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  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 197,850 (bp)   Positions: 562
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
.536
.221
.005
.993
.855
.005
.986
.11
.001
.031
.003
.006
.047
.005
.971
.465
.001
.006
.015
.008
.983
.008
.014
.001
.125
.928
.003
.001
.001
.0
.036
.45
.001
.005
.004
.121
.004
.004
.012
.009
.047
.013
.002
.916
.003
.003
.001
.001
.001
.302
.008
.011
.001
.014
.015
--
--
--
.016
.0
.003
.015
.05
--
--
--
--
.854
.001
.144
--
--
--
--
--
.005
.016
.002
.022
.132
.001
.0
.005
.003
.156
.011
.009
.187
.142
.001
--
--
--
.146
.012
.0
.002
.001
.002
--
.028
.049
.016
--
--
--
--
.011
.002
.933
.012
.003
.001
.018
.01
.0
.0
.005
.0
.004
.001
.115
.358
.003
.002
.014
.479
.099
.007
.054
.013
.002
.017
--
.016
.371
.009
.008
.395
.002
.985
.154
.56
.009
.001
.019
.003
.0
.005
.229
.12
.0
.0
.039
.125
.302
.005
.146
.978
.996
.002
.029
.001
.01
.005
.015
.081
.001
.006
--
--
--
--
.053
.018
.027
.002
.001
.0
.001
.002
.0
.186
.089
.992
.987
.534
.002
.009
.001
.014
.159
.006
.001
.128
.131
.114
.014
.013
.084
.101
.187
.006
--
--
.024
.029
.004
.038
.024
.029
.04
.001
.0
.41
.108
.0
.967
.988
.105
.124
.117
.001
.002
.003
.015
.003
.951
.004
.025
.299
--
.09
.004
.003
.0
1.0
.004
.173
.18
.003
.004
.25
.012
.003
.147
.009
.02
.015
.103
.006
.011
.028
.0
.002
.085
.0
.001
.003
.021
.995
.019
.001
--
--
.178
.017
.046
--
.0
.0
.323
.021
.029
.48
.478
.104
.004
.003
--
.006
.018
.001
.006
.048
.017
.048
.001
.001
.001
.001
.0
.001
.003
.0
.003
.0
.0
.031
.0
.014
.05
.019
.011
--
--
--
.018
1.0
.002
.001
.026
.016
.0
.0
--
--
--
--
.0
--
.472
.147
--
--
.014
.002
.002
.434
.0
.077
.003
.002
--
--
.028
.286
.059
.016
.02
--
--
--
--
--
--
--
.994
.003
.214
.007
.386
1.0
.008
.001
.442
.78
.847
.374
.001
.0
.002
.893
.0
.012
.075
.003
.275
.331
.058
.01
.004
.195
.076
.262
.072
.029
.038
.268
.084
.076
.265
.335
.678
.007
.0
.004
.001
.031
.001
.0
.165
.014
.012
.0
.088
.19
.005
.007
.014
.059
.051
.004
.006
.008
.0
.0
.0
.119
.002
.002
.002
.0
.001
.0
.002
.004
.0
.004
.003
.266
.06
.001
.031
.007
.008
.0
.001
.0
.002
--
--
--
--
.276
.011
.055
.002
.213
.001
.529
.084
.189
.108
.04
.001
.0
.001
.0
.008
.037
.001
.0
.001
.019
.0
.019
.004
.0
.007
.01
.003
.0
.002
.023
.145
.099
.861
.89
.007
.594
.373
.404
.005
.315
.3
.23
.002
.008
.005
.002
.002
.012
--
--
.038
.03
.002
.0
.998
.004
.038
.004
.444
.019
.744
.002
--
--
--
--
--
--
