Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 37,361 (bp)   Positions: 102
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
SR/JrHsd (KNAW) 
.001
.001
--
--
--
.087
.398
.005
.006
.002
.014
.008
.026
.134
.064
.617
.024
.015
.061
--
--
--
--
--
--
--
--
.514
.011
.001
.0
.009
.013
.001
.001
.004
.001
.0
.003
.005
.002
.007
.253
.027
.068
.007
.014
.114
.137
.002
.001
.005
.819
.028
.059
.057
.029
.005
.046
.001
.0
.001
.006
.044
.004
--
--
--
.0
.003
.001
1.0
.0
.206
.006
.005
.0
.226
.046
.018
--
--
.203
.001
.0
.084
.079
.032
.481
.009
.02
.012
.007
.004
.002
--
--
.004
.082
.004
.429
.015
Kcnmb2
Kcnmb2
Kcnmb2
Kcnmb2
Kcnmb2
Kcnmb2
Kcnmb2
Kcnmb2
Kcnmb2
Kcnmb2
Kcnmb2
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
G
G
C
G
A
A
T
G
A
C
C
T
A
G
C
A
T
A
G
G
A
C
5
C
C
G
G
T
A
A
T
C
A
C
T
C
C
G
C
C
G
A
T
T
A
C
C
T
C
C
C
A
A
C
T
6
C
2
T
A
G
T
G
G
G
8
10
2
2
2
2
G
T
A
C
G
T
G
A
T
A
G
G
C
A
A
T
T
T
T
A
A
4
G
G
T
A
A
A
A
A
G
  138,219,735
  138,220,071
  138,220,268
  138,220,717
  138,220,727
  138,223,132
  138,224,598
  138,224,969
  138,225,503
  138,225,510
  138,225,538
  138,225,778
  138,225,980
  138,226,025
  138,226,354
  138,226,415
  138,226,562
  138,226,646
  138,226,773
  138,227,057
  138,227,088
  138,227,201
  138,227,203
  138,227,409
  138,227,491
  138,227,543
  138,227,627
  138,227,726
  138,227,939
  138,227,961
  138,228,163
  138,228,177
  138,228,178
  138,228,198
  138,228,203
  138,228,293
  138,228,300
  138,228,349
  138,228,556
  138,228,614
  138,228,785
  138,229,232
  138,229,688
  138,230,288
  138,230,313
  138,230,562
  138,230,674
  138,231,058
  138,231,062
  138,231,237
  138,231,501
  138,231,673
  138,231,734
  138,231,851
  138,232,138
  138,232,143
  138,232,165
  138,232,176
  138,232,188
  138,232,442
  138,232,503
  138,232,605
  138,233,109
  138,233,292
  138,233,509
  138,233,906
  138,233,914
  138,233,922
  138,233,990
  138,234,002
  138,234,026
  138,234,297
  138,234,429
  138,234,704
  138,235,938
  138,236,963
  138,237,063
  138,237,801
  138,238,128
  138,238,938
  138,239,160
  138,239,916
  138,240,374
  138,240,575
  138,240,626
  138,241,401
  138,241,832
  138,242,513
  138,242,531
  138,242,838
  138,244,045
  138,245,175
  138,246,740
  138,247,100
  138,247,482
  138,247,709
  138,248,130
  138,249,527
  138,249,622
  138,253,339
  138,253,882
  138,254,580
A
A
3
3
3
19
5
A
G
T
T
C
T
A
-
T
C
G
A
A
G
-
-
T
T
A
-
A
G
G
A
T
G
T
C
A
T
A
T
T
4
G
C
A
G
T
A
C
T
T
T
9
G
A
C
-
T
-
A
T
C
C
A
T
C
8/-
10/-
2/-
-
-
-
A
-
T
T
A
A
3/5
G
C
G
2
A
T
T
G
C
C
C
C
G
G
-
A
A
2
A/-
G
C
T
-
15/17