Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 57,684 (bp)   Positions: 85
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
SHR/NHsd (KNAW) 
.873
.837
.001
.522
.898
1.0
.034
.001
.0
.104
.028
.257
.425
.857
--
--
--
--
--
--
--
.031
--
--
.704
.731
--
--
.047
.007
--
--
.906
.412
.007
.116
--
--
--
--
--
--
.042
.179
.786
.308
.025
--
.022
.001
.002
.009
.705
.736
.284
.411
.003
.073
--
--
--
--
--
--
--
--
.738
.157
.019
.01
.035
.001
.001
.017
.02
.004
.029
.01
.011
.011
.018
.976
.214
.993
.332
Klhdc10
Klhdc10
Klhdc10
Klhdc10
Klhdc10
Klhdc10
Klhdc10
Klhdc10
Klhdc10
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
G
A
A
T
G
A
G
2
C
6
G
24
T
T
C
2
T
14
C
C
T
T
2
G
4
2
T
C
G
T
C
T
T
T
C
T
T
T
A
G
C
36
G
A
C
G
G
T
T
A
G
C
2
G
T
8
C
T
4
T
A
C
G
T
G
A
A
A
10
C
A
8
6
T
G
G
A
T
A
A
C
9
A
C
T
  57,478,283
  57,478,284
  57,478,348
  57,478,780
  57,478,833
  57,479,512
  57,479,570
  57,479,847
  57,479,848
  57,480,464
  57,481,036
  57,482,250
  57,482,704
  57,483,677
  57,484,177
  57,484,178
  57,484,179
  57,484,796
  57,485,477
  57,487,255
  57,487,477
  57,487,947
  57,489,062
  57,489,083
  57,489,444
  57,489,446
  57,490,463
  57,490,557
  57,491,902
  57,492,352
  57,493,340
  57,493,416
  57,493,744
  57,494,572
  57,494,999
  57,496,232
  57,498,199
  57,498,935
  57,499,550
  57,499,610
  57,499,720
  57,500,839
  57,501,412
  57,501,591
  57,501,820
  57,502,669
  57,502,788
  57,508,552
  57,508,952
  57,509,519
  57,509,520
  57,509,641
  57,509,732
  57,509,733
  57,510,223
  57,510,995
  57,511,579
  57,511,726
  57,512,273
  57,512,411
  57,512,593
  57,512,914
  57,513,382
  57,513,383
  57,513,442
  57,513,443
  57,515,035
  57,515,680
  57,516,186
  57,518,196
  57,518,248
  57,522,801
  57,522,803
  57,523,307
  57,524,445
  57,524,727
  57,525,441
  57,525,494
  57,525,495
  57,525,497
  57,525,500
  57,527,464
  57,530,480
  57,533,296
  57,535,047
G/2
A/-
3
C
2
G
C
2/-
C/-
-
C
-
C
C
C/2
2/-
T/-
14/-
T
C/3
G
C
-
5
4/-
2/-
7
3
A
C
2
T/-
126
-
T
C
3/3
C
G
A
C/13
-
5/7
G
3
A
A
-
5
G
T
2
2/-
G/3
C
-
4/CT
A
-
C
3
A
3
18
G/2
A/-
-
G
-
-
G
8/-
6/-
3
2
2
7
5
T
C
2
-
T
T
C