--
--
--
.001
.019
.001
.025
.021
.02
.031
.135
--
--
.122
.025
.557
.916
1.0
.994
.998
.648
.002
.944
.044
1.0
.998
.0
.001
.001
.003
.059
.036
.134
.0
.001
.001
.0
.001
.033
.0
.003
.926
1.0
.206
.025
.001
.001
.007
.006
.0
.001
.004
.064
.002
.0
.015
.018
.038
.001
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
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Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
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Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
Hivep2
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--
T
T
C
G
T
3
G
T
14
C
G
C
G
A
C
A
T
T
T
A
T
T
A
G
T
G
T
C
A
G
C
C
C
G
C
A
T
T
2
A
T
G
A
T
G
C
5
C
C
T
76
G
A
C
T
T
G
T
G
C
A
A
A
C
A
A
10
G
G
T
T
G
T
C
T
A
G
C
T
2
C
C
G
A
G
A
T
G
T
G
C
G
C
C
A
G
A
A
A
A
A
C
T
G
G
C
C
C
T
T
T
C
T
C
C
G
9
T
C
A
A
T
C
A
A
G
T
C
G
C
T
T
A
20
T
T
G
C
A
A
C
A
G
T
A
A
G
A
A
A
T
G
T
C
A
C
C
G
T
G
T
A
A
G
G
C
A
C
12
A
G
G
A
A
G
G
C
A
G
A
T
C
A
T
G
T
T
T
A
C
A
31
T
G
14
12
C
T
G
C
C
A
T
2
A
A
G
T
C
C
T
A
C
G
T
C
G
T
G
A
A
G
G
G
A
T
A
T
C
A
A
C
A
A
T
G
T
T
4
G
T
T
A
T
C
T
C
G
A
T
C
A
A
T
C
T
G
C
G
A
T
G
G
A
G
A
2
G
4
T
T
T
A
G
C
G
T
T
C
8
T
G
C
A
C
T
4
T
C
T
A
C
G
A
T
C
C
C
C
G
A
T
T
G
12
10
C
G
G
T
G
G
A
G
T
C
G
C
C
C
G
G
C
4
2
A
G
T
C
A
T
6
4
12
T
G
5
4
4
2
C
T
G
4
C
A
2
G
A
8
G
A
G
A
C
T
C
T
4
18
A
C
A
G
T
G
T
C
4
C
C
C
T
T
G
C
4
A
T
C
G
T
T
2
C
T
A
T
G
A
T
A
G
T
C
G
T
20
18
A
G
G
A
A
G
C
G
T
A
A
T
C
A
T
C
A
T
T
A
T
C
T
C
C
4
2
C
A
T
C
T
A
A
G
G
T
A
2
A
G
A
T
C
44
A
G
A
C
C
G
T
T
G
A
A
G
A
A
T
G
A
G
G
C
G
A
C
G
T
T
A
T
T
A
A
T
T
C
A
A
2
T
C
2
T
T
A
C
A
T
C
G
17
G
A
G
C
2
6
T
4
2
A
2
C
C
A
G
G
T
T
A
C
C
A
A
C
T
A
A
A
A
T
C
T
G
G
C
A
4
2
C
A
T
G
G
C
A
G
T
G
C
4
A
G
T
G
T
2
A
A
T
9
8
G
C
G
C
T
A
C
G
  9,756,418
  9,756,657
  9,756,732
  9,757,137
  9,757,221
  9,757,320
  9,757,382
  9,758,050
  9,758,612
  9,759,453
  9,760,551
  9,761,002
  9,761,124
  9,762,061
  9,762,695
  9,762,757
  9,763,425
  9,763,676
  9,763,888
  9,764,026
  9,765,884
  9,766,345
  9,766,546
  9,767,027
  9,767,045
  9,767,161
  9,767,238
  9,767,512
  9,767,742
  9,768,716
  9,769,162
  9,769,293
  9,769,682
  9,769,817
  9,770,092
  9,771,220
  9,771,290
  9,771,318
  9,772,338
  9,772,339
  9,772,994
  9,773,060
  9,773,430
  9,773,719
  9,774,036
  9,774,982
  9,774,985
  9,774,986
  9,774,989
  9,777,039
  9,777,982
  9,779,025
  9,779,136
  9,779,166
  9,779,345
  9,779,478
  9,779,479
  9,780,498
  9,780,919
  9,781,486
