Variant Visualizer (Variants)

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Sequence Annotation

Assembly Rnor_5.0

Conservation

Genes ( + )

Genes ( - )

Rnor 5.0

LE/Stm (Illumina) (KNAW)

.905	.914	.002	.538	.028	.558	.0	.031	.0	.79	.799	.995	.995	.0	.014	.004	.005	--	.123	.0	.001	.0	.001	.0	.003	.001	.029	.002	.001	.0	.045	.104	.157	.156	.976	.004	.001	.0	.035	.1	.604	.002	.0	.073	.929	.85	.188	.002	.214	.21	.283	.11	.002	.0	--	.113	--	--	--	.029	.001	.028	.003	.001	.91	.046	.56	.19	.001	.002	.002	.002	.001	.0	.002	.006	.001	.001	.0	.069	.002	.003	.402	.776	.0	.0	--	.088	.085	.003	.008	.0	.004	.03	--	.043	.002	.005	.006	.011	.059	.06	.091	.094	.08	.705	.002	.002	.046	.006	--	1.0	.001	.001	.002	.0	.003	.013	.042	.892	.006	.001	.001	.97	1.0	.004	.001	.0	.002	.014	.016	.006	.001	.001	.002	.018	.212	.003	.005	.036	.038	.134	.005	.041	.015	.013	.025	--	--	.074	.092	.0	.006	.0	.005	.031	.0	.001	.244	.006	.179	.068	.22	.746	.0	.001	.006	.001	.0	.004	--	--	--	.0	.005	--	.01	.001	.064	.047	.001	.002	.002	.318	.659	.136	.011	--	.165	.047	.742	.274	.001	.066	.072	.097	.158	.176	.181	.168	.007	--	.052	.002	.906	.856	.005	.019	.694	.333	.091	.011	.006	.007	.305	.087	.079	.001	.002	.0	.006	.247	.006	.0	.0	.0	.786	.0	.0	.0	.001	.074	.016	.064	.001	.024	--	--	.007	.186	.818	.098	.993	.232	.161	.471	.121	.001	.02	.239	.966	.0	.0	.589	.002	.01	.004	.011	.011	--	.009	.0	--	--	--	--	--	--	.088	.756	.001	.017	.039	.0	.035	.017	.005	.137	.145	.025	.004	.105	.003	.332	.705	.0	.0	.0	.001	.018	.0	.004	.195	.147	.014	.05	.003	--	.083	.004	.027	.06	--	.003	.037	.535	.573	.042	.282	.6	.009	.001	.0	.001	.009	.16	.0	.003	.002	.0	.003	.001	.7	.525	.868	.001	.021	.259	.079	.023	.001	.299	.038	.304	.143	.032	.023	.015	.012	.495	.002	.006	.0	.02	.322	.104	.0	.001	.0	.002	.214	.003	.005	.042	.002	.627	.997	.003	.002	.042	.462	.306	.0	.001	.029	.0	.0	.372	.0	.056	.101	.394	.423	.006	.001	.045	.0	.001	.003	.003	.63	.021	.001	.0	.033	.0	.009	.034	.404	.065	.071	.064	.002	.003	.158	.001	.001	.0	.005	.0	.002	.011	.004	.001	.0	.055	.223	.212	.0	.972	.002	.004	.024	.001	.034	.006	.11	.002	.001	.113	.114	.012	.005	.022	.012	.053	.07	.004	.041	.112	.117	.119	.002	1.0	1.0	.155	.0	.017	.079	.071	.072	.299	.021	.02	.035	.0	.004	.006	.004	.001	.002	.04	.319	.059	.002	.04	.061	.002	.01	.051	.525	.963	.923	.001	.019	.735	.0	.006	--	--	--	.001	.001	.004	.0	.016	.0	.0	.106	.102	.002	.021	.69	.001	.045	.223	.003	.001	.003	.004	.0	.0	.002	.001	.013	.003	.004	.049	.001	.001	.06	.001	.0	.004	.005	.0	.004	.051	.0	.012	.745	.984	.001	.002	.005	.0	.01	.0	.001	.255	.004	.003	.022	.004	.329	.1	.025	.0	.019	.46	.176	.03	.014	.099	.09	.008	.998	.203	.009	.271	.708	.085	.008	.05	.057	.015	.005	.015	.008	.471	.759	.057	.013	.022	.0	.011	.002	.269	.005	.284	.262	.192	.236	.858	.0	.046	.003	.002	.042	.407	.441	.007	.091	.018	.036	.038	.006	.005	.0	.008	.004	--	--	.18	.167	.033	.084	.003	.011	.008	.003	.149	.001	.059	.001	.023	.0	.071	.393	.001	.001	.841	.001	.049	.168
