Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 95,927 (bp)   Positions: 116
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
GK/Ox (KNAW) 
.195
.237
.855
.995
.997
.003
.001
.008
.0
.952
.0
.001
.142
.807
.008
.033
.004
.002
.001
.0
.007
.753
.0
.093
.003
.015
.018
.001
.072
.0
.012
.06
.006
.014
.007
.001
.922
.002
.003
.0
.292
.0
.001
--
--
--
.226
.266
.322
.724
.004
.023
.0
.991
.0
.035
.0
.0
.144
.276
--
.01
.148
.254
.018
.048
.055
.012
1.0
.003
.0
.249
.019
.04
.0
.005
.003
.001
.004
.009
.202
.952
.61
.633
.423
.151
.815
.003
.031
.008
.107
.001
.001
.055
.951
.0
.522
.086
.015
.035
.032
.0
.0
.969
.996
.0
.998
.846
.002
.013
.002
.0
.001
.004
.002
.001
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
LOC102546551
LOC102546551
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Nfix
Nfix
Nfix
Nfix
Nfix
Nfix
Nfix
Nfix
Nfix
Nfix
Nfix
Nfix
5
4
A
C
C
G
C
A
A
G
G
T
G
G
A
C
A
G
C
T
T
2
T
T
C
6
A
G
C
4
G
C
T
T
C
10
A
C
G
A
C
2
A
C
2
50
A
T
A
A
C
T
T
A
C
G
C
G
G
T
C
T
G
C
G
2
A
G
C
G
G
A
T
8
C
C
T
G
A
A
G
6
4
G
T
22
A
C
C
10
T
2
C
G
T
G
C
T
A
16
14
A
G
A
G
A
T
G
A
A
2
C
T
2
G
11
  36,795,271
  36,795,272
  36,795,306
  36,795,501
  36,795,506
  36,800,862
  36,800,876
  36,800,880
  36,801,037
  36,802,604
  36,803,138
  36,803,295
  36,803,854
  36,805,281
  36,806,155
  36,807,037
  36,808,747
  36,810,814
  36,812,150
  36,815,041
  36,816,208
  36,818,447
  36,818,549
  36,818,760
  36,819,054
  36,819,336
  36,820,565
  36,821,794
  36,821,814
  36,821,829
  36,823,732
  36,826,282
  36,827,719
  36,828,458
  36,828,688
  36,832,237
  36,833,679
  36,834,490
  36,834,505
  36,834,506
  36,834,550
  36,835,962
  36,836,211
  36,837,372
  36,837,428
  36,837,607
  36,837,814
  36,838,087
  36,838,764
  36,839,350
  36,839,666
  36,839,800
  36,839,862
  36,839,887
  36,840,527
  36,842,088
  36,842,425
  36,842,493
  36,842,650
  36,843,930
  36,844,036
  36,844,774
  36,845,903
  36,846,242
  36,847,964
  36,848,444
  36,848,705
  36,849,970
  36,850,768
  36,852,309
  36,852,513
  36,854,067
  36,854,082
  36,854,205
  36,854,290
  36,855,851
  36,857,674
  36,857,918
  36,858,260
  36,858,282
  36,859,304
  36,860,832
  36,862,914
  36,862,954
  36,863,194
  36,864,633
  36,864,690
  36,865,388
  36,866,184
  36,866,773
  36,867,812
  36,867,842
  36,870,985
  36,870,996
  36,871,041
  36,871,398
  36,871,568
  36,873,517
  36,874,084
  36,875,530
  36,875,531
  36,875,641
  36,876,271
  36,877,769
  36,877,889
  36,878,035
  36,879,196
  36,879,999
  36,882,391
  36,882,772
  36,883,501
  36,883,747
  36,885,443
  36,887,706
  36,888,177
  36,888,179
-
4/-
A/-
C/2
A
2
-
2
5
-
A
3
-
A
T
T
G
A
G
C
C
-
-
-
T
-
G
2
-
-
A
A
2
A
T
-
-
C/8
A
A/9
T
-
11
10
-
-
G
C
9
-
-
C
C
G
T
G/3
A
3/5
T
C
T
C
-
2
C
-
G
A
T
A
A
G
G
-
G
T
C
4
-
7
A
-
-
2
C
22/-
T
A
T
-
C
-
5
3/GT
A
4/3
G
-
4/3
16/-
14/-
C
A
5
A
G
7
-
-
T
-
T
G
-
-
-