  9,781,697
  9,782,618
  9,782,909
  9,783,175
  9,783,210
  9,783,222
  9,783,273
  9,783,578
  9,783,640
  9,784,097
  9,784,531
  9,784,583
  9,784,724
  9,784,854
  9,784,933
  9,785,684
  9,785,946
  9,786,037
  9,786,108
  9,786,617
  9,787,082
  9,787,523
  9,787,802
  9,788,366
  9,788,687
  9,789,530
  9,790,078
  9,791,456
  9,792,231
  9,792,254
  9,792,592
  9,792,652
  9,792,819
  9,793,249
  9,794,076
  9,794,441
  9,794,843
  9,795,545
  9,797,988
  9,798,266
  9,798,604
  9,799,084
  9,800,451
  9,800,913
  9,800,915
  9,801,128
  9,801,194
  9,802,064
  9,802,815
  9,807,562
  9,808,022
  9,808,088
  9,808,131
  9,808,306
  9,808,506
  9,808,711
  9,808,916
  9,809,069
  9,809,514
  9,809,734
  9,809,741
  9,810,184
  9,810,213
  9,810,496
  9,810,502
  9,810,644
  9,810,995
  9,811,027
  9,811,106
  9,811,406
  9,811,688
  9,811,805
  9,811,844
  9,811,935
  9,812,214
  9,812,392
  9,812,526
  9,812,815
  9,813,563
  9,813,619
  9,813,777
  9,819,358
  9,819,481
  9,819,546
  9,820,306
  9,820,494
  9,821,016
  9,821,049
  9,821,088
  9,821,101
  9,821,354
  9,821,449
  9,821,566
  9,821,957
  9,822,679
  9,822,747
  9,822,847
  9,823,035
  9,823,890
  9,824,053
  9,824,195
  9,824,214
  9,824,254
  9,824,569
  9,825,011
  9,825,381
  9,825,461
  9,825,650
  9,825,693
  9,825,819
  9,826,020
  9,826,600
  9,827,192
  9,827,958
  9,828,358
  9,828,379
  9,828,914
  9,828,915
  9,828,924
  9,828,933
  9,829,531
  9,829,665
  9,829,859
  9,830,120
  9,830,183
  9,830,186
  9,830,437
  9,830,679
  9,830,792
  9,830,802
  9,831,105
  9,831,228
  9,831,360
  9,831,414
  9,831,793
  9,831,795
  9,831,852
  9,832,237
  9,832,278
  9,832,534
  9,832,623
  9,832,701
  9,832,858
  9,833,042
  9,833,069
  9,833,440
  9,833,542
  9,833,790
  9,833,815
  9,833,832
  9,833,849
  9,834,192
  9,834,292
  9,834,332
  9,834,762
  9,834,984
  9,835,239
  9,835,330
  9,835,376
  9,835,443
  9,835,482
  9,835,487
  9,835,603
  9,835,944
  9,835,973
  9,835,982
  9,836,101
  9,836,307
  9,836,353
  9,836,510
  9,836,688
  9,836,850
  9,837,255
  9,837,447
  9,837,481
  9,838,249
  9,838,681
  9,838,888
  9,839,111
  9,839,115
  9,839,318
  9,839,452
  9,839,965
  9,840,305
  9,840,315
  9,840,556
  9,840,705
  9,841,046
  9,841,300
  9,841,602
  9,842,609
  9,843,293
  9,843,743
  9,844,277
  9,844,386
  9,844,459
  9,844,817
  9,845,187
  9,845,785
  9,845,868
  9,845,896
  9,846,864
  9,846,903
  9,848,122
  9,848,465
