Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 23,190 (bp)   Positions: 133
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
MR/N (KNAW) 
.003
.004
.0
.003
.0
.041
.075
.034
.219
.003
.008
.019
.005
.038
.009
.013
.001
.001
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.039
.012
.066
.029
.007
.028
.34
.057
.022
--
.209
.004
.501
.237
.052
.216
.003
.053
.287
.009
.012
.01
.144
.997
.003
.0
.065
.03
.003
.018
.004
.002
.164
.007
.0
.698
.001
.021
.027
.813
.078
.001
.001
.019
.001
.002
.001
.002
.004
.037
.297
.131
.002
.143
.373
.079
.185
.588
.013
.023
.074
.086
.287
.375
.082
.048
.091
.024
.028
.016
.023
.048
.584
.02
.112
.072
.041
.001
.079
.068
.056
.015
.555
.027
.037
.046
.047
.056
.043
.041
.056
.017
Mcee
Mcee
Mcee
Mcee
Mcee
Mcee
Mcee
Mcee
Mcee
Mcee
Mcee
Mcee
Mcee
Mcee
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
A
T
T
C
A
C
T
T
G
G
C
C
T
G
C
G
A
6
A
T
A
T
T
C
G
G
G
G
T
C
C
C
G
A
C
T
A
A
C
T
C
A
A
G
T
T
A
T
T
A
G
A
T
C
C
A
A
C
T
A
A
T
A
C
T
T
A
A
T
A
G
T
A
C
T
G
A
A
A
A
G
G
C
G
C
T
T
A
A
A
G
A
T
G
C
A
T
A
A
G
T
A
T
G
G
C
A
A
A
C
T
C
A
T
T
T
G
A
G
C
G
C
A
T
C
A
C
G
C
C
C
A
T
  126,338,550
  126,338,570
  126,338,674
  126,338,770
  126,339,128
  126,339,195
  126,339,772
  126,339,894
  126,339,946
  126,340,122
  126,340,225
  126,340,404
  126,340,491
  126,340,523
  126,340,538
  126,340,550
  126,340,571
  126,340,575
  126,340,586
  126,340,628
  126,340,681
  126,340,691
  126,340,739
  126,340,787
  126,340,870
  126,340,907
  126,340,960
  126,341,211
  126,341,213
  126,341,241
  126,341,480
  126,341,486
  126,341,495
  126,341,507
  126,341,845
  126,341,998
  126,342,006
  126,342,007
  126,342,032
  126,342,118
  126,342,210
  126,343,044
  126,343,059
  126,343,082
  126,343,374
  126,343,412
  126,343,559
  126,343,783
  126,343,807
  126,343,820
  126,344,588
  126,344,945
  126,344,989
  126,345,378
  126,345,973
  126,346,034
  126,346,389
  126,346,461
  126,346,659
  126,347,454
  126,347,705
  126,347,718
  126,347,746
  126,347,952
  126,348,807
  126,348,943
  126,349,313
  126,349,950
  126,349,976
  126,350,108
  126,350,293
  126,350,300
  126,350,342
  126,350,454
  126,350,495
  126,350,513
  126,350,742
  126,350,793
  126,350,809
  126,350,958
  126,350,996
  126,351,321
  126,351,678
  126,351,743
  126,351,814
  126,351,820
  126,351,849
  126,351,852
  126,351,878
  126,351,884
  126,351,893
  126,351,904
  126,351,917
  126,352,014
  126,352,147
  126,352,398
  126,352,516
  126,352,535
  126,352,648
  126,352,733
  126,352,797
  126,352,841
  126,352,972
  126,353,051
  126,353,991
  126,354,037
  126,354,099
  126,354,114
  126,354,277
  126,355,006
  126,355,212
  126,356,006
  126,356,591
  126,357,291
  126,357,780
  126,357,821
  126,357,862
  126,358,276
  126,358,298
  126,358,410
  126,358,417
  126,359,118
  126,359,270
  126,359,476
  126,359,728
  126,359,736
  126,359,793
  126,360,043
  126,360,114
  126,360,120
  126,360,121
  126,360,136
  126,360,238
3
C
G
T
G
T
C
C
G/A
T
T
T
C
G/A
C/T
G/C
T
-
G
C
G
C
C
A
A
C
A
A
C
T
T
A
T
G
T
T/G
T
G
T
C
C/T
G
G
A
C
C
T
A
C
G
T
C
A
T
T
G
G
T
A
G
G
C
G
T
C
C
G
G
A
C
C
G
G
-
A
A
G
T
G
A/C
-
C
T
A
C/T
C
C
G
2
G
A
4
C
A
2
T
C
C
-
A
C
G
C
A
T
3
G
G
G
T
C
T
C
G
C
A
A
C
A
T
A
T
G
G
G
G
T
A
T
T
A
G
C