Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 49,298 (bp)   Positions: 85
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
GK/Ox (KNAW) 
.018
.0
.013
.002
.019
.013
.007
.014
.006
.317
.086
.328
.218
.785
.041
.003
.0
.025
.031
.004
--
--
.0
.02
.018
.003
--
--
.484
.051
.012
--
.001
.001
.018
.003
.438
--
.003
.001
.003
.02
.024
.001
.747
.01
.003
.001
.026
.001
.116
.002
--
.0
.0
.518
.0
.006
.031
.0
.026
.112
.0
.003
.767
.002
.0
.0
.007
.073
.027
.0
.004
.018
.0
.005
.037
.028
.006
.001
.0
.0
.0
.0
.011
Niban2
Niban2
Niban2
Niban2
Niban2
Niban2
Niban2
Niban2
Niban2
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Lrsam1
C
C
C
T
T
T
2
C
T
T
T
T
C
2
A
G
G
T
G
A
G
12
C
10
8
A
4
2
C
G
G
G
C
T
A
C
T
G
A
4
T
6
T
T
T
T
G
A
G
G
C
5
C
A
G
A
C
C
T
T
T
T
A
C
C
G
T
A
G
A
A
T
C
T
G
G
C
C
G
C
T
T
G
C
T
  17,258,093
  17,258,527
  17,259,002
  17,259,077
  17,259,086
  17,259,093
  17,260,234
  17,260,700
  17,261,187
  17,262,506
  17,262,514
  17,262,615
  17,262,864
  17,262,887
  17,262,959
  17,263,346
  17,263,520
  17,263,988
  17,264,148
  17,264,344
  17,265,534
  17,265,753
  17,266,662
  17,267,619
  17,267,621
  17,267,771
  17,268,998
  17,269,000
  17,269,279
  17,270,278
  17,271,195
  17,271,285
  17,271,440
  17,272,016
  17,272,541
  17,272,628
  17,272,776
  17,273,693
  17,274,184
  17,274,284
  17,274,308
  17,274,321
  17,274,353
  17,274,699
  17,275,751
  17,275,769
  17,275,792
  17,275,799
  17,277,082
  17,278,045
  17,278,083
  17,278,330
  17,279,029
  17,281,653
  17,282,183
  17,282,289
  17,283,501
  17,283,709
  17,284,291
  17,287,302
  17,289,427
  17,290,436
  17,290,762
  17,293,238
  17,293,563
  17,296,154
  17,296,391
  17,296,757
  17,297,867
  17,298,289
  17,298,394
  17,299,423
  17,299,678
  17,300,365
  17,300,704
  17,300,775
  17,303,331
  17,303,682
  17,303,953
  17,304,460
  17,304,482
  17,305,306
  17,305,375
  17,305,998
  17,306,876
2
T
-
-
G
G
-
T
C
2
2
G
2
-
2
A
A
C
C
C
4/6
-
-
10/-
8/-
G
4/-
2/-
T
2
T
25
T
C
2
T
C
C
C
-
C
-
2
C
2
2
7
C
A
A
T
-
6
T
A
G
A
T
49
C
C
2
G
T
T
-
C
G
T
T
C
C
T
C
A
A
C/5
T
T
T
G
C
-
G
C