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  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 53,716 (bp)   Positions: 248
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
COP/CrCrl (MCW & UW) 
.027
.009
.028
.076
.013
.051
.015
.023
.026
.024
.01
.002
.002
.142
.163
.153
.003
.001
.004
.002
.218
.005
.017
.002
.003
.003
.002
.325
.003
.003
.002
.39
.197
.01
.035
.011
.025
.604
.677
.695
.003
.001
.052
.005
.001
.0
.041
.091
.003
.003
.002
.078
.033
.062
.046
.147
.187
.099
.01
.265
.158
.035
--
.004
.018
.008
.02
.0
.0
.01
.005
.015
.023
.018
.018
.016
.033
.433
.028
.034
.003
.001
.004
.32
.025
.002
.018
.012
.081
.132
.103
.083
.021
.066
.017
.007
.19
.008
.056
.01
.16
.197
.017
.043
.487
.025
.005
--
--
--
--
--
.049
--
--
--
--
--
.018
.002
.001
.003
.02
.068
.065
.05
.047
.471
.059
.018
.003
.305
.003
.056
.06
.018
.002
.317
.382
.009
.024
.003
.0
1.0
.0
.255
.002
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.186
.26
.005
.006
.003
.001
.009
.002
.001
.017
.054
.024
.013
.022
.006
.024
.108
.012
.051
--
--
.142
.005
.069
.05
.05
.003
.008
.039
.043
.001
.002
.012
.035
.117
.079
.059
--
--
.2
.101
--
.16
.001
.004
.0
.008
.005
.096
.115
.009
.057
--
--
--
--
.117
--
.001
1.0
.0
.0
.008
.135
.051
.03
.024
.007
.007
.002
.001
Nt5dc3
Nt5dc3
Nt5dc3
Nt5dc3
Nt5dc3
Nt5dc3
Nt5dc3
Nt5dc3
Nt5dc3
Nt5dc3
Nt5dc3
Nt5dc3
Nt5dc3
Nt5dc3
Nt5dc3
Nt5dc3
Nt5dc3
Nt5dc3
Nt5dc3
Nt5dc3
Nt5dc3
Nt5dc3
Nt5dc3
Nt5dc3
Nt5dc3
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9
A
G
T
T
C
C
C
C
T
C
A
T
8
A
2
T
T
T
C
G
T
C
C
A
2
C
T
A
T
C
A
8
T
C
A
C
G
3
C
A
T
C
T
C
A
G
T
C
T
C
T
T
G
C
C
C
T
T
C
A
A
G
A
6
T
T
G
C
G
C
T
G
T
A
G
G
T
G
T
G
T
G
T
C
A
A
T
T
C
A
A
T
G
T
C
G
G
T
G
T
C
G
A
T
G
C
T
T
G
G
G
T
G
4
T
C
A
A
C
G
T
A
T
G
G
4
A
C
A
C
G
G
G
T
T
T
C
G
C
C
C
G
T
C
C
G
T
C
T
T
A
A
C
A
A
A
A
G
A
C
A
G
G
T
C
G
C
T
G
A
C
C
C
C
C
G
A
C
G
G
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T
C
G
C
C
C
C
12
G
T
T
G
G
C
C
T
T
T
G
G
G
10
G
G
C
C
G
C
C
A
A
A
2
2
A
C
T
22
G
T
C
C
G
T
C
5
C
G
T
A
G
C
G
T
A
G
C
C
C
T
C
C
G
G
G
A
  27,430,789
  27,431,492
  27,431,769
  27,432,103
  27,432,223
  27,432,367
  27,432,734
  27,432,749
  27,432,752
  27,432,765
  27,433,140
  27,433,285
  27,433,326
  27,433,384
  27,433,402
  27,433,420
  27,433,453
  27,433,589
  27,433,715
  27,433,723
  27,433,786
  27,433,968
  27,434,120
  27,434,262
  27,434,268
  27,434,270
  27,434,271
  27,434,421
  27,434,577
  27,434,730
  27,435,110
  27,435,356
  27,435,517
  27,435,550
  27,435,636
  27,435,714
  27,435,723
  27,435,939
  27,435,950
  27,435,980
  27,436,273
  27,436,333
  27,436,464
  27,436,550
  27,436,558
  27,436,559
  27,436,782
  27,436,820
  27,436,906
  27,436,911
  27,436,912
  27,437,502
  27,437,532
  27,437,599
  27,437,621
  27,437,673
  27,437,713
  27,437,717
  27,437,763
  27,438,028
  27,438,452
  27,438,540
  27,438,612
  27,438,771
  27,438,808
  27,438,858
