Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 81,738 (bp)   Positions: 229
Conservation 
Genes ( + ) 
Genes ( - ) 
Genes ( - ) 
Rnor 5.0  
SBH/Ygl (MCW) 
.004
.155
.341
.001
.002
.001
.001
.002
--
--
.003
.014
.005
.0
.001
.038
.0
.0
.0
.014
.009
.024
.022
.071
.015
.039
.011
.003
.001
.004
.989
.0
.005
.041
.014
.185
.133
.0
.034
.0
.0
.001
.0
.001
.001
.017
.056
.001
.064
.025
--
.001
--
--
.011
.344
.799
.0
.077
.001
.008
.011
.378
.044
.029
.002
.126
.001
.005
.0
.0
.0
.008
.0
.053
.007
.0
.002
.014
.562
.002
.41
--
--
.001
.002
--
--
--
--
--
--
--
.004
.003
.028
.46
.362
.009
.006
.005
.012
.001
.005
.0
.0
.138
.0
.001
.001
.232
.0
.0
.0
.002
.001
.018
.016
.006
.291
.997
.994
1.0
.162
.588
.4
.038
.22
.22
.03
.165
.608
.108
.018
--
--
--
--
--
--
--
--
.035
.005
.001
.006
.002
.004
.004
.011
.005
.0
.005
.0
.001
.361
.0
.002
.007
.118
.051
.004
.018
--
.001
.736
.492
.292
.258
.052
.109
.117
.014
.0
.016
.013
.379
.006
--
--
--
--
--
--
--
--
--
--
.839
.861
.906
.911
.081
.207
.31
--
--
--
--
.102
.177
.245
.318
.355
.246
.591
.3
.009
.013
.001
.0
.0
.001
.001
.002
.019
.329
.755
.171
--
--
--
--
--
--
--
--
--
.004
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Myo7b
Myo7b
Myo7b
Myo7b
Myo7b
Myo7b
Myo7b
Myo7b
Myo7b
Myo7b
Myo7b
Myo7b
Myo7b
Myo7b
Myo7b
Myo7b
Myo7b
Myo7b
Myo7b
Myo7b
Myo7b
Myo7b
Myo7b
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
T
G
G
T
C
C
T
C
C
C
G
T
G
C
G
A
T
C
C
T
A
G
T
G
C
T
3
T
A
C
G
C
C
A
T
T
G
C
A
T
A
G
C
T
A
C
T
A
G
A
T
T
C
C
C
A
A
A
C
G
T
C
C
C
C
C
3
G
T
G
A
G
G
A
G
C
C
C
A
A
T
T
G
A
T
T
G
C
T
C
C
A
G
A
T
G
A
A
6
10
A
C
A
G
G
C
T
C
G
C
A
G
A
G
T
C
C
G
A
A
T
G
A
4
C
A
C
A
C
C
C
C
C
T
T
T
A
11
A
A
T
T
A
T
G
4
G
G
C
T
G
T
T
C
A
T
A
T
A
G
G
2
C
C
C
T
6
T
C
G
G
4
C
4
A
A
T
G
C
C
A
4
A
A
A
T
4
2
A
A
A
A
G
G
C
T
T
C
C
2
A
G
G
A
G
A
A
A
G
A
A
A
T
T
T
G
G
T
A
T
4
3
C
C
G
4
2
A
C
  24,461,359
  24,461,636
  24,462,067
  24,462,541
  24,464,668
  24,464,670
  24,464,754
  24,464,758
  24,464,762
  24,464,793
  24,465,069
  24,465,084
  24,465,237
  24,465,507
  24,465,726
  24,466,540
  24,467,154
  24,467,629
  24,468,930
  24,469,976
  24,470,055
  24,470,073
  24,470,305
  24,472,308
  24,473,137
  24,473,170
  24,473,231
  24,473,590
  24,474,191
  24,474,307
  24,475,032
  24,475,114
  24,475,379
  24,475,423
  24,475,593
  24,475,787
  24,475,790
  24,476,096
  24,476,185
  24,476,301
  24,476,364
  24,476,677
  24,476,741
  24,476,764
  24,476,867
  24,477,594
  24,477,604
  24,478,122
  24,478,478
  24,478,939
  24,479,876
  24,481,119
  24,481,632
  24,481,756
  24,482,912
  24,483,117
  24,483,737
  24,483,865
  24,484,092
  24,484,413
  24,484,575
  24,484,634
  24,484,926
  24,485,047
  24,485,048