--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--	--
--	--	--	--	--	--	--	--	--	--	Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3										Maml3
A	G	T	T	T	A	A	T	C	6	3	A	C	G	A	A	A	16	T	C	T	C	C	G	G	T	T	C	A	A	G	G	6	4	A	A	G	A	A	G	T	G	T	5	G	T	G	A	2	A	G	T	A	C	G	C	T	C	T	C	A	G	A	A	T	T	G	A	C	G	C	T	T	G	G	C	G	2	C	8	G	G	T	2	A	T	A	C	G	T	G	10	G	G	G	T	C	2	C	G	C	T	G	A	T	12	T	A	A	G	T	T	T	C	G	T	C	A	T	G	G	T	T	5	T	C	A	C	4	T	A	A	A	A	G	T	4	T	G	T	G	T	A	A	C	G	C	G	G	G	C	2	11	G	C	36	G	G	A	A	G	T	G	T	G	G	T	C	A	T	G	4	T	C	2	2	G	T	A	T	T	C	G	5	C	G	G	A	2	A	T	C	T	8	G	2	G	G	2	5	A	T	T	G	T	C	C	G	G	T	A	G	C	T	C	C	A	A	C	A	T	T	A	A	A	A	A	T	C	T	A	G	G	T	G	C	T	A	G	2	28	G	T	T	C	T	C	G	A	A	C	G	C	A	C	C	G	2	A	A	C	G	T	T	28	2	T	A	G	A	G	T	C	2	A	C	G	A	9	T	A	T	T	G	A	C	C	C	C	T	A	C	G	A	A	A	C	T	T	2	A	A	6	G	G	C	C	C	T	4	A	C	C	T	G	A	C	A	C	T	T	10	T	A	G	G	2	T	T	A	G	A	C	2	C	A	A	C	16	G	G	G	T	T	G	4	A	A	A	T	T	C	4	A	T	C	A	G	A	C	A	G	T	C	G	G	T	T	T	8	T	T	A	A	T	T	G	C	A	C	C	A	G	T	6	A	T	G	T	2	C	6	C	A	T	T	A	T	G	C	A	10	2	C	T	2	4	G	C	T	G	C	C	G	A	G	T	T	C	G	C	C	T	A	28	C	C	C	A	G	G	T	T	A	C	4	11	C	T	T	G	A	T	C	C	G	G	G	A	A	C	G	G	T	T	G	A	T	T	G	A	C	G	C	8	A	C	T	G	G	A	G	C	C	T	T	A	A	T	T	G	T	G	C	G	C	A	C	C	C	C	C	A	T	G	T	A	G	G	C	A	G	T	G	T	A	A	A	C	30	C	T	G	G	C	A	G	A	T	A	T	T	G	G	T	G	T	T	T	T	G	T	G	T	G	T	A	A	25	C	T	C	A	T	A	A	A	A	2	G	T	C	T	C	A	C	T	A	T	T	T	T	C	A	G	A	G	C	A	G	T	A	A	C	12	10	A	A	G	A	G	C	T	T	A	2	A	C	G	A	A	T	G	G	A	5	T	3	A	A	T	A	C	C	A
160,209,908	160,209,909	160,210,915	160,211,344	160,211,503	160,211,967	160,212,329	160,213,343	160,217,601	160,217,729	160,716,886	160,717,687	160,717,930	160,717,991	160,718,300	160,719,261	160,719,471	160,719,996	160,720,078	160,721,179	160,721,558	160,721,611	160,722,183	160,722,548	160,722,862	160,722,880	160,723,285	160,724,241	160,726,133	160,726,495	160,726,595	160,726,985	160,728,520	160,728,522	160,728,911	160,734,712	160,734,716	160,738,329	160,739,273	160,739,590	160,740,448	160,740,496	160,740,501	160,740,653	160,741,111	160,741,147	160,741,192	160,742,584	160,744,277	160,744,278	160,744,382	160,744,393	160,744,868	160,749,145	160,751,298	160,752,210	160,753,148	160,753,162	160,753,165	160,753,835	160,754,112	160,754,774	160,755,156	160,755,300	160,755,560	160,756,135	160,756,614	