Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 64,444 (bp)   Positions: 100
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
COP/CrCrl (MCW & UW) 
.09
.029
.141
.159
.529
.002
.365
.285
.001
.001
--
.318
.003
--
--
.013
.073
.032
.057
.001
.0
.565
.065
.261
.059
--
--
--
.023
.009
.071
.12
.618
.002
--
--
--
--
--
--
.582
.008
.998
--
--
--
--
.318
.995
.932
.992
.046
.025
.31
--
--
--
--
.122
.0
.001
.001
.002
.185
.003
.001
.008
--
.005
.164
.001
.0
.863
.163
.022
.099
.072
.002
.026
.589
.616
.004
.061
.993
.986
--
--
.131
.119
.021
.185
.0
.001
.025
.064
.001
.152
.09
.091
.019
Map3k2
Map3k2
Map3k2
Map3k2
Map3k2
Map3k2
Map3k2
Map3k2
Map3k2
Map3k2
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
C
C
2
A
C
T
T
A
C
T
T
T
A
G
2
A
A
T
T
2
T
A
T
C
C
C
C
A
A
T
A
C
G
2
G
T
A
T
2
A
A
A
A
C
A
C
T
G
A
C
A
A
G
C
T
T
T
C
4
G
C
T
T
A
T
2
3
C
G
G
A
C
T
G
2
T
G
G
A
A
C
G
13
2
2
T
T
C
3
C
T
A
C
G
A
G
14
T
T
T
  24,676,446
  24,676,954
  24,677,177
  24,677,178
  24,677,198
  24,677,285
  24,677,747
  24,678,827
  24,679,243
  24,679,698
  24,681,087
  24,681,312
  24,681,772
  24,682,119
  24,682,165
  24,682,785
  24,683,107
  24,684,371
  24,684,569
  24,685,160
  24,685,161
  24,685,655
  24,685,739
  24,686,894
  24,687,665
  24,688,491
  24,688,492
  24,688,638
  24,690,042
  24,690,281
  24,692,413
  24,692,466
  24,692,827
  24,693,240
  24,693,828
  24,693,935
  24,694,520
  24,694,796
  24,695,203
  24,696,745
  24,698,070
  24,698,290
  24,698,475
  24,700,037
  24,700,082
  24,700,083
  24,700,151
  24,700,268
  24,702,093
  24,702,174
  24,702,625
  24,703,042
  24,703,071
  24,703,555
  24,705,061
  24,705,064
  24,705,067
  24,705,301
  24,706,679
  24,707,431
  24,708,216
  24,708,220
  24,708,222
  24,709,279
  24,709,628
  24,710,705
  24,710,871
  24,710,873
  24,712,056
  24,712,400
  24,715,435
  24,716,717
  24,717,328
  24,717,404
  24,717,770
  24,717,839
  24,721,526
  24,721,883
  24,723,214
  24,723,741
  24,725,687
  24,725,727
  24,725,885
  24,726,491
  24,726,721
  24,728,812
  24,729,131
  24,730,659
  24,730,679
  24,731,615
  24,732,598
  24,734,642
  24,734,700
  24,734,736
  24,735,070
  24,737,184
  24,737,616
  24,739,586
  24,739,621
  24,739,802
G
A
2/-
-
T
A
C
G
T
2
-
C
G
C
-
T
G
G
C
2/-
T/-
G
G
4
3
3
A
-
T
G
G
T
G/2
-
A
G
G
C
-
C
2
G
2
3
G
T
3
A
G
T
-
G
T
9
G
G
G
4/T
-
A
C/T
T/C
C
G
A
-
-
-
A
A
G
T
A
A
-
C
G/T
A
-
G
2
GT/3
-
2/-
2/-
C
T/2
T
-
T
C
G
T
A
C
A
-
C
6
A