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  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 183,056 (bp)   Positions: 552
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
F344/NRrrc (SOLiD) (KNAW) 
.001
.011
.001
.0
.074
.035
.0
.826
.985
.987
.944
.049
.005
.055
.008
.009
.01
.062
--
--
--
--
.361
.001
.003
.002
.013
.006
.019
--
--
--
--
--
--
--
--
.068
.047
--
--
--
--
--
--
--
.018
.0
.026
.004
.006
.097
--
.706
.045
.248
.001
.0
.0
.241
.0
.0
.0
.034
.121
.721
.999
.106
.0
.0
.0
.119
.056
.002
.015
.071
.081
.133
.203
.007
.001
--
--
.267
.0
--
--
--
--
--
--
.008
.085
.986
.044
.003
.066
.249
.519
.056
.006
.171
.001
.054
.041
.149
1.0
.072
.01
.016
.007
.024
.051
.045
--
.132
.03
.023
.024
.257
.092
.053
.03
.009
.155
.043
.101
.239
.14
.119
.341
.504
.659
.006
.073
.007
.003
.002
.354
.031
.043
.037
.018
.012
.006
.31
.08
.359
.336
.233
.153
.178
.185
.061
.02
.005
.032
.004
.002
.049
.098
.16
.009
.164
.024
.095
.0
.142
.001
.001
.004
.61
.619
.016
.044
.017
.09
.171
.001
.0
.981
.008
.004
.055
.003
.005
.001
.002
.007
.003
.107
.034
.177
.0
.0
.0
.028
.12
.019
.033
.182
.174
.001
.015
.05
.044
--
--
.04
.956
.054
.001
.0
.993
.0
.015
.0
.099
.006
.002
.001
.088
--
--
.137
.004
.998
.001
.001
.003
.002
.046
.207
.054
--
--
.014
.019
.011
.001
.011
.017
.081
.004
.008
.033
.005
.006
.054
.042
.016
.018
.0
.027
.0
.002
.027
.074
.025
.181
.566
.496
.031
.002
.005
.007
.002
.0
.001
.122
.094
.214
.176
.14
.004
.072
.322
.036
.007
.01
.02
.031
.025
.015
.033
.01
.0
.0
.713
.0
.002
.001
.008
.006
.002
.0
.0
.004
.004
.003
.002
--
.018
.046
.913
.003
.004
.005
.141
.017
.032
.028
.035
.047
.002
.005
.068
.072
.002
.016
.005
.997
.013
.02
.042
.026
.188
.018
.005
.519
.102
.013
.002
.002
.001
.003
.007
.094
.082
.012
.01
.001
.0
.001
.0
.002
.269
.0
.008
.0
.001
.026
.029
--
.0
.004
.004
.001
.051
.377
.007
.0
.004
.008
.002
.002
.012
--
.048
.046
.128
.0
.0
.0
.067
.003
.008
.013
.0
.004
.0
.003
.142
.001
.022
.282
.102
.002
.003
.0
.003
.066
.07
.042
1.0
.026
.0
.002
.19
.5
.005
.001
.0
.003
.0
.006
.008
.004
.027
.717
.068
.049
.046
.009
.338
--
.009
.076
.032
.012
.004
.014
.006
.003
.168
.231
.0
.001
.012
.0
.0
.002
.007
--
.015
.029
.013
.0
--
.071
--
--
--
--
--
.005
.095
.001
.083
.47
.024
.0
.578
.004
.004
.003
.223
.013
.002
.002
.018
--
.001
--
.001
--
--
.004
.007
.046
.004
.0
.002
.0
.008
.0
--
.003
.0
.002
.15
.172
.245
--
.006
.08
.002
.0
.0
.006
.014
.011
.015
.0
.006
.066
.0
.009
.001
.0
.008
.001
.0
.005
.322
.004
.002
.019
.001
.001
.009
.02
.002
.104
.001
.001
.085
.006
.068
.008
.611
.176
.071
.008
.0
.347
.714
.0
.034
.004
.009
.0
.0
.62
.8
.852
.197
.01
.004
.119
.004
--
--
.055
.057
.086
.14
.0
.001
.0
.998
.032
--
--
--
--
--
--
--
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--
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
Kif13a
C
3
C
G
C
T
A
G
A
A
A
G
A
G
G
T
T
C
A
A
T
T
T
A
A
T
T
T
T
A
G
T
5
A
A
A
A
C
T
T
C
A
T
G
T
G
T
A
A
C
G
C
C
C
G
G
C
T
T
G
C
C
C
G
T
C
A
G
G
5
G
G
T
A
G
T
T
C
T
G
T
C
A
G
C
A
C
C
A
C
T
G
T
C
2
C
C
5
A
T
T
G
G
T
C
C
A
T
T
A
C
T
A
T
C
G
T
A
A
T
G
4
C
T
T
A
C
A
C
C
T
T
T
C
G
T
C
T
A
C
G
C
C
C
C
T
A
G
T
A
T
T
C
C
T
G
A
T
T
2
G
T
G
2
A
G
G
