Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 146,331 (bp)   Positions: 362
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
.045
.0
.001
.006
.003
.0
.009
.001
.08
.001
.033
.002
.004
.005
.04
.011
.001
.078
.013
.049
.005
.013
.002
.024
.001
.364
.02
.0
.002
.021
.071
.001
.0
.0
.021
.275
.815
.0
.0
.002
.001
.001
.0
.0
.004
.016
.001
.002
.015
.003
.002
.009
.024
.0
.0
.086
.001
.069
.105
.002
.02
.097
.028
.001
.0
.021
.001
.41
.003
.001
.0
.0
.001
.004
.0
.0
.906
.009
.869
.012
.0
.014
.037
.0
.901
.88
.267
.796
.0
.002
.935
.552
.024
.153
.019
.006
.007
.004
.0
.965
.876
.0
.0
.003
.02
.867
.16
.001
.206
.0
.001
.01
.003
.0
.0
.0
.0
.001
.145
.006
.0
.003
.005
.0
.006
.006
.01
.002
.0
.005
.001
.0
.07
.019
.0
.003
.009
.02
.004
.004
.009
.005
.007
.014
.008
.251
.05
.089
.043
.005
.005
.003
.0
.137
.024
.01
1.0
.252
.023
.278
--
.007
.012
.104
.114
.008
.01
.002
.01
.011
.005
.07
.246
.042
.02
.08
.435
.5
.004
--
--
--
--
--
--
--
--
.062
.35
.072
.051
.21
.014
.088
.032
.995
.997
.032
.194
.175
.042
--
.003
.003
.002
.001
.317
.009
.067
.001
.18
.452
.018
.317
.01
.009
.453
.113
.0
.024
.0
.003
.92
.001
.046
.002
.002
.071
.0
.212
.0
1.0
.002
.004
1.0
.985
.027
.038
.092
.014
.016
.018
.005
.286
.013
.0
.015
.0
.001
.998
.001
.0
.003
.588
.0
.198
.039
.014
.014
.011
.013
.254
.004
.211
.001
.001
.001
.0
.019
.0
.093
.064
.173
.022
.011
.085
.016
.029
.126
.587
--
--
--
--
.108
.062
.006
.015
.019
.031
.04
.002
.0
.001
.003
.005
.151
.0
.002
.001
.0
.004
.003
.018
.031
.001
.005
.002
.004
.003
.006
.001
.056
.169
.0
.001
.0
.012
.0
.014
.001
.004
.103
.006
.042
.006
.01
.142
.102
.003
.008
.028
.0
.001
.0
--
--
--
--
.033
.003
.02
.026
.003
.0
.016
.008
.0
.006
.005
.01
.015
.001
.004
.239
.001
.271
.017
.0
.026
.004
.153
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
LOC102550643
LOC102550643
LOC102550643
LOC102550643
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
Ica1
2
T
C
G
C
T
A
T
C
T
C
G
A
G
G
6
C
G
G
C
G
C
T
T
A
C
T
T
T
32
A
C
C
C
G
C
C
G
2
G
8
C
G
40
T
C
C
C
C
T
G
T
A
G
G
G
C
G
T
C
G
C
T
C
G
T
C
T
C
A
A
G
C
T
C
T
G
A
G
T
T
C
G
A
C
3
T
T
2
T
G
C
G
A
A
T
A
C
G
C
2
G
T
G
3
G
A
C
G
G
C
A
G
T
C
C
A
T
G
C
G
C
G
G
8
C
A
T
4
T
T
T
C
A
A
A
C
G
T
G
G
G
T
A
A
A
G
T
5
A
A
18
T
T
T
G
T
52
T
A
14
C
A
14
12
G
G
T
A
G
C
C
A
C
T
T
T
G
T
G
G
C
A
T
C
G
A
C
C
G
T
G
A
A
G
4
2
G
34
32
G
5
3
2
A
A
T
G
C
A
G
A
G
G
A
G
C
T
G
T
T
T
A
A
G
A
T
T
T
T
C
G
A
C
5
G
G
G
C
G
C
G
G
T
C
T
C
2
G
25
10
A
G
C
G
A
G
A
T
A
A
G
C
T
C
A
G
2
A
T
10
A
C
T
T
A
G
T
T
G
A
G
C
12
G
A
T
T
T
T
T
G
G
A
C
C
T
G
C
C
A
3
G
G
2
T
C
T
G
T
4
2
A
G
A
G
T
C
T
G
G
7
A
G
C
G
C
T
A
C
G
C
G
C
T
A
A
G
G
T
G
T
T
C
G
T
A
G
C
G
G
A
G
G
T
T
G
A
C
C
37
C
  34,494,032
  34,494,072
  34,494,371
  34,494,551