  9,850,061
  9,850,111
  9,850,260
  9,850,685
  9,850,856
  9,850,963
  9,851,177
  9,851,194
  9,851,298
  9,851,313
  9,851,334
  9,851,475
  9,851,727
  9,852,016
  9,852,095
  9,852,507
  9,852,709
  9,854,401
  9,855,125
  9,855,568
  9,855,670
  9,857,476
  9,859,230
  9,859,491
  9,859,880
  9,859,881
  9,859,882
  9,859,888
  9,859,896
  9,859,905
  9,859,952
  9,860,001
  9,860,054
  9,860,144
  9,860,582
  9,861,946
  9,864,370
  9,864,789
  9,864,944
  9,865,865
  9,865,867
  9,865,906
  9,869,485
  9,869,583
  9,870,113
  9,870,178
  9,871,033
  9,871,233
  9,872,398
  9,872,421
  9,874,282
  9,874,293
  9,874,298
  9,874,306
  9,876,394
  9,877,008
  9,877,219
  9,877,305
  9,879,115
  9,879,117
  9,879,232
  9,882,023
  9,882,065
  9,882,495
  9,882,677
  9,882,990
  9,883,243
  9,883,245
  9,884,230
  9,884,416
  9,885,358
  9,886,118
  9,886,155
  9,886,162
  9,886,164
  9,886,225
  9,886,227
  9,886,258
  9,886,290
  9,886,703
  9,886,825
  9,887,216
  9,887,644
  9,888,115
  9,888,523
  9,888,989
  9,890,265
  9,890,754
  9,891,013
  9,891,047
  9,891,922
  9,891,982
  9,891,987
  9,892,030
  9,892,191
  9,893,208
  9,893,327
  9,893,493
  9,893,625
  9,893,666
  9,893,861
  9,894,402
  9,894,576
  9,895,202
  9,895,673
  9,895,760
  9,895,781
  9,896,342
  9,896,397
  9,896,419
  9,896,430
  9,896,519
  9,896,588
  9,896,634
  9,896,707
  9,896,936
  9,896,962
  9,897,269
  9,897,590
  9,897,739
  9,897,970
  9,899,296
  9,899,448
  9,899,529
  9,899,609
  9,899,610
  9,899,666
  9,899,674
  9,899,688
  9,899,874
  9,900,257
  9,900,443
  9,900,920
  9,900,922
  9,901,331
  9,902,087
  9,902,091
  9,902,310
  9,902,392
  9,902,466
  9,903,036
  9,903,060
  9,903,218
  9,903,694
  9,904,980
  9,905,064
  9,905,313
  9,905,314
  9,905,776
  9,906,025
  9,906,063
  9,906,106
  9,906,708
  9,906,789
  9,907,065
  9,907,216
  9,907,564
  9,907,576
  9,907,596
  9,907,707
  9,907,709
  9,907,857
  9,908,146
  9,908,388
  9,908,396
  9,908,603
  9,908,655
  9,908,839
  9,908,847
  9,909,004
  9,909,587
  9,909,861
  9,909,892
  9,909,954
  9,909,983
  9,910,007
  9,910,046
  9,910,064
  9,910,253
  9,910,336
  9,910,371
  9,910,379
  9,910,382
  9,910,600
  9,910,716
  9,910,786
  9,910,798
  9,911,001
  9,911,034
  9,911,147
  9,911,194
  9,911,401
  9,911,810
  9,911,876
  9,911,900
  9,912,235
  9,912,588
  9,912,613
  9,912,688
  9,912,730
  9,913,683
  9,913,692
  9,914,039
  9,914,043
