Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 27,923 (bp)   Positions: 95
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
SS/JrHsdMcwi (KNAW) 
.045
--
.31
.864
.002
--
--
--
--
.201
.165
.008
.018
.362
.827
.063
.049
.041
.008
--
--
.962
.997
.997
.995
.561
.534
--
.0
.064
.006
.07
.007
.034
.015
.0
.144
.072
.0
.006
.075
.542
.582
.151
.028
.658
.5
.328
.316
.285
.745
.123
.462
.005
.079
--
.049
.117
.153
.0
.001
.143
.513
.03
--
.23
.065
.053
.001
--
.004
--
.72
.004
.006
.002
.19
.036
.06
.156
.204
.222
.037
.017
.336
.038
.142
.393
.0
.93
.0
.001
.004
.004
.026
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
LOC102552690
LOC102552690
LOC102552690
LOC102552690
LOC102552690
LOC102552690
LOC102552690
LOC102552690
LOC102552690
LOC102552690
G
G
C
G
T
T
A
T
A
G
G
10
T
C
C
3
C
C
G
G
A
C
4
24
20
A
A
A
T
A
G
A
T
G
4
C
G
T
C
C
G
T
2
T
T
T
T
2
G
G
G
A
A
6
A
2
5
3
G
T
G
G
24
T
T
G
T
G
C
G
C
4
T
A
T
C
C
A
A
15
G
G
T
A
C
C
A
G
A
G
A
G
C
G
C
  39,829,606
  39,829,743
  39,830,138
  39,830,895
  39,831,596
  39,833,157
  39,833,168
  39,833,169
  39,833,200
  39,833,653
  39,833,714
  39,833,903
  39,834,022
  39,834,648
  39,835,054
  39,835,124
  39,835,127
  39,835,130
  39,835,339
  39,836,263
  39,836,443
  39,836,691
  39,836,724
  39,836,740
  39,836,744
  39,836,801
  39,836,802
  39,837,253
  39,839,042
  39,839,301
  39,839,373
  39,839,429
  39,839,989
  39,840,196
  39,840,279
  39,840,813
  39,840,990
  39,841,104
  39,841,115
  39,841,295
  39,841,570
  39,841,625
  39,842,311
  39,842,390
  39,842,635
  39,842,769
  39,842,784
  39,843,123
  39,843,124
  39,843,126
  39,843,469
  39,843,520
  39,844,176
  39,844,249
  39,844,540
  39,844,629
  39,845,056
  39,845,650
  39,845,722
  39,846,378
  39,846,572
  39,846,664
  39,847,407
  39,847,772
  39,847,831
  39,847,903
  39,848,418
  39,848,529
  39,849,052
  39,849,459
  39,849,635
  39,850,872
  39,850,997
  39,851,074
  39,851,397
  39,851,918
  39,852,122
  39,852,508
  39,852,513
  39,852,827
  39,852,925
  39,853,168
  39,853,205
  39,853,337
  39,853,465
  39,854,026
  39,854,289
  39,854,445
  39,854,554
  39,854,999
  39,855,071
  39,855,379
  39,855,470
  39,855,520
  39,855,916
A
A
T
A
C
T/4
G
C
13
A
2
-
C
T
T
-
5
A
A
2
G
T
-
-
20/-
T
-
G
G
G
A
G
A
A
-
T
3
C
G
T
A
C
2/-
3
C
-
C
-
5
A
A
G
G
-
2
-
-
-
A
C
A
A
-
-
C
13/11
G
A
T
A
T
-
C
T
A
2
G
G
C
-
T
A
A
T
T
-
G
A
C
A
G
C
T
A
T