Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 698,006 (bp)   Positions: 84
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
LE/Stm (KyushuU) 
.001
.991
.155
.009
.96
.999
.0
.962
.287
.029
.777
.954
.537
.7
.054
.003
.876
.981
.034
.016
.107
.003
.071
.094
.026
.01
.258
.45
.014
.779
.99
.007
.525
.429
.001
.955
.0
1.0
.162
1.0
.0
.026
.868
.982
.996
.536
.0
.001
.006
.994
.973
.025
.135
.96
1.0
.998
.895
.96
.984
.917
.919
.998
1.0
.998
.406
1.0
.0
.987
.998
.995
.013
.165
1.0
.955
.799
.477
.001
.982
.977
.998
.97
.408
1.0
.993
Kcnma1
Kcnma1
Kcnma1
Kcnma1
Kcnma1
Kcnma1
Kcnma1
Kcnma1
Kcnma1
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
T
31
T
G
G
T
A
A
C
T
T
C
T
A
T
C
T
A
A
A
G
G
C
A
2
A
A
G
C
2
C
T
G
C
C
G
C
T
G
A
G
C
C
T
C
A
3
A
C
C
T
T
T
C
G
A
G
A
C
G
A
A
C
C
G
C
G
3
T
T
G
T
C
G
G
T
C
A
A
T
G
2
C
T
  438,846
  442,914
  465,427
  499,074
  533,744
  533,782
  533,907
  543,106
  545,061
  564,217
  574,503
  578,488
  578,976
  578,981
  585,556
  587,175
  617,715
  663,976
  681,789
  681,915
  681,920
  701,814
  704,197
  706,596
  708,600
  709,160
  737,654
  746,055
  749,326
  771,775
  771,881
  775,404
  798,597
  798,646
  808,881
  808,935
  809,002
  810,486
  812,773
  816,307
  823,372
  825,495
  833,101
  833,518
  863,456
  889,854
  891,126
  895,758
  897,704
  897,739
  897,933
  898,013
  902,369
  906,512
  912,877
  915,282
  916,849
  921,450
  934,722
  939,853
  941,381
  941,905
  943,608
  944,731
  944,827
  944,963
  948,943
  955,863
  956,105
  981,753
  986,223
  986,670
  992,206
  993,587
  994,607
  995,654
  995,664
  1,021,884
  1,024,170
  1,027,441
  1,028,738
  1,028,812
  1,028,953
  1,036,205
T/C
31/-
T/A
G/T
G/A
T/C
A/12
A/G
C/T
T/C
T/C
C/T
T/G
A/T
T/C
C/T
T/C
A/G
A/T
A/2
G/-
G/-
C/T
A/C
2/-
A/3
A/G
G/A
C/T
2/-
C/T
T/A
G/A
C/T
C/-
G/A
C/G
T/C
G/A
A/G
G/2
C/T
C/G
T/C
C/T
A/G
3/-
A/G
C/A
C/22
T/G
T/3
T/G
C/2
G/A
A/-
G/A
A/G
C/G
G/A
A/G
A/G
C/T
C/T
G/A
C/T
G/A
3/-
T/A
T/-
G/A
T/C
C/T
G/T
G/A
T/10
C/G
A/-
A/G
T/A
G/2
2/-
C/T
T/G