Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 380,289 (bp)   Positions: 94
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
WKY/NHsd (KNAW) 
.0
--
.542
.238
--
--
--
.046
--
--
--
.206
.009
.018
.064
.023
.004
.042
.034
.023
.008
.037
.009
.074
.079
--
--
--
--
--
--
.201
.015
.002
--
--
--
--
--
--
--
--
--
--
--
.172
.21
.0
.0
.0
.0
.0
.0
.164
.291
.001
.001
--
--
--
.006
--
.002
.0
.268
.001
.005
.746
.006
.015
.003
.078
.01
.004
--
--
.457
.009
.043
.078
.005
.257
.084
.005
.017
--
.023
--
--
.017
.001
.3
.022
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Ksr2
Ksr2
Ksr2
Ksr2
Ksr2
Ksr2
Ksr2
Ksr2
Ksr2
Ksr2
2
A
A
C
C
G
A
G
T
C
4
2
G
A
C
C
C
3
3
T
T
2
A
G
C
C
G
G
C
G
G
A
A
A
3
C
A
A
T
5
T
G
G
C
A
3
2
G
G
G
G
G
C
G
A
2
4
G
G
A
2
G
G
2
2
C
A
2
G
C
G
4
C
C
C
2
4
2
C
A
A
A
A
A
A
A
89
G
G
G
8
A
T
A
  46,361,675
  46,374,101
  46,376,157
  46,382,050
  46,385,776
  46,428,281
  46,428,286
  46,441,741
  46,446,051
  46,446,081
  46,463,401
  46,473,010
  46,473,972
  46,483,281
  46,483,311
  46,485,108
  46,485,134
  46,485,237
  46,500,001
  46,500,025
  46,500,043
  46,500,092
  46,501,080
  46,501,883
  46,501,884
  46,502,888
  46,502,890
  46,502,892
  46,502,910
  46,502,918
  46,517,883
  46,524,904
  46,531,359
  46,532,132
  46,551,774
  46,551,845
  46,551,846
  46,551,933
  46,551,961
  46,552,161
  46,552,227
  46,552,269
  46,552,289
  46,552,447
  46,552,485
  46,554,623
  46,570,488
  46,571,280
  46,571,281
  46,571,284
  46,571,286
  46,571,287
  46,571,296
  46,575,400
  46,576,990
  46,578,225
  46,588,561
  46,591,736
  46,591,740
  46,596,157
  46,603,919
  46,611,239
  46,620,196
  46,636,061
  46,636,952
  46,637,564
  46,637,790
  46,643,425
  46,644,965
  46,644,993
  46,645,022
  46,645,068
  46,645,074
  46,645,105
  46,645,120
  46,648,189
  46,649,759
  46,651,321
  46,651,938
  46,651,944
  46,654,127
  46,654,131
  46,657,092
  46,667,936
  46,672,223
  46,674,541
  46,676,022
  46,677,086
  46,679,670
  46,692,542
  46,696,195
  46,700,186
  46,702,133
  46,714,797
2/-
G
2
C/T
2
3
2
T
C
136
4/-
-
G/-
3
-
T
G
-
-
-
A
-
3
2
T
G
C
C
G
3
2
A/-
A/-
49
3/-
T
G
G
-
5/-
C
9
A
G
G
3/-
2/-
A
T
T
A
T
G
G/9
A/2
2/-
-
2
2
2
2/-
G/3
A
-
-
C/-
A/-
2/-
T
T
C
-
G
T
G
-
4/-
2/-
C/2
A/G
-
2
A/-
A/-
A/-
A/3
-
G/2
-
2
8/-
A/-
T/-
-