Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 38,929 (bp)   Positions: 79
Conservation 
Genes ( + ) 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
ACI/N (KNAW) 
.001
.098
.001
.007
.003
.001
.205
.143
.074
.001
.0
.032
.012
.0
.007
.0
.003
.013
.0
.028
.006
.006
.491
.012
.0
.001
.082
.405
.0
.066
.0
.006
.005
.002
.242
.0
.962
.0
.001
.139
.012
.016
.264
.029
.002
.005
.001
.002
.005
.0
.003
.01
.049
.001
.002
.041
.002
.011
.008
.054
.438
.01
.063
.365
.652
.023
.003
.112
.112
.018
.001
.985
.248
.001
.0
.059
.003
.04
.084
Hm13
Hm13
Hm13
Hm13
Hm13
Hm13
Hm13
Hm13
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
T
A
A
4
G
G
T
A
A
T
A
A
6
T
T
T
A
C
A
A
T
G
C
C
C
C
T
2
G
G
A
A
2
6
T
T
G
A
G
T
T
G
T
T
A
A
C
A
A
G
C
C
T
C
A
C
G
A
G
A
A
T
G
G
A
T
T
G
T
G
C
G
T
C
T
G
G
C
C
  154,555,729
  154,556,188
  154,558,264
  154,559,678
  154,559,929
  154,561,020
  154,561,611
  154,562,011
  154,562,174
  154,562,187
  154,562,247
  154,562,800
  154,562,802
  154,563,507
  154,563,566
  154,563,864
  154,563,949
  154,566,583
  154,566,893
  154,566,948
  154,566,975
  154,567,096
  154,567,680
  154,567,796
  154,567,963
  154,568,441
  154,568,924
  154,570,165
  154,570,685
  154,570,765
  154,570,874
  154,570,875
  154,571,202
  154,571,206
  154,571,946
  154,572,042
  154,573,224
  154,574,704
  154,575,092
  154,576,635
  154,576,640
  154,578,177
  154,578,593
  154,578,705
  154,579,134
  154,579,152
  154,579,615
  154,579,955
  154,580,590
  154,581,253
  154,581,549
  154,582,379
  154,583,733
  154,585,480
  154,586,019
  154,586,278
  154,586,812
  154,586,942
  154,586,961
  154,587,127
  154,587,156
  154,587,218
  154,587,606
  154,587,900
  154,587,909
  154,588,405
  154,588,679
  154,588,694
  154,588,697
  154,590,030
  154,590,910
  154,591,519
  154,591,851
  154,592,491
  154,592,744
  154,592,942
  154,592,976
  154,593,229
  154,593,689
2
T
C
-
G/T
A
G
G
G
-
G
3
-
C
A
C
-
T
A/2
T
G
A
G
3
T
T
G
-
T
2
T
C
-
-
C
C
A
G
A
T/C
C
A
G
A
G
C
T
C
T
C
T
G
G
A
G
2
A
G
A
G
G
C
2
C
G
A
C
A
G
A
T
A
C
G
C
2
A
T
3