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  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 199,653 (bp)   Positions: 309
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
F344/NCrl (KNAW) 
.126
.098
.002
.029
.001
.01
.028
.141
.016
.008
.964
--
.059
.336
.044
.356
.082
.075
.937
.018
.004
.034
.026
.067
.01
.176
.178
.016
.997
.003
.088
.027
.004
--
.075
.021
--
--
.209
.031
.003
.048
.001
.001
.023
1.0
.461
.001
.087
.037
.022
.338
--
.002
.0
.059
.003
.005
.249
.005
.005
.023
.016
.018
.005
.0
.0
.0
.015
.148
.035
.548
.007
.01
.01
.001
.015
.016
.009
.994
--
--
--
.298
.004
.998
.001
.001
.001
.492
.06
.028
--
.006
.019
.0
.302
.001
.001
.002
.996
.043
.001
.031
.107
.02
.051
--
--
--
--
--
--
--
--
--
.287
.079
.02
.185
.036
.028
.0
.002
.076
.043
--
--
--
.532
.04
.038
.016
.0
.002
.486
.008
--
.329
.215
.002
.207
.001
.002
.068
.0
.014
.011
.011
.0
1.0
.047
.001
.954
.0
.125
.084
.06
.968
.003
.013
.002
.345
.371
.389
.41
.0
.0
.055
.063
.04
.104
.484
.099
--
--
.053
.06
.008
.013
.009
--
--
--
--
--
--
.007
.063
.004
.0
.006
.004
.851
.329
.338
.368
.0
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.513
.927
.002
--
--
--
--
--
--
--
--
.005
.007
.101
--
--
--
--
--
--
--
--
--
--
--
--
.28
.009
.044
.001
.094
.999
.997
.18
.88
.124
--
.026
.001
.005
.019
.077
.166
.034
.067
.001
.004
.007
.001
.004
.0
.998
.001
.005
.005
.016
.039
.002
.003
.076
--
--
.06
.091
.587
.503
.36
.016
.036
.0
.003
.002
.0
.04
.001
.898
.015
.435
.075
.003
.001
.002
.011
.008
.016
.0
.007
.006
.001
.0
.0
Herc2
Herc2
Herc2
Herc2
Herc2
Herc2
Herc2
Herc2
Herc2
Herc2
Herc2
Herc2
Herc2
Herc2
Herc2
Herc2
Herc2
Herc2
Herc2
Herc2
Herc2
Herc2
Herc2
Herc2
Herc2
Herc2
Herc2
Herc2
Herc2
Herc2
Herc2
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--
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--
--
--
--
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--
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--
--
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--
--
--
--
--
--
--
--
--
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--
--
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--
--
--
--
--
--
--
--
--
--
--
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--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
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--
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--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
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--
--
--
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--
--
--
--
--
--
--
--
--
--
--
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--
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--
--
--
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--
--
--
--
--
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--
--
--
--
--
--
--
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--
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--
--
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--
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--