160,757,880	160,758,447	160,758,874	160,759,679	160,759,939	160,761,226	160,761,229	160,761,309	160,761,538	160,761,869	160,761,984	160,762,089	160,763,736	160,764,201	160,764,849	160,765,535	160,766,360	160,767,723	160,769,413	160,770,384	160,770,518	160,770,909	160,771,494	160,772,417	160,772,478	160,773,740	160,775,169	160,775,233	160,775,849	160,777,599	160,777,672	160,777,682	160,778,476	160,780,063	160,780,064	160,780,464	160,780,891	160,781,515	160,782,545	160,783,090	160,783,526	160,784,007	160,784,619	160,784,728	160,785,364	160,786,277	160,786,446	160,786,543	160,787,174	160,787,229	160,787,562	160,787,577	160,787,663	160,787,911	160,787,936	160,787,939	160,788,027	160,788,191	160,788,335	160,788,447	160,788,451	160,788,495	160,788,564	160,788,567	160,788,962	160,789,190	160,789,230	160,789,524	160,790,170	160,790,391	160,790,921	160,791,589	160,791,793	160,791,794	160,791,843	160,791,876	160,792,384	160,792,727	160,793,459	160,793,663	160,793,964	160,793,970	160,794,679	160,794,768	160,795,093	160,795,446	160,795,850	160,796,497	160,796,607	160,797,082	160,797,206	160,797,849	160,798,235	160,799,219	160,799,226	160,800,020	160,800,095	160,800,502	160,800,506	160,800,514	160,801,267	160,801,517	160,801,747	160,802,064	160,802,069	160,802,204	160,802,419	160,802,548	160,802,868	160,803,279	160,803,534	160,803,983	160,803,991	160,804,026	160,804,436	160,804,483	160,804,578	160,804,613	160,804,731	160,804,891	160,805,272	160,805,390	160,805,423	160,805,636	160,806,120	160,806,489	160,807,124	160,807,141	160,807,210	160,807,225	160,807,233	160,807,254	160,807,262	160,807,754	160,808,503	160,809,101	160,809,522	160,810,203	160,810,211	160,810,244	160,810,474	160,810,686	160,810,710	160,811,117	160,811,318	160,811,400	160,811,752	160,811,872	160,812,516	160,812,527	160,813,065	160,813,100	160,813,308	160,813,396	160,813,415	160,813,594	160,813,808	160,813,900	160,813,942	160,814,357	160,814,464	160,814,555	160,814,683	160,815,008	160,815,554	160,815,617	160,815,955	160,816,243	160,816,620	160,817,125	160,817,491	160,817,651	160,817,707	160,819,622	160,819,970	160,820,611	160,822,536	160,822,681	160,822,709	160,823,402	160,823,429	160,824,873	160,825,560	160,825,647	160,825,813	160,825,837	160,826,130	160,826,304	160,826,339	160,826,437	160,826,496	160,826,590	160,826,614	160,826,976	160,827,626	160,828,243	160,828,247	160,828,314	160,828,392	160,828,663	160,828,740	160,829,237	160,829,611	160,829,777	160,830,691	160,830,692	160,830,710	160,831,173	160,831,216	160,831,218	160,831,302	160,832,213	160,832,223	160,832,765	160,832,979	160,833,102	