C
T
C
C
C
A
T
T
C
T
A
C
A
C
C
A
G
C
T
G
A
A
T
C
G
T
A
A
C
A
T
G
G
C
11
C
C
C
4
A
T
A
T
A
T
A
A
T
C
G
C
T
G
T
T
G
A
A
G
G
T
C
T
G
A
A
C
A
T
C
G
T
A
T
T
T
A
T
T
A
G
C
T
A
T
C
C
C
C
G
A
C
T
T
A
C
G
C
4
G
24
C
T
A
T
G
T
C
G
T
C
T
T
C
G
G
G
C
G
G
G
6
T
C
T
C
T
C
C
A
T
T
T
G
G
C
T
A
A
T
G
G
T
G
5
A
C
T
C
C
G
G
A
G
G
T
T
G
T
16
G
2
A
T
G
C
T
G
G
T
T
G
G
C
T
A
A
A
C
10
G
T
T
T
T
T
C
31
A
G
T
C
A
C
C
C
G
A
C
A
C
A
C
G
T
A
T
T
G
G
A
A
G
C
T
36
G
G
A
G
T
T
A
G
A
G
T
G
A
T
C
T
C
C
G
T
C
T
T
C
G
2
C
T
G
G
C
T
G
A
T
A
T
13
T
G
T
C
C
T
T
A
A
G
C
T
A
T
G
C
C
8
G
2
4
G
2
A
C
T
T
C
G
G
6
G
C
C
G
C
A
C
G
A
T
T
113
A
G
A
T
G
C
C
G
A
C
C
T
2
3
T
G
G
T
T
T
A
C
G
G
T
G
A
G
G
A
G
G
C
C
C
T
C
C
C
C
A
G
G
T
T
T
A
C
A
C
T
A
G
G
2
C
C
G
A
G
T
C
A
C
T
G
C
C
A
4
T
C
G
C
T
G
C
G
C
G
A
C
T
T
G
C
T
G
  19,600,552
  19,600,564
  19,600,600
  19,600,646
  19,600,882
  19,600,901
  19,601,013
  19,601,065
  19,601,222
  19,601,223
  19,601,488
  19,601,652
  19,601,771
  19,601,952
  19,602,169
  19,602,272
  19,602,441
  19,602,452
  19,602,490
  19,602,746
  19,602,961
  19,603,149
  19,603,379
  19,603,463
  19,603,465
  19,603,489
  19,603,516
  19,603,601
  19,603,614
  19,603,636
  19,603,722
  19,603,878
  19,603,986
  19,604,057
  19,604,149
  19,604,183
  19,604,208
  19,604,309
  19,604,378
  19,604,669
  19,604,778
  19,604,865
  19,604,880
  19,605,000
  19,605,014
  19,605,133
  19,605,218
  19,605,464
  19,605,507
  19,605,574
  19,605,634
  19,607,037
  19,607,792
  19,608,301
  19,609,189
  19,611,387
  19,612,314
  19,612,670
  19,612,671
  19,613,202
  19,613,387
  19,613,394
  19,613,404
  19,613,509
  19,613,580
  19,613,623
  19,613,664
  19,613,827
  19,613,930
  19,613,934
  19,613,970
  19,614,142
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  19,615,074
  19,615,336
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  19,615,362
  19,615,583
  19,615,646
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  19,616,072
  19,616,141
  19,616,330
  19,616,456
  19,616,458
  19,616,742
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  19,616,764
  19,616,842
  19,616,854
  19,617,056
  19,617,293
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  19,617,697
  19,617,706
  19,617,740
  19,617,766
  19,618,104
  19,618,152
  19,618,192
  19,618,284
  19,618,308
  19,618,450
  19,618,486
  19,618,538
  19,618,749
  19,618,871
  19,618,920
  19,618,929
  19,618,960
  19,618,961
  19,619,099
  19,619,231
  19,619,306
  19,619,507
  19,619,509
  19,619,827
  19,619,834
  19,619,840
  19,619,912
  19,619,967
  19,620,004
  19,620,089
  19,620,224
  19,620,337
  19,620,349
  19,620,371
  19,620,485
  19,620,489
  19,620,514
  19,620,568
  19,620,633
  19,620,668
  19,620,678
  19,620,700
  19,620,716
  19,620,796
  19,620,875
  19,620,884
  19,620,888
  19,620,891
  19,620,910
  19,620,934
  19,620,992
  19,621,047
  19,621,049
  19,621,101
  19,621,126
  19,621,127
  19,621,300
  19,621,316
  19,621,344
  19,621,375
  19,621,415
  19,621,453
  19,621,455
  19,621,499
  19,621,514
  19,621,579
  19,621,859
  19,621,885
  19,622,043
  19,622,199
  19,622,295
  19,622,331
  19,622,624
  19,622,657
  19,622,696
  19,622,718