--
--
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--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
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--
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--
--
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--
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--
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--
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--
--
--
--
--
--
--
T
T
C
A
T
G
16
G
C
G
A
G
A
C
G
T
C
T
A
14
G
G
G
8
T
C
A
C
C
C
C
G
G
5
2
3
3
2
G
G
T
T
G
G
T
T
A
T
A
C
C
C
T
G
T
G
C
8
G
A
G
A
8
G
A
A
A
T
G
G
C
A
24
22
T
G
A
G
G
C
C
T
T
C
G
C
T
G
A
2
A
C
4
G
G
G
C
C
C
T
A
T
C
C
G
3
T
A
A
A
T
T
G
C
C
G
C
A
C
G
A
T
G
G
G
T
A
G
T
A
2
A
C
A
C
116
A
T
G
T
C
G
A
C
T
G
A
T
C
C
C
T
G
T
T
C
T
T
T
G
A
T
4
A
A
A
A
T
T
3
8
T
G
C
C
A
2
3
A
C
A
C
C
5
A
G
G
G
A
T
A
A
T
G
2
A
A
5
T
C
G
T
T
T
5
G
G
T
C
A
A
T
C
T
T
7
4
T
G
G
A
C
A
A
A
G
T
2
3
A
C
T
T
G
T
G
A
A
2
T
T
C
C
T
T
G
C
C
G
C
T
T
C
C
A
C
C
A
A
G
T
A
G
6
4
2
T
G
T
T
2
A
T
A
A
A
A
C
71
A
4
A
T
G
A
29
2
T
A
A
16
T
C
T
A
G
A
A
A
A
C
T
A
T
2
A
T
C
A
  115,460,136
  115,460,143
  115,461,267
  115,461,705
  115,462,239
  115,462,876
  115,462,948
  115,463,641
  115,463,787
  115,463,981
  115,464,362
  115,465,290
  115,466,490
  115,466,670
  115,467,485
  115,468,091
  115,472,123
  115,472,124
  115,475,976
  115,476,384
  115,476,783
  115,477,202
  115,477,724
  115,478,243
  115,478,857
  115,479,263
  115,480,150
  115,481,282
  115,481,622
  115,483,163
  115,483,505
  115,485,172
  115,485,491
  115,485,672
  115,486,483
  115,486,753
  115,487,652
  115,487,653
  115,487,979
  115,488,250
  115,490,273
  115,490,541
  115,490,782
  115,490,827
  115,490,926
  115,491,131
  115,492,290
  115,492,604
  115,493,911
  115,493,921
  115,493,925
  115,494,122
  115,497,503
  115,498,616
  115,499,261
  115,499,454
  115,499,962
  115,501,397
  115,501,647
  115,502,121
  115,503,079
  115,503,621
  115,503,622
  115,503,877
  115,503,951
  115,504,522
  115,504,830
  115,504,836
  115,505,716
  115,505,876
  115,506,046
  115,507,000
  115,507,129
  115,507,131
  115,507,488
  115,507,526
  115,507,547
  115,507,549
  115,508,023
  115,508,600
  115,509,285
  115,509,286
  115,509,311
  115,510,758
  115,512,266
  115,512,603
  115,513,430
  115,513,455
  115,513,506
  115,514,615
  115,514,864
  115,515,430
  115,515,861
  115,516,060
  115,516,133
  115,516,259
  115,516,816
  115,517,760
  115,517,779
  115,518,308
  115,518,686
  115,519,022
  115,519,588
  115,521,033
  115,521,079
  115,521,476
  115,522,328
  115,522,378
  115,522,967
  115,523,213
  115,523,773
  115,524,912
  115,524,919
  115,531,402
  115,531,480
  115,531,500
  115,531,746
  115,531,803
  115,531,895
  115,532,047
  115,532,360
  115,532,361
  115,533,879
  115,536,875
  115,537,981
  115,537,994
  115,539,209
  115,539,311
  115,540,111
  115,540,698
  115,541,580
  115,541,581
  115,542,728
  115,543,010
  115,543,335
  115,543,475
  115,543,787
  115,545,033
  115,546,086
  115,546,813
