--
--
--
--
.052
.007
.037
.119
.106
.0
.0
.46
.0
.0
.01
--
--
.109
.854
.012
.0
.008
.0
.004
.002
.004
.0
.066
--
.087
.006
.09
Pkig
Pkig
Pkig
Pkig
Pkig
Pkig
Pkig
Pkig
Pkig
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
2
A
2
C
C
C
A
C
G
C
G
G
T
G
G
C
C
A
G
G
C
C
T
C
A
15
A
C
T
C
T
T
T
A
2
20
G
A
A
A
C
A
C
C
T
C
T
A
G
A
C
A
T
3
T
C
A
A
5
4
4
3
C
T
T
A
T
3
A
T
G
C
C
T
T
G
A
C
G
3
T
C
2
  166,238,511
  166,238,725
  166,238,884
  166,239,332
  166,239,418
  166,239,803
  166,240,636
  166,241,054
  166,241,679
  166,241,838
  166,241,915
  166,242,407
  166,243,131
  166,243,148
  166,243,519
  166,244,037
  166,244,504
  166,245,254
  166,245,429
  166,245,497
  166,246,102
  166,248,517
  166,249,201
  166,252,464
  166,253,329
  166,253,382
  166,253,502
  166,253,648
  166,253,678
  166,255,241
  166,255,242
  166,255,519
  166,258,573
  166,258,812
  166,259,170
  166,259,467
  166,259,812
  166,261,079
  166,261,084
  166,261,152
  166,261,164
  166,261,169
  166,261,177
  166,261,181
  166,262,617
  166,263,412
  166,263,618
  166,263,818
  166,264,348
  166,264,373
  166,264,507
  166,264,647
  166,264,712
  166,264,882
  166,264,886
  166,267,481
  166,269,775
  166,271,291
  166,272,205
  166,272,206
  166,272,897
  166,272,898
  166,273,209
  166,273,503
  166,275,865
  166,279,758
  166,280,861
  166,281,163
  166,281,323
  166,281,604
  166,287,057
  166,290,197
  166,290,324
  166,290,541
  166,290,578
  166,290,579
  166,290,603
  166,291,010
  166,295,092
  166,297,196
  166,297,258
  166,299,161
  166,299,736
-
-
-
T
?
T
G
T
T
T
A
A
C
16
A
T
-
G
T
25
C/-
T
-
T
A/2
15/-
T
T
-
C/2
T/-
5
C
9
-
20/-
7
-
-
-
-
-
-
-
C
9
7
G
A
2
G
G
C
-
-
7
A/12
G
5/-
4/-
4/-
-
T
C
T/3
T
T/2
3/-
2
9/7
A
G
T
C
G
T
G
C/2
7
3/--
-
C/5
2/-