  19,622,726
  19,623,018
  19,623,085
  19,623,134
  19,623,376
  19,623,409
  19,623,646
  19,623,838
  19,623,975
  19,624,025
  19,624,075
  19,624,085
  19,624,098
  19,624,319
  19,624,399
  19,624,746
  19,624,810
  19,624,834
  19,624,863
  19,624,878
  19,625,180
  19,625,837
  19,625,916
  19,626,245
  19,627,286
  19,627,600
  19,629,087
  19,629,812
  19,629,866
  19,630,051
  19,630,332
  19,631,345
  19,631,458
  19,631,816
  19,632,039
  19,632,040
  19,632,110
  19,632,999
  19,633,058
  19,633,134
  19,633,780
  19,634,170
  19,634,370
  19,634,620
  19,635,108
  19,635,202
  19,635,285
  19,636,011
  19,636,858
  19,637,252
  19,639,260
  19,639,588
  19,639,807
  19,639,974
  19,640,314
  19,640,433
  19,640,818
  19,640,909
  19,641,159
  19,641,239
  19,641,267
  19,641,332
  19,641,683
  19,641,823
  19,642,234
  19,642,296
  19,642,314
  19,642,335
  19,642,984
  19,644,021
  19,644,212
  19,645,019
  19,645,057
  19,645,065
  19,645,134
  19,645,162
  19,645,386
  19,645,429
  19,645,527
  19,645,728
  19,646,301
  19,646,329
  19,646,352
  19,646,405
  19,646,537
  19,646,970
  19,647,144
  19,647,393
  19,647,417
  19,647,421
  19,647,479
  19,647,617
  19,647,625
  19,647,654
  19,647,661
  19,647,666
  19,647,711
  19,647,745
  19,647,910
  19,647,944
  19,647,962
  19,647,968
  19,647,996
  19,648,025
  19,648,054
  19,648,104
  19,648,124
  19,648,206
  19,648,251
  19,648,290
  19,648,291
  19,648,296
  19,648,481
  19,648,529
  19,648,611
  19,648,653
  19,649,005
  19,649,186
  19,649,376
  19,649,476
  19,649,507
  19,649,633
  19,649,693
  19,649,701
  19,649,793
  19,649,801
  19,650,143
  19,650,144
  19,650,389
  19,651,511
  19,652,250
  19,652,417
  19,652,475
  19,653,298
  19,653,551
  19,653,633
  19,653,668
  19,653,710
  19,653,718
  19,653,729
  19,654,160
  19,654,554
  19,654,640
  19,654,672
  19,655,918
  19,656,779
  19,657,632
  19,657,894
  19,657,995
  19,658,254
  19,659,036
  19,659,194
  19,659,301
  19,659,830
  19,660,462
  19,660,781
  19,662,053
  19,663,077
  19,663,618
  19,663,718
  19,664,401
  19,664,561
  19,664,725
  19,666,787
  19,667,822
  19,667,924
  19,668,369
  19,669,893
  19,670,680
  19,671,036
  19,671,708
  19,672,719
  19,673,527
  19,675,013
  19,676,590
  19,679,237
  19,679,590
  19,679,594
  19,679,706
  19,679,733
  19,679,737
  19,680,093
  19,682,582
  19,683,421
  19,683,640
  19,683,943
  19,685,351
  19,685,608
  19,685,879
  19,685,964
  19,685,995
  19,686,118
  19,686,390
  19,686,480
  19,686,996
  19,687,360
  19,687,822
  19,687,864
  19,687,874
  19,688,202
  19,688,210
  19,688,216
  19,688,341
  19,688,475
  19,692,064
  19,692,601
  19,693,057
  19,693,967
  19,694,087
  19,694,878
  19,694,967
  19,695,018
  19,695,106
  19,695,117
  19,695,442
  19,695,549
  19,695,571
  19,695,921
  19,695,971
  19,696,171
  19,696,196
  19,696,430
  19,696,693
  19,696,864
  19,697,296
  19,698,482
  19,698,889
  19,698,917
  19,699,060
  19,699,065
  19,699,068
  19,699,078
  19,699,084
  19,699,098
  19,699,257
  19,699,396
  19,700,146
  19,700,783
  19,701,072
  19,701,427
  19,701,719
  19,701,733
  19,701,933
  19,702,326
  19,702,462