  115,547,413
  115,547,688
  115,548,174
  115,548,217
  115,549,836
  115,551,030
  115,552,785
  115,553,218
  115,553,680
  115,554,579
  115,556,569
  115,557,235
  115,558,625
  115,558,966
  115,559,997
  115,560,499
  115,561,240
  115,561,243
  115,563,246
  115,563,970
  115,564,984
  115,565,529
  115,566,333
  115,566,344
  115,566,350
  115,566,356
  115,568,816
  115,570,295
  115,572,464
  115,572,466
  115,573,404
  115,573,501
  115,573,728
  115,574,489
  115,574,924
  115,574,925
  115,575,285
  115,575,352
  115,576,396
  115,577,343
  115,579,602
  115,580,462
  115,580,688
  115,581,822
  115,581,928
  115,582,529
  115,582,691
  115,584,524
  115,585,134
  115,585,464
  115,586,552
  115,587,708
  115,588,372
  115,588,589
  115,588,986
  115,588,987
  115,589,030
  115,589,357
  115,589,410
  115,591,848
  115,592,214
  115,592,340
  115,593,021
  115,593,106
  115,593,455
  115,593,692
  115,594,628
  115,594,967
  115,594,983
  115,595,003
  115,595,033
  115,595,042
  115,595,538
  115,597,669
  115,600,671
  115,601,332
  115,601,335
  115,602,173
  115,602,611
  115,602,981
  115,603,891
  115,605,637
  115,605,642
  115,605,702
  115,605,773
  115,605,960
  115,606,055
  115,611,109
  115,611,197
  115,611,940
  115,611,973
  115,612,476
  115,612,607
  115,612,612
  115,612,788
  115,612,851
  115,614,414
  115,615,402
  115,615,404
  115,616,149
  115,616,157
  115,616,920
  115,616,927
  115,617,280
  115,618,191
  115,618,465
  115,618,969
  115,619,316
  115,619,465
  115,619,745
  115,619,756
  115,620,079
  115,620,789
  115,621,038
  115,621,376
  115,622,730
  115,622,865
  115,622,868
  115,623,085
  115,624,055
  115,624,114
  115,626,770
  115,628,057
  115,629,567
  115,629,569
  115,629,571
  115,630,060
  115,630,889
  115,632,362
  115,632,647
  115,633,724
  115,634,334
  115,634,335
  115,635,437
  115,636,000
  115,636,426
  115,636,579
  115,636,893
  115,637,531
  115,637,726
  115,638,804
  115,638,855
  115,638,994
  115,639,008
  115,639,057
  115,639,210
  115,639,671
  115,640,559
  115,640,996
  115,641,122
  115,642,276
  115,642,916
  115,642,995
  115,643,107
  115,643,648
  115,644,083
  115,644,582
  115,646,160
  115,650,118
  115,652,515
  115,652,889
  115,652,890
  115,652,901
  115,654,892
  115,656,585
  115,656,586
  115,657,498
  115,657,501
  115,657,729
-
G
A
G
13/11
A
-
A
G
T
G
A
-
T
A
C
A
A
17
-
C
4
A
8/-
G
T
A/3
G
G
G
T
31/21
A
5/-
-
-
3/-
2/-
C
C
C
C
T
9
C
C
G
C
3
G
G
2
-
A
C
A
C/3
-
GT/3
G
2
A/9
-
A
G
G
G
C
A
A
9/11
T
24/-
22/-
-
T
T
2
A
T
C/-
T/-
-
A
A
T
C
T
G
2/-
-
T
-
C
A
T
T
A
2
C
C
C
G
A
A
-
-
G
G
G
C
C
4/3
G
C/2
2
T
4
G
C
A/2
T/-
A
A
T
C
G
C
4
G
2/-
-
2
G
G
-
G
G
A
-
3
T
3
3
C
2
C
C
T
T
T
C
C
2
C
A
2
2
G
A
G
C
-
G
G
G
G
C
-
-
-
T/-
A
C/3
3
A/-
-
-
G
T
G
-
G
5/-
G
8
T
2
T
T/3
G
5
C
C
2/-
A/-
C
-
C
T
C
7
11
9
-
A
A
C
T
G
G
C
T
C
T/7
7/-
4/-
A
A
T
T
T
C
C
G
A
65
-
-
C
G
C
A
A
G
A
G
3
-
C
C
2
2
C
G
A
A
T
6/5
T
C
C
T
T
-
T
-
T
G
A
3
G
A
6/-
4/-
2/-
C
3
T/5
C
-
2
T/-
G
G
G
G
T
-
-
-
G
C
A
G
-
-
-
G
6
-
G
T
G
G
C
T
3
G
-
2
A
G
A
-
A/-
C
T
G