Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 32,836 (bp)   Positions: 133
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
ACI/EurMcwi (KNAW) 
.128
.004
.032
.044
.046
.011
.078
--
--
--
--
--
.483
.007
.232
.315
.197
.047
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.176
.018
.029
.695
.061
.336
.324
.002
.016
.065
.072
--
.095
.005
.086
.007
.006
.001
.002
.011
.293
.052
.14
.225
.325
.373
.363
.378
.171
.291
.004
.021
--
--
.289
.206
.011
--
--
--
--
.005
--
--
.293
.11
--
.01
.002
.002
.005
.23
--
--
.94
.005
.126
.071
.0
.031
.001
.006
.139
.002
.004
.775
Glyatl2
Glyatl2
Glyatl2
Glyatl2
Glyatl2
Glyatl2
Glyatl2
Glyatl2
Glyatl2
Glyatl2
Glyatl2
Glyatl2
Glyatl2
Glyatl2
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
2
A
G
A
C
T
T
A
C
T
A
A
G
C
T
C
C
G
A
G
C
T
C
A
G
A
A
G
C
T
C
C
G
T
T
T
A
G
T
C
C
G
A
G
T
C
C
T
T
A
A
G
G
C
G
G
T
A
G
C
A
C
7
G
C
G
C
G
A
C
T
C
G
T
A
G
3
4
T
T
T
A
A
A
G
G
T
T
A
G
G
A
C
G
C
C
C
T
A
T
T
4
G
T
T
C
C
T
T
A
T
C
C
G
C
G
A
G
C
T
A
A
A
A
2
C
G
G
A
A
A
C
G
  236,673,448
  236,673,577
  236,673,724
  236,673,927
  236,673,934
  236,674,297
  236,674,312
  236,674,618
  236,674,627
  236,674,710
  236,674,746
  236,674,960
  236,675,097
  236,675,151
  236,675,299
  236,675,363
  236,675,367
  236,675,370
  236,675,382
  236,675,438
  236,675,953
  236,676,194
  236,676,435
  236,676,580
  236,676,600
  236,677,120
  236,677,177
  236,677,218
  236,677,350
  236,677,362
  236,677,567
  236,677,792
  236,677,827
  236,677,894
  236,677,934
  236,678,020
  236,678,031
  236,678,443
  236,678,490
  236,678,517
  236,678,766
  236,679,106
  236,679,153
  236,679,319
  236,679,583
  236,679,628
  236,679,634
  236,679,711
  236,679,713
  236,679,717
  236,679,751
  236,679,817
  236,679,838
  236,679,856
  236,679,992
  236,680,043
  236,680,111
  236,680,179
  236,680,845
  236,680,849
  236,680,900
  236,681,139
  236,681,518
  236,681,758
  236,681,793
  236,681,832
  236,681,924
  236,682,014
  236,682,138
  236,682,316
  236,682,422
  236,682,618
  236,683,018
  236,683,024
  236,683,126
  236,683,305
  236,683,461
  236,683,500
  236,683,541
  236,683,787
  236,684,180
  236,684,261
  236,684,469
  236,684,630
  236,684,648
  236,684,649
  236,685,011
  236,685,119
  236,685,224
  236,685,253
  236,685,259
  236,685,266
  236,685,278
  236,685,581
  236,685,969
  236,686,201
  236,686,266
  236,686,541
  236,687,021
  236,687,097
  236,687,218
  236,687,795
  236,687,805
  236,687,973
  236,688,187
  236,688,962
  236,690,034
  236,690,331
  236,690,891
  236,691,293
  236,691,418
  236,691,726
  236,691,770
  236,696,482
  236,696,994
  236,697,448
  236,697,672
  236,697,674
  236,697,942
  236,699,647
  236,699,896
  236,700,375
  236,701,288
  236,701,583
  236,701,602
  236,701,890
  236,701,955
  236,702,113
  236,702,652
  236,703,358
  236,704,162
  236,704,666
  236,704,993
2/-
G
A
T
T
C
-
-
A
4
G
G
A
T
-
2
T
T
C
A
T
A
T
C
T
G
G
A
T
A
T
G
T
C
C
C
C
A
G
A
T
G/4
G
A
G
T
T
C
C
C
8
C
A
T
A
A
A
G
A
T
2
T
-
A
T
A
T
C
G
T
C
T
T
C
G
A
-
4/-
A
A
C
G
G
G
C
A
C
G
G
A
A
G
-
A
10
A
A
C
G
C
2
-
T
C
T/7
G
T
4
-
2
G
T
A
C
T
A
C
A
T
C
G
G
G
5
-
-
T
A
G
G
G
15/19
C