  19,702,881
  19,703,065
  19,703,438
  19,703,625
  19,703,721
  19,703,829
  19,704,007
  19,705,282
  19,705,586
  19,705,653
  19,705,790
  19,705,931
  19,706,121
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  19,707,158
  19,709,928
  19,710,203
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  19,716,295
  19,719,207
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  19,723,031
  19,723,757
  19,724,227
  19,724,857
  19,725,330
  19,725,715
  19,726,023
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  19,782,087
  19,782,934
A
-
T
A
T
G
T
C
A/T
A/T
G
G/5
G
A
A
C
C
G
G
2
C
C
A
G
G
C
C
G
C
C
G/A
C
-
A/T
A/G
G
G
3
C
G
T
G
3
12
C
A
C
T
C
T
A
T
C/T
C/T
A
4
C/T
T/-
T/G
A
T
T
G
A
G
T
G
A
T
-
C
T
A
G
A
C
3
T
G
A
C
C/T
G
T
G
G
T
5
G
T
C
A
C
G
-
G
A
-
G
C
G
T
A
C
T
T
G
C
A
G
T
C
-
G
C/10
2
C
G
G
C
A
-
T
C
T/C
A/G
C/T
G
T
4
2
7
T/-
23
T
C
T
C
T
C/A
3
T
T
G
A
G
T
A
C
6
A
A
T
A
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G/A
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2/-
G/A
A
A
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A
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C
A
A
T
G
C
C
T
C
G
3
A/G
T
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A
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3
A
A/G
G
C
T
21
C
G
C
2
A/G
A
A
A
G
11/-
T
G
A
-
A/2
T/8
G
2
2
C
G
G
C
T
A
T
4
A
G
C
3
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2
G/2
A
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9
A
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2
A
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A
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-
C
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A
G
A
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C
C
A
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2
T
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G
C
A
A
10
G
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5/-
-
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-
A
-
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A
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T
A
C
C
C
A
-
A
-
C
A
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C/2
A
A
A
C
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A
C
5
C
G
G
A/G
T
10/-
C
C
C
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C
C
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31/-
G
2
C
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A/G
C/T
A
T
A
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T
A/G
T
G
A
5
C
G
C
C
2
A
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G
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5
G
36/-
A
A
T
T
C
C
G
A
G
A
T/C
A
19
C
C/3
G
G
C/2
G/A
A
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C
C
T
T
-
T
T/C
A
G/A
A
C
A
10
G
A/G
C
13/-
C
A
A
T
T
C
C
G
G
A
T
A
A/2
C
T
G
T
-
A
2/-
4/-
A
-
A/17
T
T/C
T/C
A
A
C
-
5
C/G
T
A
A
A/G
T
G/6
A/C
T/C
C
113/-
T
G/4
C
C
G/16
C/A
T
A
G
A
T
C
-
-
C
A
A
C
C
A
T
T
A
A
A
A
G
2
2
G
G/5
A
T
T
T
-
T
T
T
T
T
A
A
C
C
C
G
C/G
C
T
C
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A
C
2/-
T
A
T
G
A
4
T
-
G
C
A
G
2
G
-
C
T
C
9
G
T
-
G/3
C/T
A
2
C/-
T/A
C
G/11
G
T/G
C