  34,494,851
  34,495,011
  34,495,104
  34,495,778
  34,495,919
  34,496,639
  34,497,483
  34,497,513
  34,497,558
  34,497,571
  34,497,713
  34,497,794
  34,497,880
  34,497,907
  34,497,916
  34,497,947
  34,498,072
  34,498,118
  34,498,595
  34,498,646
  34,498,807
  34,499,109
  34,499,455
  34,499,574
  34,499,757
  34,499,894
  34,500,596
  34,500,809
  34,501,106
  34,501,114
  34,501,386
  34,501,540
  34,501,670
  34,501,699
  34,501,741
  34,501,743
  34,501,745
  34,501,779
  34,501,785
  34,501,793
  34,502,316
  34,502,389
  34,502,567
  34,502,610
  34,502,796
  34,502,835
  34,502,965
  34,503,246
  34,504,185
  34,504,427
  34,504,659
  34,505,453
  34,505,632
  34,507,110
  34,507,124
  34,507,506
  34,507,771
  34,507,864
  34,507,978
  34,508,984
  34,509,369
  34,509,459
  34,509,539
  34,509,635
  34,510,683
  34,510,880
  34,511,758
  34,511,901
  34,512,372
  34,512,408
  34,513,403
  34,514,195
  34,514,517
  34,515,412
  34,515,657
  34,515,959
  34,516,604
  34,517,178
  34,518,289
  34,518,888
  34,519,058
  34,519,198
  34,519,213
  34,519,329
  34,519,354
  34,519,382
  34,519,569
  34,519,698
  34,519,724
  34,519,764
  34,520,467
  34,521,268
  34,521,473
  34,522,467
  34,522,925
  34,523,189
  34,523,544
  34,523,858
  34,523,913
  34,524,125
  34,525,435
  34,525,521
  34,525,804
  34,526,746
  34,526,845
  34,527,367
  34,527,433
  34,527,639
  34,528,360
  34,528,492
  34,529,699
  34,529,704
  34,529,742
  34,529,743
  34,529,968
  34,530,077
  34,532,593
  34,532,707
  34,532,871
  34,532,911
  34,533,487
  34,533,522
  34,533,526
  34,533,652
  34,533,810
  34,533,854
  34,536,056
  34,536,180
  34,537,516
  34,537,630
  34,537,679
  34,537,971
  34,538,745
  34,539,378
  34,539,681
  34,539,789
  34,540,895
  34,540,969
  34,541,291
  34,541,665
  34,543,759
  34,543,791
  34,543,840
  34,544,517
  34,544,856
  34,546,316
  34,546,995
  34,547,769
  34,550,008
  34,551,187
  34,554,220
  34,556,174
  34,556,576
  34,557,238
  34,558,384
  34,558,584
  34,559,366
  34,560,551
  34,561,048
  34,561,731
  34,561,733
  34,562,238
  34,562,342
  34,562,783
  34,562,891
  34,563,257
  34,563,324
  34,563,522
  34,570,144
  34,570,337
  34,570,348
  34,570,864
  34,570,897
  34,570,908
  34,571,034
  34,571,103
  34,571,152
  34,571,236
  34,571,370
  34,571,464
  34,571,622
  34,573,067
  34,573,145
  34,573,627
  34,573,697
  34,573,727
  34,573,873
  34,574,149
  34,575,359
  34,575,736
  34,576,034
  34,576,345
  34,576,347
  34,576,785
  34,577,087
  34,577,089
  34,578,701
  34,579,216
  34,579,539
  34,579,540
  34,580,114
  34,580,798
  34,581,165
  34,581,612
  34,581,801
  34,582,556
  34,583,769
  34,584,711
  34,584,767
  34,585,148