160,833,567	160,834,418	160,834,505	160,834,582	160,834,766	160,834,878	160,835,020	160,836,060	160,836,361	160,836,442	160,836,656	160,839,871	160,840,400	160,841,143	160,841,151	160,842,866	160,846,361	160,848,383	160,851,289	160,852,064	160,853,378	160,853,404	160,858,565	160,858,843	160,858,918	160,859,207	160,859,464	160,859,583	160,859,587	160,859,824	160,860,114	160,860,185	160,860,273	160,860,371	160,862,045	160,862,310	160,862,604	160,863,195	160,863,268	160,863,947	160,864,116	160,864,120	160,864,679	160,864,827	160,865,203	160,865,221	160,865,261	160,866,476	160,867,241	160,870,155	160,871,666	160,871,688	160,871,867	160,871,921	160,871,922	160,872,138	160,872,388	160,872,633	160,872,876	160,872,925	160,873,816	160,873,925	160,874,932	160,879,466	160,879,529	160,879,815	160,880,844	160,880,914	160,880,948	160,881,390	160,882,026	160,882,228	160,882,704	160,883,314	160,883,942	160,884,128	160,884,426	160,885,488	160,885,618	160,885,705	160,886,067	160,886,269	160,886,828	160,886,904	160,887,431	160,887,710	160,890,297	160,890,493	160,890,505	160,890,515	160,890,541	160,890,746	160,893,860	160,894,446	160,894,452	160,894,454	160,894,777	160,894,982	160,895,540	160,895,870	160,897,638	160,898,836	160,898,894	160,899,978	160,899,999	160,900,195	160,900,233	160,900,240	160,900,273	160,901,154	160,901,156	160,901,389	160,902,766	160,902,921	160,903,598	160,903,689	160,903,803	160,904,237	160,904,446	160,904,454	160,905,269	160,905,277	160,905,284	160,905,300	160,905,665	160,905,741	160,906,025	160,906,246	160,906,553	160,906,848	160,907,606	160,908,331	160,908,409	160,909,275	160,910,187	160,910,297	160,910,492	160,910,853	160,913,915	160,914,241	160,915,341	160,918,119	160,918,175	160,918,551	160,918,719	160,920,377	160,920,392	160,920,395	160,920,397	160,921,889	160,922,498	160,922,749	160,922,928	160,923,232	160,923,644	160,924,203	160,924,204	160,924,205	160,924,279	160,924,546	160,924,839	160,925,361	160,925,681	160,926,066	160,926,312	160,926,729	160,926,763	160,927,217	160,927,838	160,927,919	160,928,183	160,928,700	160,929,065	160,929,367	160,929,591	160,930,047	160,930,329	160,930,342	160,930,556	160,930,565	160,930,805	160,930,834	160,931,283	160,931,353	160,931,502	160,931,681	160,931,968	160,932,012	160,932,389	160,932,638	160,932,751	160,932,789	160,932,894	160,932,941	160,933,250	160,933,565	160,933,733	160,933,741	160,934,075	160,934,167	160,934,519	160,934,904	160,935,354	160,935,651	160,935,917	160,936,380	160,936,760	160,936,769	160,936,864	160,937,011	160,937,027	160,937,235	160,937,705	160,937,805	160,937,852	