Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 92,457 (bp)   Positions: 159
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
WN/N (KNAW) 
.053
.003
.002
.001
.013
.11
--
--
--
--
--
.044
.012
.011
--
.073
.017
.01
.002
.036
.0
.002
.015
.022
.077
.006
.002
.002
.036
.112
.002
.001
.0
.838
.019
--
--
.009
.112
.002
.002
.059
.021
--
--
--
--
.013
--
--
.024
--
.022
.0
--
.578
.035
.008
.032
.247
--
--
--
--
--
--
--
.094
.02
.0
.003
.0
.077
.002
.005
.026
.002
.004
.001
.0
.002
.026
.403
.0
.069
.015
.009
.0
.73
.074
.028
.461
.009
.236
.004
.025
.044
--
.001
.001
.007
.115
--
.022
.005
.004
.008
.033
.002
.033
--
--
--
--
--
--
.02
.033
.004
.024
.066
.011
.197
.001
.0
--
--
--
--
.101
.139
.006
.061
--
.013
.16
.003
.006
.044
.004
.375
.321
.039
.039
.789
.012
.066
.001
.0
.104
.002
.0
.004
.146
.004
.012
.001
.1
.004
Pcnt
Pcnt
Pcnt
Pcnt
Pcnt
Pcnt
Pcnt
Pcnt
Pcnt
Pcnt
Pcnt
Pcnt
Pcnt
Pcnt
Pcnt
Pcnt
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
C
A
C
A
G
T
C
T
C
A
C
C
T
T
T
A
C
T
T
G
T
T
T
G
G
C
T
C
C
T
C
C
T
G
T
T
G
T
T
G
C
T
G
C
A
A
T
T
C
T
A
T
A
G
G
T
T
T
C
T
A
A
A
T
C
T
G
G
A
A
G
C
T
C
A
4
G
C
G
T
C
G
G
T
T
A
A
T
T
T
G
T
T
G
G
G
C
G
A
C
T
G
G
52
G
C
C
G
G
4
A
T
T
A
C
C
G
C
A
A
A
G
6
G
C
T
T
A
T
G
T
A
G
C
C
G
T
C
C
T
A
G
A
C
A
A
A
A
T
T
A
G
2
G
A
C
A
A
C
  15,105,498
  15,105,515
  15,105,887
  15,106,175
  15,106,537
  15,106,563
  15,106,811
  15,106,839
  15,107,368
  15,107,369
  15,107,409
  15,108,645
  15,109,216
  15,109,646
  15,110,616
  15,110,793
  15,110,874
  15,112,132
  15,112,525
  15,112,753
  15,112,976
  15,113,223
  15,113,928
  15,114,169
  15,114,607
  15,114,984
  15,115,242
  15,115,467
  15,115,527
  15,116,164
  15,116,528
  15,116,555
  15,116,768
  15,117,019
  15,117,137
  15,117,451
  15,117,488
  15,118,263
  15,119,232
  15,119,402
  15,119,425
  15,120,463
  15,120,928
  15,122,861
  15,122,913
  15,122,942
  15,123,304
  15,124,075
  15,125,077
  15,125,093
  15,128,091
  15,129,225
  15,129,610
  15,130,232
  15,139,418
  15,140,082
  15,140,176
  15,140,271
  15,140,453
  15,140,466
  15,141,436
  15,142,468
  15,142,494
  15,142,844
  15,142,846
  15,143,438
  15,144,001
  15,145,070
  15,146,235
  15,146,455
  15,146,473
  15,146,605
  15,146,783
  15,147,296
  15,147,595
  15,147,653
  15,148,287
  15,148,335
  15,148,381
  15,148,480
  15,148,482
  15,148,579
  15,148,781
  15,148,798
  15,149,740
  15,149,835
  15,149,841
  15,151,108
  15,155,120
  15,155,333
  15,155,776
  15,156,024
  15,156,084
  15,156,456
  15,157,647
  15,157,759
  15,158,140
  15,159,082
  15,162,644
  15,162,868
  15,164,473
  15,165,108
  15,166,276
  15,168,667
  15,168,913
  15,168,915
  15,169,025
  15,169,111
  15,169,666
  15,169,841
  15,170,036
  15,170,184
  15,170,474
  15,170,583
  15,171,425
  15,171,490
  15,172,186
  15,172,934
  15,173,040
  15,173,277
  15,173,643
  15,174,019
  15,174,097
  15,174,366
  15,175,148
  15,177,531
  15,177,755
  15,178,128
  15,178,490
  15,179,913
  15,180,170
  15,180,233
  15,181,224
  15,182,836
  15,183,121
  15,183,267
  15,183,458
  15,183,461
  15,183,476
  15,183,543
  15,183,962
  15,184,408
  15,184,621
  15,184,627
  15,184,665
  15,184,785
  15,184,887
  15,185,604
  15,185,856
  15,186,051
  15,186,430
  15,187,323
  15,188,929
  15,189,054
  15,191,621
  15,192,714
  15,193,374
  15,194,674
  15,194,993
T
G
T
G
A
C
T
C
T
C
G
T
C
C
C
G
T
C
C
C
C
C
-
T
G/A
3
C
C/G
G
C
T
T
C
G/2
C
-
A
C
C
A
T
C
C
T
A/4
2
C
T/C
T
2
G
C
G
C
A
3
C
C
T
C
C
A/G
T
T/-
C/4
C
T
A
A/2
G
A
T
C
T
G
-
A
T
T
A
T
A
G/A
C
C
C
G
C
A
T/A
A
C
C
A
A
A
T
G/11
G
T
A
A
T
52/-
C
T
-
A
C
-
G
8
C
G
2
T
G/-
T
G
G
C
A
-
A
-
C
C
G
T/C
A
2
G
A
T
T
G/A
-
T
T
C
G
A
A/G
C/T
G
G
G
A/2
C
C
G
C
-
T
G
T
G
-
T