  34,585,391
  34,586,404
  34,586,667
  34,587,642
  34,588,751
  34,590,075
  34,590,456
  34,590,468
  34,590,588
  34,591,059
  34,591,756
  34,591,764
  34,592,543
  34,592,751
  34,593,792
  34,593,925
  34,594,303
  34,595,319
  34,595,448
  34,596,029
  34,596,138
  34,596,153
  34,596,181
  34,596,183
  34,596,259
  34,596,326
  34,596,358
  34,596,474
  34,596,508
  34,596,587
  34,596,786
  34,596,929
  34,597,706
  34,597,722
  34,597,932
  34,599,527
  34,600,889
  34,601,590
  34,601,724
  34,605,096
  34,605,182
  34,606,126
  34,606,152
  34,606,398
  34,606,488
  34,606,604
  34,606,640
  34,606,754
  34,606,930
  34,607,001
  34,607,513
  34,607,908
  34,608,072
  34,608,170
  34,608,307
  34,608,372
  34,608,639
  34,608,693
  34,609,237
  34,609,477
  34,610,442
  34,612,287
  34,612,435
  34,613,138
  34,614,211
  34,614,251
  34,614,494
  34,614,531
  34,614,533
  34,614,584
  34,615,068
  34,615,221
  34,617,082
  34,617,819
  34,618,038
  34,618,317
  34,618,717
  34,619,139
  34,619,476
  34,620,301
  34,620,321
  34,620,481
  34,620,551
  34,620,704
  34,620,709
  34,620,737
  34,621,147
  34,621,152
  34,621,314
  34,621,519
  34,621,846
  34,621,896
  34,622,438
  34,622,718
  34,622,768
  34,622,915
  34,623,012
  34,623,014
  34,623,082
  34,623,090
  34,623,565
  34,624,035
  34,624,232
  34,624,583
  34,624,735
  34,625,659
  34,625,808
  34,626,048
  34,626,126
  34,626,598
  34,626,924
  34,627,671
  34,627,807
  34,628,064
  34,628,191
  34,628,210
  34,628,278
  34,628,313
  34,628,709
  34,628,985
  34,629,477
  34,629,580
  34,629,711
  34,630,492
  34,630,644
  34,630,846
  34,630,857
  34,631,159
  34,631,860
  34,631,903
  34,632,166
  34,632,236
  34,632,292
  34,632,720
  34,633,628
  34,633,884
  34,633,893
  34,634,249
  34,634,641
  34,634,966
  34,635,298
  34,636,390
  34,636,511
  34,636,607
  34,637,901
  34,638,915
  34,639,347
  34,639,900
-
C
G
A
A
C
G
C
G
C
A
A
T
A
A
-
G
A
A
T
A
T
C
G
G
A
A
C
C
-
G
7
G
T
A
G
A
A
-
C
-
-
-
-
C
T
T
T
5
G
T
A
G
-
C
25
T
G/-
A
T
A
T
C
T
A
C
9/7
A
T
T
G
A
G
C
T
-
T
T
A
C
A
T
-
G
T
-
G
C
-
3
2
T
A
T
-
G
7/9
-
79
CA/3
-
G/-
C
A
-
A
G
T
A
T
A
2
A
C
A
T
G
A
A
T
A
T
A
A
-
C/3
C
4
-
C
C
C
T
19/17
T
G
G
11
A
A
T
T
C
G
C
G
C
-
-
T
C
-
C
C
-
A
7/6
-
G
G
-
T
T
14/-
12/-
A
T
C
G
C
G
A
T
A
C
C
G
A
C
A
A
3
G
C
G
T
C
T
T
A
A
A
G
C
A
4/-
2/-
T
34/-
32/-
C
-
3/-
2/-
2
5
C
A
2
C
A
A/15
13/6
5/9
2
T
T
2
A
C
C
C
G
G
A
G
TA/3
A
C
G
T
A
G
G
5/-
3
A
A
T
A
T
A
C
G
3
C
G
-
T
-
10/-
G
2
T
A
-
A
G
C
G
C
A
T
-
G
T
A
-
G
C
10/-
C
T
2
7
-
A
A
T/13
G/5
G
C
G
-
T
-
C
C
C
C
-
A
T
G
T
T
A
A
A
T
G
-
T
2
-
C
T
3
A
C
4/-
2/-
-
A
G
A
C
G
C
3
A
-
G
A
A
A
G
C
C
T
A
T
A
T
C
G
G
T
T
C
-
2
C
A
A
4
C
C
T
C
A
C
A
G/2
C
A
A
17
T
2
-
T