  27,438,992
  27,439,000
  27,439,030
  27,439,124
  27,439,185
  27,439,221
  27,439,236
  27,439,241
  27,439,246
  27,439,256
  27,439,262
  27,439,350
  27,439,395
  27,439,397
  27,439,474
  27,439,611
  27,439,678
  27,439,835
  27,440,325
  27,440,433
  27,440,449
  27,440,454
  27,440,467
  27,440,517
  27,440,524
  27,440,538
  27,440,574
  27,440,704
  27,440,958
  27,441,444
  27,441,541
  27,441,628
  27,441,670
  27,441,684
  27,441,717
  27,441,727
  27,441,794
  27,441,920
  27,442,166
  27,442,295
  27,442,332
  27,445,087
  27,445,089
  27,445,115
  27,445,121
  27,445,127
  27,445,303
  27,446,192
  27,447,076
  27,447,208
  27,447,215
  27,447,296
  27,447,770
  27,447,871
  27,448,009
  27,448,150
  27,448,295
  27,448,373
  27,448,617
  27,448,621
  27,448,701
  27,448,898
  27,449,017
  27,449,050
  27,449,161
  27,449,177
  27,449,423
  27,449,482
  27,449,497
  27,449,658
  27,449,765
  27,449,816
  27,449,819
  27,449,895
  27,449,954
  27,450,006
  27,450,014
  27,450,255
  27,450,423
  27,450,466
  27,450,570
  27,450,660
  27,450,694
  27,450,718
  27,450,765
  27,450,782
  27,450,805
  27,450,839
  27,450,849
  27,450,965
  27,450,972
  27,450,992
  27,451,031
  27,451,091
  27,451,099
  27,451,128
  27,451,130
  27,451,142
  27,451,143
  27,451,153
  27,451,156
  27,451,200
  27,451,231
  27,451,244
  27,451,449
  27,451,591
  27,451,611
  27,451,630
  27,451,701
  27,451,729
  27,451,750
  27,451,816
  27,451,820
  27,451,861
  27,451,883
  27,452,182
  27,452,231
  27,452,241
  27,452,252
  27,452,262
  27,452,266
  27,452,271
  27,452,307
  27,452,488
  27,452,584
  27,452,594
  27,452,623
  27,453,232
  27,453,644
  27,454,135
  27,454,633
  27,454,634
  27,455,076
  27,458,272
  27,460,061
  27,460,081
  27,460,084
  27,460,490
  27,460,523
  27,460,876
  27,461,547
  27,462,260
  27,462,989
  27,463,246
  27,463,318
  27,463,686
  27,463,713
  27,464,531
  27,465,224
  27,465,246
  27,465,676
  27,465,759
  27,466,104
  27,466,333
  27,466,542
  27,466,592
  27,466,606
  27,466,610
  27,468,564
  27,469,003
  27,469,228
  27,470,081
  27,471,148
  27,472,150
  27,472,153
  27,472,162
  27,472,164
  27,476,707
  27,477,905
  27,479,226
  27,479,909
  27,480,096
  27,480,117
  27,480,715
  27,481,399
  27,482,960
  27,483,217
  27,483,228
  27,483,778
  27,483,958
  27,483,968
  27,484,174
-
G
A
C
G
T
C/-
-
C/-
T/-
T
5
G
-
A/G
-
C
G
2
A
A
C
T
C/A
3
-
C/2
C
T
-
T
G
-
C
G
G
T
3
-
T
C
C
T
G
T
G
A
-
T
C
A
C
A
A
T
T
T
C
C
T
G
G
-
T
-
C
A
C
G
C
T
C
6
C
C
T
C
C
A
G
A
C
A
-
T
C
G
C
C
A
G
T
C
A
C
T
C
A
-
A
C
T
A
T
C
A
T
T/2
T/-
G/T
G/3
G/T
C
A
-
C
T
G
G
T
A
C
G
A
T
C
-
G
A
G
T
A
A
A
A
T/A
C
G
A
T
T
G
A
C
T
T
A
A
G
C
C
C
G
T
T
2
G
G
2
T
T
G
A
2
2
-
2
T
C
A
G
A
T
A
A
G
A
G
T
A
T
T
C
T
2
A
T
T
A
-
A
T/2
T/2
G/3
A
G
C/2
T/-
2
C
A
A
A
10/-
G/C
A
T
A
A
T
T
G
G
G
-
-
T
A
A
22/-
A
C
T
G
A
C
T
-
T
C
C
C
C
T
A
A
2
T
T
T
T
C
16
C/T
A
3
A
G