  9,914,069
  9,914,210
  9,914,325
  9,914,734
  9,915,876
  9,917,584
  9,917,699
  9,917,907
  9,918,633
  9,920,265
  9,920,280
  9,920,371
  9,920,473
  9,920,493
  9,920,643
  9,920,655
  9,920,947
  9,920,950
  9,921,060
  9,921,165
  9,921,279
  9,922,185
  9,922,328
  9,922,457
  9,922,847
  9,922,972
  9,923,076
  9,924,161
  9,924,556
  9,924,577
  9,924,598
  9,924,613
  9,924,623
  9,924,646
  9,924,654
  9,924,661
  9,924,668
  9,924,690
  9,925,855
  9,925,970
  9,926,224
  9,926,284
  9,926,617
  9,927,417
  9,927,460
  9,928,055
  9,928,058
  9,928,585
  9,929,193
  9,930,013
  9,931,461
  9,931,513
  9,932,136
  9,932,726
  9,932,919
  9,933,104
  9,933,163
  9,933,428
  9,933,832
  9,936,657
  9,938,353
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  9,939,050
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  9,939,922
  9,940,086
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  9,940,777
  9,940,998
  9,941,000
  9,943,046
  9,943,233
  9,943,494
  9,943,939
  9,945,762
  9,945,918
  9,946,642
  9,946,717
  9,947,579
  9,947,582
  9,947,917
  9,947,918
  9,947,981
  9,947,982
  9,948,825
  9,948,969
  9,949,263
  9,950,116
  9,951,026
  9,951,521
  9,953,207
  9,953,413
T/5
A
2
A
A
-
4
G
-
T
A
T
A
G
A
-
C
G
C
T
G
C
G
A
C
T
C
T
G
A
T
A
T
T
G
-
C
C
2/-
A/-
G
-
G
-
A
C/-
5/-
C/T
C/T
G
-
A
G
A
2
C
C
C
A
G
G
C
G
5/5
A/11
T
-
C
A
C
G
C
G
G
C
C
A
A
C
-
T
G
A
G
A
T
G
A
C
A
9/13
9/13
5
T
G
T
C
T
G
13
9
T
A
-
-
29
5
18
C
C
A
A
C
T
T
-
-
C
T
G
G
C
G
27
17
A
122
T
C
T
4
19
3
-
A
-
A
T
2
G
T
G
A
C
C
-
A
6
G
C
C
T
2
T
T
A
T
25
C
A
C
G
2
C
A
G
4
-
-
G
A
A
G
-
2
A
T
G
2
T
2
T
6
C
A
2
G
3
T
T
G
-
C
C
14/-
12/-
T
C
A
T
C/9
G
T/99
-
G
G
A
C
8/7
A
C
G
T
T
2
T
A
C
A
G
G
A
5
A
G
G
G
T/-
A
2
G
T
2
G
A
-
C
12
-
T
C
C
2
9
3
G
T
A
G
C
T
A/25
G
13
G
C
A
3
A
25
2
2
2
G
2
-
-
A
-
G
A
C
G
2
T
2
-
C
T
-
-
2
T
G
T
G
4/-
C
G
A
4
G
T
G
C
T
T
2
3
T
26
2
C
A
12/-
10/-
-
A
A
C
C
A
3
A
C
2
4
G
G
C/17
G/7
C
T
4/-
2/-
C
4/3
C
T
2
C
6/-
4/-
-
A
A
-
-
4/-
2/-
T
C
3
4/-
T
G
-
C
-
-
A
T
A
T
T
C
T
C
-
-
G
C/-
-
-
C
A
A
T
-
T
T
T
C
G
A
5
-
G
A
T
G/7
A
G
-
T
C
G
C
A
G
C
G
A
C
A
A
C
20/-
-
G
-
A
T
T
T
T
A
G
G
G
C
T
G
C
T
4
C
A
G
13
T
G
T
4
4/-
2/-
T
G
G
T
C
G
G
A
A
G
-
-
C
-
G
-
T
44/-
G
2
G
5
T
T
C
A
C
G
C
A
C
G
C
A
G
T
A
T
A
G
T
A
G
C
T
C
C
T
G
2
G
A
C
T
-
2
A
-
-
C
C
A
G
A
A
A
-
A
G
T
T
-
-
3
-
-
T
-
-
2
A/-
A
15
G
C
G
A
T
G
G
-
3
4
C
G
G
C
T
C
A
T
T
C
-
-
T
G
-
A
10
T
5
16
18
A
T
-
T
A
C
A
-
-
5
G
C
9/-
8/-
T
A
A
A
C
C
T
A