160,938,014	160,938,027	160,938,040	160,938,048	160,938,049	160,938,174	160,938,384	160,938,725	160,939,132	160,939,141	160,939,598	160,939,886	160,939,961	160,940,039	160,940,634	160,940,779	160,940,832	160,941,826	160,941,917	160,942,032	160,942,187	160,942,430	160,942,818	160,943,259	160,943,677	160,943,688	160,943,859	160,943,878	160,943,984	160,944,710	160,944,774	160,944,965	160,945,044	160,945,111	160,945,495	160,945,837	160,945,838	160,945,869	160,946,264	160,946,435	160,946,518	160,947,114	160,947,204	160,947,492	160,947,507	160,947,949	160,947,951	160,948,217	160,948,513	160,948,612	160,948,616	160,948,702	160,948,816	160,949,001	160,949,214	160,949,216	160,949,563	160,949,829	160,950,265	160,951,033	160,951,563	160,952,163	160,952,164	160,952,189	160,952,192	160,952,367	160,952,682	160,953,356	160,953,566	160,954,079	160,954,224	160,954,278	160,954,292	160,954,439	160,954,532	160,954,604	160,954,761	160,954,763	160,954,781	160,954,974	160,955,043	160,955,628	160,956,004	160,956,377	160,956,430	160,956,827	160,956,829	160,957,060	160,958,102	160,958,370	160,958,679	160,958,681	160,958,878	160,959,302	160,960,163	160,960,180	160,960,309	160,960,983	160,961,587	160,961,623	160,961,667	160,961,713	160,962,394	160,963,570	160,963,918	160,965,311	160,965,387
3	T	-	C	2	G	G	C	2	-	-	G	A	A	T	G	G	-	-	T	C	T	T	A	C	G	3	A	A/2	G	A	2	6/-	-	G	-	2	G	G	A	C	A	C	-	T	5	-	2	2/-	-	T	-	G	2	2	2	T/-	C/5	T/3	T	G	-	G	G	-	C	A	C	T	A	2	T/3	G	-	A	T	A	-	A	8/-	5	G/-	C	-	2	C	G	T	A	TA/3	7	-	A	5	19	C	3	-	G	A	T	C	-	G	C	-	11	T	G	T	-	A	C	2	A	C	T	G	C	A	5/3	G	A	-	C	A	G	-	-	C	G	G	C	G	C	C	-	C	A	C	A	-	2	G	T	2	T	A	G/3	A	16	-	-	-	T	-	A	A	G	G	A	C	A	5	11	-	-	T	G	C	-	4/-	2	T	-	-	C	C	G	G	3/5	G	A	-	T	A	T	T	-	G	A	A	C	-	C	-	3	C	-	-	G	A	C	A	C	9	T	A	A	C	G	C	T	2	T	T	G	C	T	C	G	C	C	G	G	G	C	C	T	C	T	A	A	G	T	T	C	G	A	-	-	A	C	5	3	T/9	A	A	T	G	6	A	T	G	17	5	C	-	A/G	A/34	2	A	-	4	-	-	G	T	T	G	A	C	4	-	G	T	A	G	-	G	C	-	C	2	T	T	T	T	A	C	C	10	A	G	G	-	G	5	A	2/-	7	C	-	A	-	T	T	T	C	-	-	6	T	C	A	G	T	G	T	4	TC/3	-	T/A	G	-	A	-	9	3/15	2	A	G	T	-	2	3	C	A	-	A	T	A	C	9	A	-	G	C	G	A	2	T	4/-	T	C	T	C	-	G	2	G	A	C	3	A	C	G	C	G	8/-	C	C	G	-	C	C	5	2	38	2	2	G	A	C	-	G	C	2	G	-	G	-	T	C	C	G	G	A	C	4	G	10/-	2/-	2	2	-	-	4	T	A	A	T	T	C	G	A	A	A	T	A	4	T	T/-	G	-	T	2	T	T	T	T	G	4	-	T	-	-	T	5	2	2	G	14	T	T	A	A	C	G	C	T	G/3	A	C	A	A	G	C	G	A	G	T	A	G	-	G	T	G	C	C	A/G	A	A	2	C	C	G	C	7	7	G/C	2	C	T	A	5	3	2	2	T	T	T	G	G	A	C	5	A	A	T	-	A	A	A	C	C	2	8/16	T	-	G	2	A	A	T	G	2	G	C	A/5	C	C	-	T	C	A	C	C	A	23	A	C	A	C	A	C	2	G	-	T	C	T	G	3	G	5	G	G	-	A	17	A	C	A	T	T	G	7	C	G	A	C	T	G	A	G	4	T	G	A	9/3	G	G	T	12/-	10/-	C	G	A	G	C	T	C	T/8	A/-	-	G	T	A	T	G	A	A	A	G	-	C	-	G	G	C	-	3	9	G