  24,485,197
  24,485,216
  24,485,296
  24,485,304
  24,485,667
  24,485,676
  24,485,727
  24,486,257
  24,486,471
  24,486,475
  24,486,543
  24,486,840
  24,486,913
  24,487,330
  24,487,434
  24,487,443
  24,487,528
  24,487,818
  24,487,916
  24,488,187
  24,488,189
  24,488,461
  24,488,757
  24,489,338
  24,489,431
  24,489,526
  24,489,940
  24,490,141
  24,490,147
  24,490,228
  24,490,269
  24,490,631
  24,490,637
  24,490,660
  24,490,682
  24,490,747
  24,490,751
  24,490,872
  24,491,001
  24,491,246
  24,491,325
  24,491,335
  24,491,358
  24,491,577
  24,491,619
  24,491,776
  24,491,919
  24,492,151
  24,492,200
  24,492,466
  24,492,882
  24,493,338
  24,494,120
  24,494,286
  24,494,454
  24,495,188
  24,495,466
  24,495,726
  24,496,970
  24,497,145
  24,497,346
  24,497,796
  24,497,998
  24,497,999
  24,498,191
  24,499,635
  24,499,854
  24,500,683
  24,500,755
  24,501,570
  24,501,890
  24,501,897
  24,501,990
  24,502,062
  24,502,657
  24,502,695
  24,502,700
  24,502,990
  24,503,429
  24,503,555
  24,503,567
  24,504,808
  24,505,032
  24,505,034
  24,505,329
  24,505,946
  24,506,295
  24,506,834
  24,506,884
  24,507,608
  24,508,902
  24,509,474
  24,510,080
  24,511,638
  24,512,274
  24,514,094
  24,514,487
  24,514,613
  24,514,787
  24,514,841
  24,516,032
  24,516,859
  24,516,880
  24,516,884
  24,517,781
  24,517,789
  24,517,792
  24,518,058
  24,518,750
  24,518,871
  24,518,875
  24,519,313
  24,519,357
  24,520,617
  24,520,633
  24,520,768
  24,520,924
  24,520,936
  24,520,940
  24,520,944
  24,521,052
  24,522,647
  24,522,649
  24,522,828
  24,522,830
  24,522,838
  24,522,840
  24,523,574
  24,524,193
  24,525,623
  24,527,499
  24,527,504
  24,527,603
  24,527,607
  24,528,468
  24,529,617
  24,529,813
  24,532,772
  24,533,061
  24,533,178
  24,534,605
  24,534,611
  24,534,617
  24,534,653
  24,534,688
  24,534,692
  24,534,696
  24,534,704
  24,534,708
  24,534,712
  24,535,181
  24,535,402
  24,535,830
  24,535,869
  24,535,956
  24,536,025
  24,536,100
  24,536,110
  24,536,121
  24,536,123
  24,536,214
  24,536,233
  24,536,234
  24,537,294
C
A
A
C
3
C/G
T/C
C/T
C/T
5
A
C
A
T
A
G
C
G
A
C
A/T
G/T
3
A
T
C
-
G
G
-
A
A
T
G
2
-
-
T
G
C
-
-
T
C
G
G
C
G
A
G
C
C
11
A
T
G
C
C
T
A
C
7
T
G
T
T
-
A
C
A
T
A
-
T
A
T
T
T
G
G
C
G
A
G
T/A
T/A
-
T
C
T
T
C
A
-
C
A
6/-
-/5
6/-
-
G
T
G
A
2
T
A
T
5
2
G
2
G
C
C
G
A
-
-
G
T/A
A
C
4/-
-
G
T
12
C/G
T
13
2
T
C
A
2
4
11/-
G
A/T
T/C
T/C
G
C
A
-
A
2
22
5
A
G
C
3
G
G
G
C
G
T
C
-
T
2
T
C
6/-
T/G
C/T
2
G/-
4/-
2
4/-
G
G
C
5
2
T
G
-
A/G
G
G
C
4/-
-
A/-
A/-
A/-
A/-
A
C
T
T/C
T/C
C/T
C/T
-
T
C
A
G
A
A/G
A/G
A/G
G/A
A/T
A/T
A/T
T/A
T/A
T/A
A
2
C
A/T
T/A
-
3/-
C/T
C/-
5
4/-
-
3
2