Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 133,179 (bp)   Positions: 48
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
FHH/EurMcwi (MCW) 
.036
.027
.014
.001
.002
.003
--
.047
.021
.017
.029
.045
--
--
--
.0
.168
.347
.023
.233
.001
.329
.008
.001
.008
.001
.31
.066
.094
.003
.023
.0
--
--
--
--
--
--
--
--
--
--
--
--
.045
.055
.068
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Mef2a
Mef2a
Mef2a
Mef2a
Mef2a
T
T
T
A
2
C
T
A
C
A
A
A
T
A
A
T
C
T
A
C
A
A
A
T
A
G
C
G
C
G
G
G
A
G
T
G
C
T
A
T
C
A
A
A
T
T
G
2
  129,277,788
  129,284,219
  129,288,649
  129,294,445
  129,294,446
  129,294,447
  129,302,771
  129,309,549
  129,309,552
  129,309,554
  129,309,561
  129,309,586
  129,309,597
  129,309,633
  129,309,648
  129,311,457
  129,312,478
  129,314,702
  129,316,827
  129,320,755
  129,320,962
  129,320,981
  129,320,997
  129,321,017
  129,321,595
  129,328,291
  129,328,301
  129,330,654
  129,334,737
  129,337,018
  129,350,885
  129,350,909
  129,374,412
  129,374,435
  129,374,672
  129,374,833
  129,374,851
  129,375,071
  129,375,168
  129,375,179
  129,375,240
  129,375,279
  129,375,425
  129,375,464
  129,378,086
  129,384,678
  129,384,679
  129,386,808
T/G
2
T/-
A/-
2/-
C/-
C
A/G
C/T
C
A/G
T
G
A/G
-
A
4
T/-
-
8
2
2
2
2
A/T
-
-
A
2
4
-
T
A/2
G/T
T/C
G/A
C/T
T/C
A/T
T/C
C/2
A/2
A/C
A/2
2
T/2
14
2/-